IGEM:IMPERIAL/2009/M3/Modelling/Analysis/1/Legend

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=Legend=

<table border=1>
<tr>
<td><b>Term</b></td>
<td><b>Variable/Parameter</b></td>
<td><b>Meaning/description</b></td>
</tr>
<tr>
<td>E</td>
<td>Variable</td>
<td>Restriction enzymes DpnII or TaqI</td>
</tr>
<tr>
<td>k<sub>E</sub></td>
<td>Parameter</td>
<td>Rate of translation of restriction enzymes DpnII or TaqI</td>
</tr>

<tr>
<td>mE</td>
<td>Variable</td>
<td>mRNA of restriction enzymes</td>
</tr>

<tr>
<td>d<sub>E</sub></td>
<td>Parameter</td>
<td>Rate of degradation of restriction enzymes</td>
</tr>

<tr>
<td>d<sub>mE</sub></td>
<td>Parameter</td>
<td>Rate of degradation of mRNA of restriction enzyme</td>
</tr>

<tr>
<td>mcI</td>
<td>Variable</td>
<td>mRNA of cI protein</td>
</tr>

<tr>
<td>k<sub>mcI</sub></td>
<td>Parameter</td>
<td>rate of transcription of mRNA of cI protein</td>
</tr>

<tr>
<td>d<sub>mcI</sub></td>
<td>Parameter</td>
<td>Rate of degradation of mRNA of cI protein</td>
</tr>

<tr>
<td>cI</td>
<td>Variable</td>
<td>Protein cI</td>
</tr>

<tr>
<td>k<sub>cI</sub></td>
<td>Parameter</td>
<td>Rate of translation of cI protein</td>
</tr>


<tr>
<td>T</td>
<td>Variable</td>
<td>Temperature</td>
</tr>

<tr>
<td>D</td>
<td>Variable</td>
<td>Amount of dead E. coli</td>
</tr>

<tr>
<td>N</td>
<td>Variable</td>
<td>Amount of live E. coli</td>
</tr>

<tr>
<td>g</td>
<td>Parameter</td>
<td>Growth constant for E. coli/td>
</tr>

<tr>
<td>d</td>
<td>Parameter</td>
<td>Death constant for E. coli</td>
</tr>

<tr>
<td>nt</td>
<td>Parameter</td>
<td>Hill coefficient for thermal induction</td>
</tr>

<tr>
<td>K<sub>nt</sub></td>
<td>Parameter</td>
<td>Threshold for the hill function of thermal induction</td>
</tr>

<tr>
<td>nm</td>
<td>Parameter</td>
<td>Hill coefficient for rate of production of mRNA of restriction enzymes</td>
</tr>

<tr>
<td>ncI</td>
<td>Parameter</td>
<td>Hill coefficient for concentration of cI protein</td>
</tr>


<tr>
<td>K<sub>nm</sub></td>
<td>Parameter</td>
<td>Threshold for the hill function of the production of mRNA of restriction enzymes</td>
</tr>

<tr>
<td>K<sub>me</sub></td>
<td>Parameter</td>
<td>Threshold of hill function for cell death</td>
</tr>

<tr>
<td>ne</td>
<td>Parameter</td>
<td>Hill coefficient for rate of cell killing</td>
</tr>


<tr>
<td>k<sub>1</sub></td>
<td>Parameter</td>
<td>Rate of translation of restriction enzymes</td>
</tr>

<tr>
<td>k<sub>2</sub></td>
<td>Parameter</td>
<td>Constant in hill function of restriction enzymes, for cell death</td>
</tr>

</table>
<br>

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