Team:Paris/Transduction overview

From 2009.igem.org

(Difference between revisions)
(→reference)
(→References)
Line 43: Line 43:
====References====
====References====
<ol class="references">
<ol class="references">
-
<li> [[Team:Paris/Transduction_overview#1 | ^]] - [http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=179564 179564]</li>
+
<li> [[Team:Paris/Transduction_overview#1 | 1]] D-ribose metabolism in Escherichia coli K-12: genetics, regulation, and transport. Lopilato JE & Beckwith JR. 1984 -  [http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=179564 179564]</li>
-
<li> [[Team:Paris/Transduction_overview#2 | ^]]The Tol-Pal proteins of the Escherichia coli cell envelope an energized system required for outer membrane integrity. Lloubès & Journet 2001 - [http://www.ncbi.nlm.nih.gov/pubmed/11501670 11501670]</li>
+
<li> [[Team:Paris/Transduction_overview#2 | 2]] Signal transfer through three compartments: transcription initiation of the Escherichia coli ferric citrate transport system from the cell surface. Härle C & Braun V. 1995 - [http://www.ncbi.nlm.nih.gov/pubmed/11501670 11501670]</li>
-
<li> [[Team:Paris/Transduction_overview#3 | ^]]Improved methods for producing outer membrane vesicles in gram-negative bacteria. Henry & Lloubès 2004 - [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#3 | 3]] A comparative analysis of ABC transporters in complete microbial genomes. Tomii K & Kanehisa M. 1998- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#4 | 4]] The CpxRA signal transduction system of Escherichia coli: growth-related autoactivation and control of unanticipated target operons.De Wulf P & Lin EC.  1999 - [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#5 | 5]] Two-component signal transduction. Stock AM & Goudreau PN. 2000- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#6 | 6]] Vesicle-mediated transfer of virulence genes from Escherichia coli O157:H7 to other enteric bacteria. Yaron S & Matthews KR. 2000- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#7 | 7]] Periplasmic binding proteins: a versatile superfamily for protein engineering. Dwyer MA & Hellinga HW. 2004- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#8 | 8]] Gene regulation by transmembrane signaling. Braun V & Sauter A. 2006- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#9 | 9]] Signal transduction: networks and integrated circuits in bacterial cognition. Baker MD & Stock JB 2007- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#10 | 10]] Systems biology of bacterial chemotaxis. Baker MD & Stock JB. 2007- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#11 | 11]] Control of the transcription of a short gene encoding a cyclic peptide in Streptococcus thermophilus: a new quorum-sensing system? Ibrahim M & Monnet V. 2007- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#12 | 12]] SRP and Sec pathway leader peptides for antibody phage display and antibody fragment production in E. coli. Thie H & Hust M. 2008- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#13 | 13]] Signal transduction and adaptive regulation through bacterial two-component systems: the Escherichia coli AtoSC paradigm. Kyriakidis DA & Tiligada E. 2009- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
<li> [[Team:Paris/Transduction_overview#14 | 14]] comparative analysis of ABC transporter. Tomii & Kanehisa 2009- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
 +
 
 +
 
</ol>
</ol>
-
#1995- Cosima Harle & Volkmar Braun - Signal transfer through three compartments transcription initiation of the Escherichia coiferric  citrate transport system from the cell surface
+
 
-
#2000 - Stock & Goudreau – Two-component signal  transduction
+
[] 1984 6327616
-
#2001 - Mishima & Murata - Super-channel in bacteria  function and structure of the macromolecule import system mediated by a pit-dependent ABC transporter
+
[] 1995 7729419
-
#2009 - Akyriakidis & Tiligada – signal transduction TCS  the AtoSC paradigm
+
[] 1998 9799792
-
#2009 - Tomii & Kanehisa – comparative analysis of ABC transporter
+
[] 1999         10542180
 +
[] 2000 10966457
 +
[] 2000 11010892
 +
[] 2004 15313245
 +
[] 2006 16718597
 +
[] 2007 18054766
 +
[] 2007 16529985
 +
[] 2007 17921293
 +
[] 2008 18504019
 +
[] 2009 19198978
 +
 
 +
 
 +
#2009 - –

Revision as of 15:49, 3 September 2009

iGEM > Paris > Reception > Overview

Overview

Introduction

- to enable gene transcription after fusionning OMVs with the outer membrane of the receiving bacterium.


We also hope that we could achieve this aim without sacrifying important proprieties of our message : specific, repeatable , multidirectional. It seems that we have two possible ways : the ABC transporters or the two component systems . ABC transporters and two component systems are natural transport system (export or import) of information, nutriments or toxines.


There is another possibility but the mecanism is mostly unknown : the DNA-containing OMVs which could be a useful mean of information transport.

References

  1. 1 D-ribose metabolism in Escherichia coli K-12: genetics, regulation, and transport. Lopilato JE & Beckwith JR. 1984 - 179564
  2. 2 Signal transfer through three compartments: transcription initiation of the Escherichia coli ferric citrate transport system from the cell surface. Härle C & Braun V. 1995 - 11501670
  3. 3 A comparative analysis of ABC transporters in complete microbial genomes. Tomii K & Kanehisa M. 1998- 15249060
  4. 4 The CpxRA signal transduction system of Escherichia coli: growth-related autoactivation and control of unanticipated target operons.De Wulf P & Lin EC. 1999 - 15249060
  5. 5 Two-component signal transduction. Stock AM & Goudreau PN. 2000- 15249060
  6. 6 Vesicle-mediated transfer of virulence genes from Escherichia coli O157:H7 to other enteric bacteria. Yaron S & Matthews KR. 2000- 15249060
  7. 7 Periplasmic binding proteins: a versatile superfamily for protein engineering. Dwyer MA & Hellinga HW. 2004- 15249060
  8. 8 Gene regulation by transmembrane signaling. Braun V & Sauter A. 2006- 15249060
  9. 9 Signal transduction: networks and integrated circuits in bacterial cognition. Baker MD & Stock JB 2007- 15249060
  10. 10 Systems biology of bacterial chemotaxis. Baker MD & Stock JB. 2007- 15249060
  11. 11 Control of the transcription of a short gene encoding a cyclic peptide in Streptococcus thermophilus: a new quorum-sensing system? Ibrahim M & Monnet V. 2007- 15249060
  12. 12 SRP and Sec pathway leader peptides for antibody phage display and antibody fragment production in E. coli. Thie H & Hust M. 2008- 15249060
  13. 13 Signal transduction and adaptive regulation through bacterial two-component systems: the Escherichia coli AtoSC paradigm. Kyriakidis DA & Tiligada E. 2009- 15249060
  14. 14 comparative analysis of ABC transporter. Tomii & Kanehisa 2009- 15249060




[] 1984 6327616 [] 1995 7729419 [] 1998 9799792 [] 1999 10542180 [] 2000 10966457 [] 2000 11010892 [] 2004 15313245 [] 2006 16718597 [] 2007 18054766 [] 2007 16529985 [] 2007 17921293 [] 2008 18504019 [] 2009 19198978


  1. 2009 - –

Retrieved from "http://2009.igem.org/Team:Paris/Transduction_overview"