Team:TUDelft/Modeling
From 2009.igem.org
(Difference between revisions)
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==Mathematical Modeling== | ==Mathematical Modeling== | ||
The Negative Feedforward model shown above can be expressed with the following set of ODEs (ordinary differential equations):<br> | The Negative Feedforward model shown above can be expressed with the following set of ODEs (ordinary differential equations):<br> | ||
- | [[Image:negative_feedforward_ODEs_2.jpg]]<br> | + | [[Image:negative_feedforward_ODEs_2.jpg]]<br><br> |
The Riboregulator model shown above can be expressed with the following set of ODEs:<br> | The Riboregulator model shown above can be expressed with the following set of ODEs:<br> | ||
- | [[Image:riboregulator_ODEs.jpg]]<br> | + | [[Image:riboregulator_ODEs.jpg]]<br><br> |
The symbols in this system of equations are found in the table below:<br> | The symbols in this system of equations are found in the table below:<br> | ||
- | [[Image:symbols_table.jpg]]<br> | + | [[Image:symbols_table.jpg]]<br><br> |
We would like to give credit to the [https://2008.igem.org/Team:Bologna/Modeling Bologna '08 team] and [https://2008.igem.org/Team:UNIPV-Pavia/Modeling UNIPV-Pavia '08 team], who's project was useful in determining our own equations. | We would like to give credit to the [https://2008.igem.org/Team:Bologna/Modeling Bologna '08 team] and [https://2008.igem.org/Team:UNIPV-Pavia/Modeling UNIPV-Pavia '08 team], who's project was useful in determining our own equations. | ||
='''Conjugation'''= | ='''Conjugation'''= |
Revision as of 12:06, 20 July 2009
Delay Device
Figure 1: Negative Feedforward model
Figure 2: Riboregulator model
Mathematical Modeling
The Negative Feedforward model shown above can be expressed with the following set of ODEs (ordinary differential equations):
The Riboregulator model shown above can be expressed with the following set of ODEs:
The symbols in this system of equations are found in the table below:
We would like to give credit to the Bologna '08 team and UNIPV-Pavia '08 team, who's project was useful in determining our own equations.
Conjugation
A model for bacterial conjugal gene transfer on solid surfaces and Rule-based modelling of conjugative plasmid transfer and incompatibility