Team:SDU-Denmark/Team

From 2009.igem.org

(Difference between revisions)
Line 7: Line 7:
[[Team:SDU-Denmark/Diary|Diary]] | [[Team:SDU-Denmark/Protocols|Protocols]] | [[Team:SDU-Denmark/Downloads|Downloads]] | [[Team:SDU-Denmark/Brainstorm|Brainstorm]]
[[Team:SDU-Denmark/Diary|Diary]] | [[Team:SDU-Denmark/Protocols|Protocols]] | [[Team:SDU-Denmark/Downloads|Downloads]] | [[Team:SDU-Denmark/Brainstorm|Brainstorm]]
-
 
-
 
-
'''Brainstorm:'''
 
-
 
-
 
-
 
-
'''Forslag til opbygning:'''
 
Line 23: Line 16:
====Students====
====Students====
-
=====Anna Linhardt Hansen=====
+
{|cellspacing="0" cellpadding="0"|
-
 
+
|valign='top'|
-
[[Image:SDU-Denmark-profil-anna.jpg|100px|thumb|left| Anna Hansen.]]
+
 +
===Anna Linhardt Hansen===
 +
{|width=375px
 +
|valign='top'|[[Image:SDU-Denmark-profil-anna.jpg|100px|thumb|left| Anna Hansen.]]
 +
|
I am studying medicine on 5th semester at the University of Southern Denmark, and my motivation for joining SDU´s iGEM is numerous. First of all, studying medicine does not prepare the ground for scientific work, which I think is a petty. Second, I think its cool to make friends among different field of study. Third, but presumably most important; I would like to have some fun.
I am studying medicine on 5th semester at the University of Southern Denmark, and my motivation for joining SDU´s iGEM is numerous. First of all, studying medicine does not prepare the ground for scientific work, which I think is a petty. Second, I think its cool to make friends among different field of study. Third, but presumably most important; I would like to have some fun.
 +
|}
 +
|width=40px|
 +
|valign='top' width=375px|
-
 
+
===Julius Fredens===
-
 
+
{|
-
 
+
|valign='top'|
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
=====Julius Fredens=====
+
-
 
+
[[Image:SDU-Denmark-profil-Julius.jpg|100px|thumb|left| Julius Fredens.]]
[[Image:SDU-Denmark-profil-Julius.jpg|100px|thumb|left| Julius Fredens.]]
-
 
+
|valign='top' |
I’m 24 and I study Biochemistry and Molecular Biology at 8th semester. Although spending a lot of time in the lab doing projects on lipid metabolism in C. elegans and protein modifications in nerve terminals, I have never been in touch with genetic engineering or even worked with single-celled organisms.
I’m 24 and I study Biochemistry and Molecular Biology at 8th semester. Although spending a lot of time in the lab doing projects on lipid metabolism in C. elegans and protein modifications in nerve terminals, I have never been in touch with genetic engineering or even worked with single-celled organisms.
When I think about all the opportunities in genetic manipulation, I can’t live without knowing the techniques. And learning this discipline by hands-on experiences together with a great team – in competition with others ;o) – sounds just pretty nice!
When I think about all the opportunities in genetic manipulation, I can’t live without knowing the techniques. And learning this discipline by hands-on experiences together with a great team – in competition with others ;o) – sounds just pretty nice!
 +
|}
 +
|-
 +
|valign='top'|
 +
==BioBrick™ Tools & The Registry==
 +
{|
 +
|valign='top'|
 +
[http://partsregistry.org/wiki/index.php?title=Help:BioBrick_Tools http://partsregistry.org/wiki/images/9/93/Toolman.png]
 +
|width=300px valign='top'|
 +
An overview of the Registry's computational tools and how one may go about using them as they look to design and develop parts, device and systems.
 +
*[[Help:Toolbox Overview | Toolbox Overview]]
 +
*[[Help:Sandbox Overview | Sandbox Overview]] 
 +
*[[Tutorial:Adding a Basic Part|Tutorial: How to add a basic BioBrick]]
 +
*[[Help:Standardization|Making BioBrick DNA]]
 +
*[[Registry_API|Registry API for Software Developers]]
 +
|}
 +
|width=40px|
 +
|valign='top'|
 +
==At the Bench==
 +
{|
 +
|valign='top'|
 +
[http://partsregistry.org/wiki/index.php?title=Help:At_the_Bench http://partsregistry.org/wiki/images/f/f7/Bench.png]
 +
|
 +
Overview & links on how to physically assembly BioBricks
 +
*[http://openwetware.org/wiki/BioBricks_construction_tutorial How to perform a construction] - A step by step tutorial detailing one method of making [[Help:BioBrick Assembly|Biobrick assemblies]]
 +
*[http://openwetware.org/wiki/Protocols Open Wetware Protocols] are available for a number of biological procedures
 +
*[[Help:Equipment|What we're using to produce the standardized parts distributed for the competition]]
 +
|}
 +
|-
 +
|valign='top'|
 +
==DNA Part Repositories==
 +
{|valign'top'|
 +
|[http://partsregistry.org/wiki/index.php?title=Help:Physical_DNA http://partsregistry.org/images/iGEM_buttons/Buttondna.gif]
 +
|valign'top'|
 +
*[[Help:iGEM_09_DNA_distribution|Information about the 2009 Parts Kit]]
 +
*'''<span style="color:red; font-weight:bold; font-size:115%;">NEW:</span>''' [[Help:Plasmid_Backbone_Availability_2009|Plasmid Backbone Availability 2009]]
 +
*'''<span style="color:red; font-weight:bold; font-size:115%;">NEW:</span>''' [[Help:Requesting_Parts_2009|Requesting Parts 2009]]
 +
*[[Help:Transformation_Protocol|Transforming Competent Cells]]
 +
*[[Help:Construction_Plasmid|Construction Plasmids]]
 +
*[[Help:Sequencing Tool:Automatic Assessment Algorithm|Automatic Sequencing Algorithm]]
 +
*[[Help:How to check a part|How to check if a part is correct]]
 +
**[[Help:Sequence_Analysis_Instructions|How to read sequence analyses]]
 +
**[[Help:Reading Gel Images|How to read gel images]]
 +
*[[Help:Shipping Stabs|Shipping times for stabs]]
 +
*[[Help:Repositories:More | More...]]
 +
|}
 +
|width=40px|
 +
|valign='top'|
-
 
