Team:Chiba/Team

From 2009.igem.org

(Difference between revisions)
(Collaborations)
(Safety)
 
(12 intermediate revisions not shown)
Line 1: Line 1:
-
<html><link rel="stylesheet" href="https://2008.igem.org/wiki/index.php?title=User:Maiko/chiba.css&action=raw&ctype=text/css" type="text/css" /></html>
+
<html><link rel="stylesheet" href="https://2009.igem.org/wiki/index.php?title=User:Yoshimi/chiba1.css&action=raw&ctype=text/css" type="text/css" /></html>
-
{| width="100%" cellpadding="0px" cellspacing="5px" style="font-family:'Century Gothic', sans-serif;"
+
:::::<Font Size="7">'''''E''.coli Time Manager '''</Font>  <html><a href="http://www.chiba-u.ac.jp/e/" target="_blank"><img src="https://static.igem.org/mediawiki/2009/5/5f/Logo_chiba-u.gif" align="right" width="250"></a></html>
 +
 
 +
 
 +
{| style="color:white;" cellpadding="2" cellspacing="0" border="0" width="100%" align="center" class="menu" |align="center"
 +
!align="center"|[[Team:Chiba|Home]]
 +
!align="center"|[[Team:Chiba/Team|The Team]]
 +
!align="center"|[[Team:Chiba/Parts|Parts]]
 +
!align="center"|[[Team:Chiba/Reference|Reference]]
 +
!align="center"|[[Team:Chiba/Notebook|Notebook]]
 +
!align="center"|[[Team:Chiba/Notebook/protocol|Protocols]]
 +
!align="center"|[[Team:Chiba/Links|Links]]
 +
!align="center"|[[Team:Chiba/Acknowledgements|Acknowledgements]]
 +
!align="center"|[[Team:Chiba/Contact|Contact]]
 +
|}
 +
{| width="100%" cellpadding="0px" cellspacing="5px" style="font-family:'Arial', sans-serif;"
|- style="background:#BC8F8FF; height:100px;" valign="top"
|- style="background:#BC8F8FF; height:100px;" valign="top"
|style="width:15%;"|
|style="width:15%;"|
-
<html><a href="https://2009.igem.org/Team:Chiba" target="_blank"><img src="
+
 
-
https://static.igem.org/mediawiki/2008/8/8c/Chiba-logo.gif" width="110" height="110" |right></a>
+
<table class="calendar" width="100%" border="1" cellpadding="1" cellspacing="0" align="center" bordercolor="#800000" align="center">
-
</html>
+
-
<br>
+
-
<table width="100%" border="1" cellpadding="1" cellspacing="0" align="center" bordercolor="#800000" align="center">
+
<tr><td>
<tr><td>
'''[[Team:Chiba/Project|The Project]]'''
'''[[Team:Chiba/Project|The Project]]'''
</td></tr><tr><td>
</td></tr><tr><td>
-
*[[Team:Chiba/Project#Introduction|Introduction]]
+
'''1,''' [[Team:Chiba/Project#Introduction|Introduction]]
</td></tr><tr><td>
</td></tr><tr><td>
-
*[[Team:Chiba/Project#Project_Design|Project Design]]
+
'''2,''' [[Team:Chiba/Project#Project_Design|Project Design]]
</td></tr><tr><td>
</td></tr><tr><td>
-
*[[Team:Chiba/Project#Conclusions|Conclusions]]
+
'''3,''' [[Team:Chiba/Project#Experiments,_Results_&_Discussion|Experiments, Results & Discussion]]
-
</td></tr></table>
+
-
 
+
-
 
+
-
<table width="100%" border="1" cellpadding="1" cellspacing="0" align="center" bordercolor="#800000" align="center">
+
-
<tr><td>
+
-
'''[[Team:Chiba/Project/Delay_Switch|Delay Switch]]'''
+
</td></tr><tr><td>
</td></tr><tr><td>
-
*[[Team:Chiba/Project/Delay_Switch#Experiments_(2008)|Experiments 2008]]
+
3-1, [[Team:Chiba/Project#Making_LuxR_Mutants|Making LuxR Mutants]]
</td></tr><tr><td>
</td></tr><tr><td>
-
*[[Team:Chiba/Project/Delay_Switch#Results_(2008)|Results 2008]]
+
3-2, [[Team:Chiba/Project#Characterization_of_LuxR_Mutants|Characterization of LuxR Mutants]]
</td></tr><tr><td>
</td></tr><tr><td>
-
*[[Team:Chiba/Project/Delay_Switch#Experiments_(2009)|Experiments 2009]]
+
3-3, [[Team:Chiba/Project#Demonstration|Demonstration]]
</td></tr><tr><td>
</td></tr><tr><td>
-
*[[Team:Chiba/Project/Delay_Switch#Results_(2009)|Results 2009]]
+
'''5,''' [[Team:Chiba/Project#Conclusions|Conclusions]]
-
</td></tr></table>
+
-
 
