Template:Stanford Parts Table 0809

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Revision as of 00:27, 22 October 2009

Part #NamePart DescriptionType
BBa_K223040 SoxR GeneThis part produces the SoxR protein, which in the presence of oxidative stresses, such as paraquat and nitric oxide, binds with high affinity to the SoxS promoter. The SoxR generator, when coupled with the SoxS promoter, can be utilized as an inducible sensor for oxidative stress.Basic
Bba_K223041SoxS promoterThe SoxS promoter is activated by the SoxR protein in the presence of oxidative stress, such as Paraquat or Nitric Oxide. It has a high affinity binding with the SoxR protein. It can be used in conjunction with the SoxR gene as an inducible sensor for oxidative stress. Basic
Bba_K223042Blh GeneThe Blh gene cleaves beta-carotene into retinal. It can be used in the pathway for the production of retinoic acid from beta-carotene in conjunction with the RALDH II genes. Basic
Bba_K223043RALDH II GeneThe Raldh II gene converts retinal into retinoic acid. It is helpful if used in conjunction with the Blh gene for the entire process of converting beta-carotene into retinoic acid.Basic
Bba_K223044SoxR-SoxS SystemThis entire system works as a superoxide sensor. Superoxides activate the SoxR protein to bind with the SoxS Promoter and begin transcription of downstream genes. It is an inducible sensor.Composite
Bba_K223045 RALDH II IntermediateWorking composite part with a ribosome binding site and terminator.Intermediate
Bba_K223046SoxR/SoxS- GFPSoxR - SoxS Promoter System with downstream GFP production. This was used to characterize the inducible oxidative stress signal when activating the SoxR-SoxS promoter system.Composite
Bba_K223047Lacl Promoter-SoxR/SoxS-GFPThis is the SoxR-SoxS inducible promoter system with downstream production of GFP in order to characterize the device. We used the lacl regulated promoter.Composite
Bba_K223048Blh and RALDH IIThis is the RBS- Blh- RBS- RALDH II- TT generator. Both of these parts are important in the cleaving of beta carotene into retinoic acid.Intermediate
Bba_K223049SoxR - SoxS- Blh and RALDH IIThis is the superoxide inducible SoxR-SoxS promoter system coupled with the production of Blh and RALDH II genes for the cleaving of beta carotene into retinoic acid.Composite
Bba_K223050Lacl Promoter-SoxR - SoxS -Blh and RALDH II Same as BBa_K223049 with the addition of an inducible lacl promoter.Composite
Bba_K223051Fill in
Bba_K223052Fill in
Bba_K223053Fill in
Bba_K223054Fill in
Bba_K223055Fill in
Bba_K223056Fill in
Bba_K223057Fill in
Bba_K223058Fill in
Bba_K223059Fill in
Bba_K223060Fill in
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