Team:Paris/Transduction overview

From 2009.igem.org

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====References====
====References====
<ol class="references">
<ol class="references">
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<li> [[Team:Paris/Transduction_overview#1 | 1]] D-ribose metabolism in Escherichia coli K-12: genetics, regulation, and transport. Lopilato JE & Beckwith JR. 1984 -  [http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=179564 179564]</li>
+
<li> [[Team:Paris/Transduction_overview#1 | 1]] D-ribose metabolism in Escherichia coli K-12: genetics, regulation, and transport. Lopilato JE & Beckwith JR. 1984 -  [http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=6327616 6327616]</li>
-
<li> [[Team:Paris/Transduction_overview#2 | 2]] Signal transfer through three compartments: transcription initiation of the Escherichia coli ferric citrate transport system from the cell surface. Härle C & Braun V. 1995 -  [http://www.ncbi.nlm.nih.gov/pubmed/11501670 11501670]</li>
+
<li> [[Team:Paris/Transduction_overview#2 | 2]] Signal transfer through three compartments: transcription initiation of the Escherichia coli ferric citrate transport system from the cell surface. Härle C & Braun V. 1995 -  [http://www.ncbi.nlm.nih.gov/pubmed/7729419 7729419]</li>
-
<li> [[Team:Paris/Transduction_overview#3 | 3]] A comparative analysis of ABC transporters in complete microbial genomes. Tomii K & Kanehisa M. 1998- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#3 | 3]] A comparative analysis of ABC transporters in complete microbial genomes. Tomii K & Kanehisa M. 1998- [http://www.ncbi.nlm.nih.gov/pubmed/9799792 9799792]</li>
-
<li> [[Team:Paris/Transduction_overview#4 | 4]] The CpxRA signal transduction system of Escherichia coli: growth-related autoactivation and control of unanticipated target operons.De Wulf P & Lin EC.  1999 - [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#4 | 4]] The CpxRA signal transduction system of Escherichia coli: growth-related autoactivation and control of unanticipated target operons.De Wulf P & Lin EC.  1999 - [http://www.ncbi.nlm.nih.gov/pubmed/10542180 10542180]</li>
-
<li> [[Team:Paris/Transduction_overview#5 | 5]] Two-component signal transduction. Stock AM & Goudreau PN. 2000- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#5 | 5]] Two-component signal transduction. Stock AM & Goudreau PN. 2000- [http://www.ncbi.nlm.nih.gov/pubmed/10966457 10966457]</li>
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<li> [[Team:Paris/Transduction_overview#6 | 6]] Vesicle-mediated transfer of virulence genes from Escherichia coli O157:H7 to other enteric bacteria. Yaron S & Matthews KR. 2000- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#6 | 6]] Vesicle-mediated transfer of virulence genes from Escherichia coli O157:H7 to other enteric bacteria. Yaron S & Matthews KR. 2000- [http://www.ncbi.nlm.nih.gov/pubmed/11010892 11010892]</li>
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<li> [[Team:Paris/Transduction_overview#7 | 7]] Periplasmic binding proteins: a versatile superfamily for protein engineering. Dwyer MA & Hellinga HW. 2004- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#7 | 7]] Periplasmic binding proteins: a versatile superfamily for protein engineering. Dwyer MA & Hellinga HW. 2004- [http://www.ncbi.nlm.nih.gov/pubmed/11010892 11010892]</li>
-
<li> [[Team:Paris/Transduction_overview#8 | 8]] Gene regulation by transmembrane signaling. Braun V & Sauter A. 2006- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
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<li> [[Team:Paris/Transduction_overview#8 | 8]] Gene regulation by transmembrane signaling. Braun V & Sauter A. 2006- [http://www.ncbi.nlm.nih.gov/pubmed/16718597 16718597]</li>
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<li> [[Team:Paris/Transduction_overview#9 | 9]] Signal transduction: networks and integrated circuits in bacterial cognition. Baker MD & Stock JB 2007- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#9 | 9]] Signal transduction: networks and integrated circuits in bacterial cognition. Baker MD & Stock JB 2007- [http://www.ncbi.nlm.nih.gov/pubmed/18054766 18054766]</li>
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<li> [[Team:Paris/Transduction_overview#10 | 10]] Systems biology of bacterial chemotaxis. Baker MD & Stock JB. 2007- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#10 | 10]] Systems biology of bacterial chemotaxis. Baker MD & Stock JB. 2007- [http://www.ncbi.nlm.nih.gov/pubmed/16529985 16529985]</li>
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<li> [[Team:Paris/Transduction_overview#11 | 11]] Control of the transcription of a short gene encoding a cyclic peptide in Streptococcus thermophilus: a new quorum-sensing system? Ibrahim M & Monnet V. 2007- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#11 | 11]] Control of the transcription of a short gene encoding a cyclic peptide in Streptococcus thermophilus: a new quorum-sensing system? Ibrahim M & Monnet V. 2007- [http://www.ncbi.nlm.nih.gov/pubmed/17921293 17921293]</li>
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<li> [[Team:Paris/Transduction_overview#12 | 12]] SRP and Sec pathway leader peptides for antibody phage display and antibody fragment production in E. coli. Thie H & Hust M. 2008- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#12 | 12]] SRP and Sec pathway leader peptides for antibody phage display and antibody fragment production in E. coli. Thie H & Hust M. 2008- [http://www.ncbi.nlm.nih.gov/pubmed/18504019 18504019]</li>
-
<li> [[Team:Paris/Transduction_overview#13 | 13]] Signal transduction and adaptive regulation through bacterial two-component systems: the Escherichia coli AtoSC paradigm. Kyriakidis DA & Tiligada E. 2009- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#13 | 13]] Signal transduction and adaptive regulation through bacterial two-component systems: the Escherichia coli AtoSC paradigm. Kyriakidis DA & Tiligada E. 2009- [http://www.ncbi.nlm.nih.gov/pubmed/19198978 19198978]</li>
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<li> [[Team:Paris/Transduction_overview#14 | 14]] comparative analysis of ABC transporter. Tomii & Kanehisa 2009- [http://www.ncbi.nlm.nih.gov/pubmed/15249060 15249060]</li>
+
<li> [[Team:Paris/Transduction_overview#14 | 14]] comparative analysis of ABC transporter. Tomii & Kanehisa 2009- [http://genome.cshlp.org/content/8/10/1048.full.html#ref-list-1 pdf-link]</li>
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[] 1984 6327616-
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[] 1995 7729419
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[] 1995 7729419-
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[] 1998 9799792
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[] 1998 9799792-
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[] 1999         10542180
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[] 1999         10542180-
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[] 2000 10966457
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[] 2000 10966457-
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[] 2000 11010892
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[] 2000 11010892-
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[] 2004 15313245
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[] 2004 11010892-
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[] 2006 16718597
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[] 2006 16718597-
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[] 2007 18054766
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[] 2007 18054766-
[] 2007 16529985
[] 2007 16529985
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[] 2007 17921293
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[] 2007 17921293-
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[] 2008 18504019
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[] 2008 18504019-
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[] 2009 19198978
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[] 2009 19198978-
#2009 -  –
#2009 -  –