+
==Users & Groups==
-
=====Kir Jacobsen=====
+
{|
-
 
+
|valign='top'|
-
[[Image:SDU-Denmark-profil-Kir.jpg|100px|thumb|left| Kir Jacobsen.]]
+
[http://partsregistry.org/wiki/index.php?title=Help:Users_and_Groups http://partsregistry.org/wiki/images/3/31/Users_and_groups_72px_icon.png]
-
 
+
|
-
9th semester Biochemistry & Molecular biology, 24, experience with cell culturing, protein purification with focus on phosphoproteins and mass spectrometry. Additionally, experience with purification of DNA from tissue and copy number surveillance.
+
Registry Users & groups overview
-
 
+
*[[Help: Registry Accounts|How to make Registry Accounts]]
-
I always seek new areas of study, because I find the world of life sciences very exciting. When the opportunity came up to do something with bacteria, I was interested right from the start, because I havent really worked in the area of prokaryotes before and I was eager to explore it.
+
*[http://parts.mit.edu/wiki/index.php/Help:Wiki How to edit a Wiki]
-
 
+
*[[Help: Partinfo Tag|Including Part Information on your wiki page]]
-
 
+
*[[Help: Editing Experience|Editing Part experience]]
-
 
+
*[[Help: Single Login System|Single login system for iGEM and the Registry]]
-
 
+
-
 
+
-
 
+
-
=====John Claesson=====
+
-
 
+
-
=====Anne Zebitz Eriksen=====
+
-
[[Image:SDU-Denmark-profil-Anne.JPG|100px|thumb|left|Anne Zebitz Eriksen.]]
+
-
 
+
-
I am 20 years old and I have just finished my first year of the nanobioscience bachelor. I have great experience in project-management from the technical high school, but have very little previous experience with the microbiology lab.
+
-
I joined the iGEM team because I always thought genetically engineering to be exciting and to gain valuable experience in this line of work. And mostly because it sounds fun.
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
=====Marc Trunjer Kusk Nielsen=====
+
-
 
+
-
My name is Marc, im 21 years old and i've just finished the 3rd semester of Medicine. I have a broad, but superficial experience in labwork, but it's been a couple of years, and i miss it. Im really looking forward to retaking the lab and building a Staph dissolving bastard of a bacteria :)
+
-
 
+
-
 
+
-
=====Helle Bogetofte Thomasen=====
+
-
 
+
-
[[Image:SDU-Denmark-profil-Helle.JPG|100px|thumb|left|Helle Bogetofte Thomasen.]]
+
-
 
+
-
My name is Helle Bogetofte Thomasen, I am 23 years old and have just finished 5th semester of medicin at SDU.
+
-
Regarding my motivation; I generally think that syntetic biology is a very interesting scientific field with great potentiel and I really look forward to joining the competition and meeting students from all over the world.
+
-
I would like to work in medical research later on but our education doesn't really involve any lab work. So for me this iGEM project is also a great chance to get some lab experience and try some things that I would otherwise only read about. Beside from this I am strangely fascinated by bacteria ;o)
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
=====Mike Barnkob=====
+
-
 