+
-
 
+
-
<table width="100%" border="1" cellpadding="1" cellspacing="0" align="center" bordercolor="#800000" align="center">
+
-
<tr><td>
+
-
'''[[Team:Chiba/Project/Parallel|Parallel Activation]]'''
+
-
</td></tr><tr><td>
+
-
*[[Team:Chiba/Modeling|Modeling]]
+
-
</td></tr><tr><td>
+
-
*[[Team:Chiba/Project/Parallel#Experiments|Experiments]]
+
-
</td></tr><tr><td>
+
-
*[[Team:Chiba/Project/Parallel#Results|Results]]
+
-
</td></tr></table>
+
-
 
+
-
 
+
-
<table width="100%" border="1" cellpadding="1" cellspacing="0" align="center" bordercolor="#800000" align="center">
+
-
<tr><td>
+
-
'''[[Team:Chiba/Project/Series|Series Activation]]'''
+
-
</td></tr><tr><td>
+
-
*[[Team:Chiba/Modeling|Modeling]]
+
-
</td></tr><tr><td>
+
-
*[[Team:Chiba/Project/Series#Experiments|Experiments]]
+
-
</td></tr><tr><td>
+
-
*[[Team:Chiba/Project/Series#Results|Results]]
+
</td></tr></table>
</td></tr></table>
|style="width:85%;" bgcolor="#FFFFFF"|
|style="width:85%;" bgcolor="#FFFFFF"|
-
<Font Size="6">''E''.coli Time Manager Since 2008</Font>  <html><a href="http://www.chiba-u.ac.jp/e/" target="_blank"><img src="https://static.igem.org/mediawiki/2009/5/5f/Logo_chiba-u.gif" align="right" width="250"></a></html>
 
-
 
-
 
-
{| style="color:white;" cellpadding="2" cellspacing="0" border="0" width="100%" align="center" class="menu" |align="center"
 
-
!align="center"|[[Team:Chiba|Home]]
 
-
!align="center"|[[Team:Chiba/Team|The Team]]
 
-
!align="center"|[[Team:Chiba/Parts|Parts]]
 
-
!align="center"|[[Team:Chiba/Reference|Reference]]
 
-
!align="center"|[[Team:Chiba/Notebook|Notebook]]
 
-
!align="center"|[[Team:Chiba/Notebook/protocol|Protocols]]
 
-
!align="center"|[[Team:Chiba/Links|Links]]
 
-
!align="center"|[[Team:Chiba/Acknowledgements|Acknowledgements]]
 
-
!align="center"|[[Team:Chiba/Contact|Contact]]
 
-
|}
 
__NOTOC__
__NOTOC__
== '''Who we are''' ==
== '''Who we are''' ==
Line 108: Line 75:
== '''What we did''' ==
== '''What we did''' ==
-
 
+
#Register the team, have a great summer, and plan to have fun at the Jamboree.
-
(Provide proper attribution for all work)
+
#Successfully complete and submit this iGEM 2009 Judging form.
-
 
+
#Create and share a Description of the team's project using the iGEM wiki and the team's parts using the Registry of Standard Biological Parts.
 +
#Plan to present a Poster and Talk at the iGEM Jamboree.
 +
#Enter information detailing, description of function, standard BioBrick Part or Device in the Registry of Standard Biological Parts.
 +
#Submit DNA for at least one new BioBrick Part or Device to the Registry.
 +
#Demonstrate that at least one new BioBrick Part or Device of your own design and construction works as expected; characterize the operation of your new part/device.
 +
#Enter this information and other documentation on both the iGEM 2009 wiki and the Registry.
 +
##*Part Number(s): BBa_K247003, BBa_K247004
 +
#Characterize or improve an existing BioBrick Part or Device and enter this information back on the Registry.
 +
#Part Number(s): BBa_I731012, BBa_K084012
 +
#We helped [[Team:Osaka|OSAKA iGEM team]] by sending following parts.(6 Oct)
 +
##K084007, K084004, K084008, K084005, K084010, K084006, K084012, K084003, T9002
 +
#Characterize or improve an existing BioBrick Part or Device and enter this information back on the Registry.
 +
##Part Number(s): BBa_I731012, BBa_K084012
== '''Where we're from''' ==
== '''Where we're from''' ==
Line 144: Line 123:
|style="width:50%;"|
|style="width:50%;"|
'''Ethics'''
'''Ethics'''
 +
 +
::*[[Team:TUDelft]]
 +
 +
::*[[Team:Valencia]]
 +
 +
<html><a href="https://2009.igem.org/Team:Valencia/Human" target="_blank"> <img src="https://static.igem.org/mediawiki/igem.org/4/49/V_Chiba.JPG" width="110" height="110"></a></html>
 +
Thank you [[Team:Valencia|Valencia]]!
 +
 +
|}
== Safety ==
== Safety ==
Line 151: Line 139:
Specifically, teams should consider the following four questions:
Specifically, teams should consider the following four questions:
-
#Would any of your project ideas raise safety issues in terms of:
+
1, Would any of your project ideas raise safety issues in terms of:
-
#*researcher safety,  
+
:*researcher safety,  
-
#*public safety, or  
+
:*public safety, or  
-
#*environmental safety?
+
:*environmental safety?
-
#Is there a local biosafety group, committee, or review board at your institution?
+
 
