August/10 August 2009

From 2009.igem.org

(Difference between revisions)
Line 16: Line 16:
digestion with restriction enzyme
digestion with restriction enzyme
-
<table width="150" border="2" cellpadding="0" cellspacing="0" bordercolor="#000000">
+
<table border="1" Frame="box">
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<tr>
+
<tr><th colspan="2">Vector1</th><th colspan="2">Insert1</th></tr>
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<td width="257">'''Insert 1'''</td>
+
<tr><td>1-23L</td><td>12</td><td>2-16H</td><td>6</td></tr>
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<td>uL</td>
+
<tr><td>EcoRI</td><td>1</td><td>EcoRI</td><td>1</td><tr>
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</tr>
+
<tr><td>SpeI</td><td>1</td><td>XbaI</td><td>1</td><tr>
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<tr>
+
<tr><td> No.2 Buffer</td><td>2</td><td>No.2</td><td>2</td></tr>
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<td>2-16H</td>
+
<tr><td>dH2O</td><td>4</td><td>dH2O</td><td>10</td></tr>
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<td>6</td>
+
<tr><td>total</td><td>20uL</td><td>total</td><td>20uL</td></tr>
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</tr>
+
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<tr>
+
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<td>EcoRⅠ</td>
+
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<td>1</td>
+
-
</tr><tr>
+
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<td>XbaⅠ</td>
+
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<td>1</td>
+
-
</tr><tr>
+
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<td>10*Buffer No.2</td>
+
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<td>2</td>
+
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</tr><tr>
+
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<td>dH2O</td>
+
-
<td>10</td>
+
-
</tr>
+
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<tr>
+
-
<td>TOTAL</td>
+
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<td>20</td></tr>
+
</table>
</table>
-
 
+
<table border="1" Frame="box">
-
<table width="150" border="2" cellpadding="0" cellspacing="0" bordercolor="#000000">
+
<tr><th colspan="2">Vector2</th><th colspan="2">Insert2</th></tr>
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<tr>
+
<tr><td>1-23L</td><td>12</td><td>3-18O</td><td>5</td></tr>
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<td width="257">'''Vector 1'''</td>
+
<tr><td>EcoRI</td><td>1</td><td>EcoRI</td><td>1</td><tr>
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<td>uL</td>
+
<tr><td>SpeI</td><td>1</td><td>XbaI</td><td>1</td><tr>
-
</tr>
+
<tr><td> No.2 Buffer</td><td>2</td><td>No.2</td><td>2</td></tr>
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<tr>
+
<tr><td>dH2O</td><td>4</td><td>dH2O</td><td>11</td></tr>
-
<td>1-23L</td>
+
<tr><td>total</td><td>20uL</td><td>total</td><td>20uL</td></tr>
-
<td>12</td>
+
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</tr>
+
-
<tr>
+
-
<td>EcoRⅠ</td>
+
-
<td>1</td>
+
-
</tr><tr>
+
-
<td>SpeⅠ</td>
+
-
<td>1</td>
+
-
</tr><tr>
+
-
<td>10*Buffer No.2</td>
+
-
<td>2</td>
+
-
</tr><tr>
+
-
<td>dH2O</td>
+
-
<td>4</td>
+
-
</tr>
+
-
<tr>
+
-
<td>TOTAL</td>
+
-
<td>20</td></tr>
+
</table>
</table>
-
 
-
<table width="150" border="2" cellpadding="0" cellspacing="0" bordercolor="#000000">
 
-
<tr>
 
-
<td width="257">'''Insert 2'''</td>
 
-
<td>uL</td>
 
-
</tr>
 
-
<tr>
 
-
<td>3-18O</td>
 
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<td>5</td>
 
-
</tr>
 
-
<tr>
 
-
<td>EcoRⅠ</td>
 
-
<td>1</td>
 
-
</tr><tr>
 
-
<td>XbaⅠ</td>
 
-
<td>1</td>
 
-
</tr><tr>
 
-
<td>10*Buffer No.2</td>
 
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<td>2</td>
 
-
</tr><tr>
 
-
<td>dH2O</td>
 
-
<td>11</td>
 
-
</tr>
 
-
<tr>
 
-
<td>TOTAL</td>
 
-
<td>20</td></tr>
 
-
</table>
 
-
 
-
 
-
 
-
<table width="150" border="2" cellpadding="0" cellspacing="0" bordercolor="#000000">
 
-
<tr>
 
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<td width="257">'''Vector 2'''</td>
 
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<td>uL</td>
 
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</tr>
 
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<tr>
 
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<td>1-23L</td>
 
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<td>12</td>
 
-
</tr>
 
-
<tr>
 
-
<td>EcoRⅠ</td>
 
-
<td>1</td>
 
-
</tr><tr>
 
-
<td>SpeⅠ</td>
 
-
<td>1</td>
 
-
</tr><tr>
 
-
<td>10*Buffer No.2</td>
 
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<td>2</td>
 
-
</tr><tr>
 
-
<td>dH2O</td>
 
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<td>4</td>
 
-
</tr>
 
-
<tr>
 
-
<td>TOTAL</td>
 
-
<td>20</td></tr>
 
-
</table>
 
↓<br>
↓<br>
-
failured
+
failure<br>

Revision as of 08:03, 21 August 2009

1.Min prep
Result of Nanodrop concentration check

(sample No.) (concentration)
1-6O            35.2 ng/uL 
1-18L           41.8 ng/uL 
1-10K           39.1 ng/uL 


2.make competent cells(with CaCl2)


3.digestion and ligation
digestion with restriction enzyme

Vector1Insert1
1-23L122-16H6
EcoRI1EcoRI1
SpeI1XbaI1
No.2 Buffer2No.22
dH2O4dH2O10
total20uLtotal20uL


Vector2Insert2
1-23L123-18O5
EcoRI1EcoRI1
SpeI1XbaI1
No.2 Buffer2No.22
dH2O4dH2O11
total20uLtotal20uL




failure


digestion with restriction enzyme
insert : E+S 
vector : E+x 



4.Transformation
to get new plasmid

1-23L A 
1-18C A 
1-20F K 
1-12H K 
1-6I  A 
2-6P  A 
1-15N A
used '8/10 competent cell