+
-
[[Image:SDU-Denmark-profil-Mike.JPG|100px|thumb|left| Mike Barnkob.]]
+
-
 
+
-
Motivation: I found synthetic biology to be an exciting new field to explore. It has a lot of potential for real world applications and iGEM provides a perfect setup for us students to wrestle with new ideas and projects.
+
-
 
+
-
About me: I study medicine and am currently on my sixth semester here at SDU. I've worked on detecting LOH in a rare cancer called multiple self-healing squamous epithelioma at Odense University Hospital and spent some time at University of Illinois a summer ago trying to be helpful at Kelly Tappendens lab. My bachelor thesis had the inspiring name: A Systematic Comparison of Cystatin C Based Formula's and The Creatinin Based Schwartz Formula for Determining Kidney Functions in Children.
+
-
 
+
-
====Advisors====
+
-
 
+
-
 
+
-
=====Ann Zahle Andersen=====
+
-
 
+
-
[[Image:SDU-Denmark-profil-Ann.JPG|100px|thumb|left| Ann Zahle Andersen.]]
+
-
 
+
-
I am a post.doc at the microbiology group of the department of biochemistry and molecular biology at SDU. I have a past I systems biology and mathematical modeling, but am currently researching in the field of food microbiology.
+
-
 
+
-
I was introduced to the iGEM team in May and immediately saw great potential. Therefore I am truly honored to be an instructor on their project and look forward to lots of fun and good science over the summer.
+
-
 
+
 +
|}
 +
|}
 +
----
 +
==Help: Glossary==
 +
[[Image:glossary.jpg]]
 +
[[Help:Glossary| A compedium and index of terms found in the Registry and synthetic biology indexed alphabetically]]
-
=====Martin Hanczyc=====
 
-
=====Jakob Møller-Jensen=====
+
==Help: Under Construction==  
-
=====Steen Rasmussen=====
+
-
=====Birgitte Kallipolitis=====
+
 +
These documentation seeds are not yet complete...
 +
{|
 +
|
 +
*[[Help: Registry 2.0|Registry 2.0 Ideas]] - Ideas and discussion of how the Registry should change at the end of 2006.
 +
*[[Help: Part Categories|Part Categories]]
 +
*[[Help: Part Versions|Part Versions]]
 +
*[[Help:Starting Wet-lab]]
 +
*[[Registry graphics gallery]]
 +
||
 +
*[[Help: Twins|Twins]]
 +
*[http://partsregistry.org/cgi/htdocs/registry.cgi Old About the Registry]
 +
*[http://partsregistry.org/cgi/htdocs/AbstractionHierarchy/index.cgi Parts, Devices & Systems]
 +
*[[Help:BioBrick Design|BioBrick Design]]
 +
*[[Tutorial:Adding a BioBrick Composite Part|Composite Part Tutorial]]
 +
|}

Revision as of 11:51, 29 July 2009


Home | Background | Project | Parts | Team

Diary | Protocols | Downloads | Brainstorm



Contents

Who we are

We are eight students from the University of Southern Denmark (SDU), who found each other through a common wish to explore synthetic biology.

Students

Anna Linhardt Hansen

Anna Hansen.

I am studying medicine on 5th semester at the University of Southern Denmark, and my motivation for joining SDU´s iGEM is numerous. First of all, studying medicine does not prepare the ground for scientific work, which I think is a petty. Second, I think its cool to make friends among different field of study. Third, but presumably most important; I would like to have some fun.

Julius Fredens

Julius Fredens.

I’m 24 and I study Biochemistry and Molecular Biology at 8th semester. Although spending a lot of time in the lab doing projects on lipid metabolism in C. elegans and protein modifications in nerve terminals, I have never been in touch with genetic engineering or even worked with single-celled organisms.

When I think about all the opportunities in genetic manipulation, I can’t live without knowing the techniques. And learning this discipline by hands-on experiences together with a great team – in competition with others ;o) – sounds just pretty nice!

BioBrick™ Tools & The Registry

Toolman.png

An overview of the Registry's computational tools and how one may go about using them as they look to design and develop parts, device and systems.

At the Bench

Bench.png

Overview & links on how to physically assembly BioBricks

DNA Part Repositories

Buttondna.gif

Users & Groups

Users_and_groups_72px_icon.png

Registry Users & groups overview



Help: Glossary

File:Glossary.jpg A compedium and index of terms found in the Registry and synthetic biology indexed alphabetically


Help: Under Construction

These documentation seeds are not yet complete...




What we did

(Provide proper attribution for all work)


Where we're from

We are all from the University of Southern Denmark in Odense, which is located smack in the middle of Denmark. It's a small town of about 180.000 inhabitants, of which quiet a few are students.