-
#What does your local biosafety group think about your project?
+
No, our project ideas would not raise any safety issues. I think...
-
#Do any of the new BioBrick parts that you made this year raise any safety issues?   
+
 
-
#*If yes, did you document these issues in the Registry?
+
 
 +
2, Is there a local biosafety group, committee, or review board at your institution?
 +
 
 +
Yes
 +
 
 +
 
 +
3, What does your local biosafety group think about your project?
 +
 
 +
I don't know.
 +
 
 +
 
 +
4, Do any of the new BioBrick parts that you made this year raise any safety issues?   
 +
 
 +
No
 +
 
 +
 
 +
5, *If yes, did you document these issues in the Registry?
Teams, please document any answers to these (or other) safety questions in your presentation, wiki presentation, or poster.
Teams, please document any answers to these (or other) safety questions in your presentation, wiki presentation, or poster.
Line 167: Line 171:
We participated in these team's survey.
We participated in these team's survey.
-
::*[[Team:TUDelft]]
 
-
 
-
::*[[Team:Valencia]]
 
-
 
-
<html><a href="https://2009.igem.org/Team:Valencia/Human" target="_blank"> <img src="https://static.igem.org/mediawiki/igem.org/4/49/V_Chiba.JPG" width="110" height="110"></a></html>
 
-
Thank you [[Team:Valencia|Valencia]]!
 
-
 
-
|}
 
|}
|}

Latest revision as of 00:02, 22 October 2009

E.coli Time Manager


The Project

1, Introduction

2, Project Design

3, Experiments, Results & Discussion

3-1, Making LuxR Mutants

3-2, Characterization of LuxR Mutants

3-3, Demonstration

5, Conclusions

Who we are

Players:

Advisers:

  • Yohei Tashiro (D1)
  • Akinori Katabami(M2)
  • Kei Terakubo(M2)
  • Maiko Furubayashi (M1)
  • Hiroki Fukutomi (B4)
  • Masahiro Tominaga (B4)
  • [http://chem.tf.chiba-u.jp/acb03/umeno/aboutus.html The member] of [http://chem.tf.chiba-u.jp/acb03/umeno/index.html UmeG]

Faculty Advisers:

  • [http://chem.tf.chiba-u.jp/gacb02/index.html Prof. Daisuke Umeno]
  • [http://chem.tf.chiba-u.jp/~toyotaro/ Prof. Taro Toyota]
  • [http://chem.tf.chiba-u.jp/gacb02/index.html Prof. Kyouichi Saitou]

What we did

  1. Register the team, have a great summer, and plan to have fun at the Jamboree.
  2. Successfully complete and submit this iGEM 2009 Judging form.
  3. Create and share a Description of the team's project using the iGEM wiki and the team's parts using the Registry of Standard Biological Parts.
  4. Plan to present a Poster and Talk at the iGEM Jamboree.
  5. Enter information detailing, description of function, standard BioBrick Part or Device in the Registry of Standard Biological Parts.
  6. Submit DNA for at least one new BioBrick Part or Device to the Registry.
  7. Demonstrate that at least one new BioBrick Part or Device of your own design and construction works as expected; characterize the operation of your new part/device.
  8. Enter this information and other documentation on both the iGEM 2009 wiki and the Registry.
      • Part Number(s): BBa_K247003, BBa_K247004
  9. Characterize or improve an existing BioBrick Part or Device and enter this information back on the Registry.
  10. Part Number(s): BBa_I731012, BBa_K084012
  11. We helped OSAKA iGEM team by sending following parts.(6 Oct)
    1. K084007, K084004, K084008, K084005, K084010, K084006, K084012, K084003, T9002
  12. Characterize or improve an existing BioBrick Part or Device and enter this information back on the Registry.
    1. Part Number(s): BBa_I731012, BBa_K084012

Where we're from

[http://www.eng.chiba-u.ac.jp/e-index.html The Department of Applied Chemistry and Biotechnology] [http://www.chiba-u.ac.jp/e/ at Chiba University],Japan.

Collaborations

iGEM JAPAN 2009

We practiced presentation and exchanged ideas with these team.


TAIWAN TEAM

We exchanged ideas with these team. I want to express my heartfelt thanks.

Ethics

Thank you Valencia!

Safety

For iGEM 2009 teams are asked to detail how they approached any issues of biological safety associated with their projects.

Specifically, teams should consider the following four questions:

1, Would any of your project ideas raise safety issues in terms of:

  • researcher safety,
  • public safety, or
  • environmental safety?

No, our project ideas would not raise any safety issues. I think...


2, Is there a local biosafety group, committee, or review board at your institution?

Yes


3, What does your local biosafety group think about your project?

I don't know.


4, Do any of the new BioBrick parts that you made this year raise any safety issues?

No


5, *If yes, did you document these issues in the Registry?

Teams, please document any answers to these (or other) safety questions in your presentation, wiki presentation, or poster.

Judges will be asked to evaluate your project, in part, on the basis of if and how you considered and addressed issues of biological safety.

If any questions arise regarding iGEM and biological safety please send an email to safety AT igem.org.
We participated in these team's survey.