Team:TUDelft/Modeling Conjugation Plots

From 2009.igem.org

(Difference between revisions)
(New page: {{Template:TUDelftiGEM2009_menu_Model}} =Conjugation Modeling Plots= ==SIM1== Parameters used: g<sub>r</sub> = 20 μm/hr λ = 5.76 CFU/mm<sup>2</sup> (N<sub>d</sub> = 10000...)
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Ratio of Donors to Recipients = 1
Ratio of Donors to Recipients = 1
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{|border = "0"
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|-
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|rowspan="4"|
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<gallery widths="240px" perrow="2" heights="188px" >
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Image:Gr30ng099_1hrb1R.png | Recipients at T = 0 hr.
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Image:Gr30ng099_1hrb1D.png | Donors at T = 0 hr.
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Image:Gr30ng099_1hrb1T.png | Transconjugants at T = 0.1 hr.
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Image:Gr30ng099_1hrb2T.png | Transconjugants at T = 0.2 hr.
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Image:Gr30ng099_1hrb3T.png | Transconjugants at T = 0.3 hr.
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Image:Gr30ng099_1hrb4T.png | Transconjugants at T = 0.4 hr.
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Image:Gr30ng099_1hrb5T.png | Transconjugants at T = 0.5 hr.
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Image:Gr30ng099_1hrb6T.png | Transconjugants at T = 0.6 hr.
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Image:Gr30ng099_1hrb7T.png | Transconjugants at T = 0.7 hr.
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Image:Gr30ng099_1hrb8T.png | Transconjugants at T = 0.8 hr.
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Image:Gr30ng099_1hrb9T.png | Transconjugants at T = 0.9 hr.
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Image:Gr30ng099_1hrb10T.png | Transconjugants at T = 1.0 hr.
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</gallery>
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|}
==SIM3==
==SIM3==
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Ratio of Donors to Recipients = 1
Ratio of Donors to Recipients = 1
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{|border = "0"
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|-
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|rowspan="4"|
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<gallery widths="240px" perrow="2" heights="188px" >
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Image:Gr40ng099_1hrb1R.png | Recipients at T = 0 hr.
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Image:Gr40ng099_1hrb1D.png | Donors at T = 0 hr.
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Image:Gr40ng099_1hrb1T.png | Transconjugants at T = 0.1 hr.
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Image:Gr40ng099_1hrb2T.png | Transconjugants at T = 0.2 hr.
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Image:Gr40ng099_1hrb3T.png | Transconjugants at T = 0.3 hr.
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Image:Gr40ng099_1hrb4T.png | Transconjugants at T = 0.4 hr.
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Image:Gr40ng099_1hrb5T.png | Transconjugants at T = 0.5 hr.
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Image:Gr40ng099_1hrb6T.png | Transconjugants at T = 0.6 hr.
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Image:Gr40ng099_1hrb7T.png | Transconjugants at T = 0.7 hr.
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Image:Gr40ng099_1hrb8T.png | Transconjugants at T = 0.8 hr.
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Image:Gr40ng099_1hrb9T.png | Transconjugants at T = 0.9 hr.
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Image:Gr40ng099_1hrb10T.png | Transconjugants at T = 1.0 hr.
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</gallery>
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|}
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Ratio of Donors to Recipients = 1
Ratio of Donors to Recipients = 1
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 +
{|border = "0"
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|-
 +
|rowspan="4"|
 +
<gallery widths="240px" perrow="2" heights="188px" >
 +
Image:Gr50ng099_1hrb1R.png | Recipients at T = 0 hr.
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Image:Gr50ng099_1hrb1D.png | Donors at T = 0 hr.
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Image:Gr50ng099_1hrb1T.png | Transconjugants at T = 0.1 hr.
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Image:Gr50ng099_1hrb2T.png | Transconjugants at T = 0.2 hr.
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Image:Gr50ng099_1hrb3T.png | Transconjugants at T = 0.3 hr.
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Image:Gr50ng099_1hrb4T.png | Transconjugants at T = 0.4 hr.
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Image:Gr50ng099_1hrb5T.png | Transconjugants at T = 0.5 hr.
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Image:Gr50ng099_1hrb6T.png | Transconjugants at T = 0.6 hr.
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Image:Gr50ng099_1hrb7T.png | Transconjugants at T = 0.7 hr.
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Image:Gr50ng099_1hrb8T.png | Transconjugants at T = 0.8 hr.
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Image:Gr50ng099_1hrb9T.png | Transconjugants at T = 0.9 hr.
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Image:Gr50ng099_1hrb10T.png | Transconjugants at T = 1.0 hr.
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</gallery>
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|}
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Ratio of Donors to Recipients = 1
Ratio of Donors to Recipients = 1
 +
 +
{|border = "0"
 +
|-
 +
|rowspan="4"|
 +
<gallery widths="240px" perrow="2" heights="188px" >
 +
Image:Gr60ng099_1hrb1R.png | Recipients at T = 0 hr.
 +
 +
Image:Gr60ng099_1hrb1D.png | Donors at T = 0 hr.
 +
 +
Image:Gr60ng099_1hrb1T.png | Transconjugants at T = 0.1 hr.
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Image:Gr60ng099_1hrb2T.png | Transconjugants at T = 0.2 hr.
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Image:Gr60ng099_1hrb3T.png | Transconjugants at T = 0.3 hr.
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Image:Gr60ng099_1hrb4T.png | Transconjugants at T = 0.4 hr.
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Image:Gr60ng099_1hrb5T.png | Transconjugants at T = 0.5 hr.
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Image:Gr60ng099_1hrb6T.png | Transconjugants at T = 0.6 hr.
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Image:Gr60ng099_1hrb7T.png | Transconjugants at T = 0.7 hr.
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Image:Gr60ng099_1hrb8T.png | Transconjugants at T = 0.8 hr.
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Image:Gr60ng099_1hrb9T.png | Transconjugants at T = 0.9 hr.
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Image:Gr60ng099_1hrb10T.png | Transconjugants at T = 1.0 hr.
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</gallery>
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|}
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Ratio of Donors to Recipients = 1
Ratio of Donors to Recipients = 1
 +
 +
{|border = "0"
 +
|-
 +
|rowspan="4"|
 +
<gallery widths="240px" perrow="2" heights="188px" >
 +
Image:Gr20ng099_1hrb1R.png | Recipients at T = 0 hr.
 +
 +
Image:Gr20ng099_1hrb1D.png | Donors at T = 0 hr.
 +
 +
Image:Gr20ng099_1hrb1T.png | Transconjugants at T = 0.1 hr.
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Image:Gr20ng099_1hrb2T.png | Transconjugants at T = 0.2 hr.
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Image:Gr20ng099_1hrb3T.png | Transconjugants at T = 0.3 hr.
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Image:Gr20ng099_1hrb4T.png | Transconjugants at T = 0.4 hr.
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Image:Gr20ng099_1hrb5T.png | Transconjugants at T = 0.5 hr.
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Image:Gr20ng099_1hrb6T.png | Transconjugants at T = 0.6 hr.
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Image:Gr20ng099_1hrb7T.png | Transconjugants at T = 0.7 hr.
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Image:Gr20ng099_1hrb8T.png | Transconjugants at T = 0.8 hr.
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Image:Gr20ng099_1hrb9T.png | Transconjugants at T = 0.9 hr.
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Image:Gr20ng099_1hrb10T.png | Transconjugants at T = 1.0 hr.
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</gallery>
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|}
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Ratio of Donors to Recipients = 1
Ratio of Donors to Recipients = 1
 +
 +
{|border = "0"
 +
|-
 +
|rowspan="4"|
 +
<gallery widths="240px" perrow="2" heights="188px" >
 +
Image:Gr20ng099_1hrb1R.png | Recipients at T = 0 hr.
 +
 +
Image:Gr20ng099_1hrb1D.png | Donors at T = 0 hr.
 +
 +
Image:Gr20ng099_1hrb1T.png | Transconjugants at T = 0.1 hr.
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Image:Gr20ng099_1hrb2T.png | Transconjugants at T = 0.2 hr.
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Image:Gr20ng099_1hrb3T.png | Transconjugants at T = 0.3 hr.
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Image:Gr20ng099_1hrb4T.png | Transconjugants at T = 0.4 hr.
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Image:Gr20ng099_1hrb5T.png | Transconjugants at T = 0.5 hr.
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Image:Gr20ng099_1hrb6T.png | Transconjugants at T = 0.6 hr.
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Image:Gr20ng099_1hrb7T.png | Transconjugants at T = 0.7 hr.
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Image:Gr20ng099_1hrb8T.png | Transconjugants at T = 0.8 hr.
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Image:Gr20ng099_1hrb9T.png | Transconjugants at T = 0.9 hr.
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Image:Gr20ng099_1hrb10T.png | Transconjugants at T = 1.0 hr.
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</gallery>
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|}
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Ratio of Donors to Recipients = 1
Ratio of Donors to Recipients = 1
 +
 +
{|border = "0"
 +
|-
 +
|rowspan="4"|
 +
<gallery widths="240px" perrow="2" heights="188px" >
 +
Image:Gr20ng099_1hrb1R.png | Recipients at T = 0 hr.
 +
 +
Image:Gr20ng099_1hrb1D.png | Donors at T = 0 hr.
 +
 +
Image:Gr20ng099_1hrb1T.png | Transconjugants at T = 0.1 hr.
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Image:Gr20ng099_1hrb2T.png | Transconjugants at T = 0.2 hr.
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Image:Gr20ng099_1hrb3T.png | Transconjugants at T = 0.3 hr.
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Image:Gr20ng099_1hrb4T.png | Transconjugants at T = 0.4 hr.
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Image:Gr20ng099_1hrb5T.png | Transconjugants at T = 0.5 hr.
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Image:Gr20ng099_1hrb6T.png | Transconjugants at T = 0.6 hr.
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Image:Gr20ng099_1hrb7T.png | Transconjugants at T = 0.7 hr.
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Image:Gr20ng099_1hrb8T.png | Transconjugants at T = 0.8 hr.
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Image:Gr20ng099_1hrb9T.png | Transconjugants at T = 0.9 hr.
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Image:Gr20ng099_1hrb10T.png | Transconjugants at T = 1.0 hr.
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</gallery>
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|}
==SIM9==
==SIM9==
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Ratio of Donors to Recipients = 1
Ratio of Donors to Recipients = 1
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{|border = "0"
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|-
 +
|rowspan="4"|
 +
<gallery widths="240px" perrow="2" heights="188px" >
 +
Image:Gr20ng099_1hrb1R.png | Recipients at T = 0 hr.
 +
 +
Image:Gr20ng099_1hrb1D.png | Donors at T = 0 hr.
 +
 +
Image:Gr20ng099_1hrb1T.png | Transconjugants at T = 0.1 hr.
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Image:Gr20ng099_1hrb2T.png | Transconjugants at T = 0.2 hr.
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Image:Gr20ng099_1hrb3T.png | Transconjugants at T = 0.3 hr.
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Image:Gr20ng099_1hrb4T.png | Transconjugants at T = 0.4 hr.
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Image:Gr20ng099_1hrb5T.png | Transconjugants at T = 0.5 hr.
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Image:Gr20ng099_1hrb6T.png | Transconjugants at T = 0.6 hr.
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Image:Gr20ng099_1hrb7T.png | Transconjugants at T = 0.7 hr.
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Image:Gr20ng099_1hrb8T.png | Transconjugants at T = 0.8 hr.
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Image:Gr20ng099_1hrb9T.png | Transconjugants at T = 0.9 hr.
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Image:Gr20ng099_1hrb10T.png | Transconjugants at T = 1.0 hr.
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</gallery>
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|}
[[Team:TUDelft/Modeling_Conjugation|<< Back to Modeling Conjugation]]
[[Team:TUDelft/Modeling_Conjugation|<< Back to Modeling Conjugation]]
{{Template:TUDelftiGEM2009_end}}
{{Template:TUDelftiGEM2009_end}}

Revision as of 18:26, 17 October 2009

Conjugation Modeling Plots

SIM1

Parameters used:

gr = 20 μm/hr

λ = 5.76 CFU/mm2 (Nd = 10000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.

SIM2

Parameters used:

gr = 30 μm/hr

λ = 5.76 CFU/mm2 (Nd = 10000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.

SIM3

Parameters used:

gr = 40 μm/hr

λ = 5.76 CFU/mm2 (Nd = 10000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.


SIM4

Parameters used:

gr = 50 μm/hr

λ = 5.76 CFU/mm2 (Nd = 10000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.


SIM5

Parameters used:

gr = 60 μm/hr

λ = 5.76 CFU/mm2 (Nd = 10000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.


SIM6

Parameters used:

gr = 30 μm/hr

λ = 1.44 CFU/mm2 (Nd = 1000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.


SIM7

Parameters used:

gr = 30 μm/hr

λ = 2.88 CFU/mm2 (Nd = 5000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.


SIM8

Parameters used:

gr = 20 μm/hr

λ = 11.53 CFU/mm2 (Nd = 20000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.

SIM9

Parameters used: gr = 20 μm/hr

λ = 23.06 CFU/mm2 (Nd = 40000)

Ratio of Donors to Recipients = 1

Recipients at T = 0 hr.

Donors at T = 0 hr.

Transconjugants at T = 0.1 hr.

Transconjugants at T = 0.2 hr.

Transconjugants at T = 0.3 hr.

Transconjugants at T = 0.4 hr.

Transconjugants at T = 0.5 hr.

Transconjugants at T = 0.6 hr.

Transconjugants at T = 0.7 hr.

Transconjugants at T = 0.8 hr.

Transconjugants at T = 0.9 hr.

Transconjugants at T = 1.0 hr.

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