Revision as of 16:08, 3 September 2009

iGEM > Paris > Reception > Overview

Introduction

- to enable gene transcription after fusionning OMVs with the outer membrane of the receiving bacterium.


We also hope that we could achieve this aim without sacrifying important proprieties of our message : specific, repeatable , multidirectional. It seems that we have two possible ways : the ABC transporters or the two component systems . ABC transporters and two component systems are natural transport system (export or import) of information, nutriments or toxines.


There is another possibility but the mecanism is mostly unknown : the DNA-containing OMVs which could be a useful mean of information transport.

References

  1. 1 D-ribose metabolism in Escherichia coli K-12: genetics, regulation, and transport. Lopilato JE & Beckwith JR. 1984 - [http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=6327616 6327616]
  2. 2 Signal transfer through three compartments: transcription initiation of the Escherichia coli ferric citrate transport system from the cell surface. Härle C & Braun V. 1995 - [http://www.ncbi.nlm.nih.gov/pubmed/7729419 7729419]
  3. 3 A comparative analysis of ABC transporters in complete microbial genomes. Tomii K & Kanehisa M. 1998- [http://www.ncbi.nlm.nih.gov/pubmed/9799792 9799792]
  4. 4 The CpxRA signal transduction system of Escherichia coli: growth-related autoactivation and control of unanticipated target operons.De Wulf P & Lin EC. 1999 - [http://www.ncbi.nlm.nih.gov/pubmed/10542180 10542180]
  5. 5 Two-component signal transduction. Stock AM & Goudreau PN. 2000- [http://www.ncbi.nlm.nih.gov/pubmed/10966457 10966457]
  6. 6 Vesicle-mediated transfer of virulence genes from Escherichia coli O157:H7 to other enteric bacteria. Yaron S & Matthews KR. 2000- [http://www.ncbi.nlm.nih.gov/pubmed/11010892 11010892]
  7. 7 Periplasmic binding proteins: a versatile superfamily for protein engineering. Dwyer MA & Hellinga HW. 2004- [http://www.ncbi.nlm.nih.gov/pubmed/11010892 11010892]
  8. 8 Gene regulation by transmembrane signaling. Braun V & Sauter A. 2006- [http://www.ncbi.nlm.nih.gov/pubmed/16718597 16718597]
  9. 9 Signal transduction: networks and integrated circuits in bacterial cognition. Baker MD & Stock JB 2007- [http://www.ncbi.nlm.nih.gov/pubmed/18054766 18054766]
  10. 10 Systems biology of bacterial chemotaxis. Baker MD & Stock JB. 2007- [http://www.ncbi.nlm.nih.gov/pubmed/16529985 16529985]
  11. 11 Control of the transcription of a short gene encoding a cyclic peptide in Streptococcus thermophilus: a new quorum-sensing system? Ibrahim M & Monnet V. 2007- [http://www.ncbi.nlm.nih.gov/pubmed/17921293 17921293]
  12. 12 SRP and Sec pathway leader peptides for antibody phage display and antibody fragment production in E. coli. Thie H & Hust M. 2008- [http://www.ncbi.nlm.nih.gov/pubmed/18504019 18504019]
  13. 13 Signal transduction and adaptive regulation through bacterial two-component systems: the Escherichia coli AtoSC paradigm. Kyriakidis DA & Tiligada E. 2009- [http://www.ncbi.nlm.nih.gov/pubmed/19198978 19198978]
  14. 14 comparative analysis of ABC transporter. Tomii & Kanehisa 2009- [http://genome.cshlp.org/content/8/10/1048.full.html#ref-list-1 pdf-link]



[] 1984 6327616- [] 1995 7729419- [] 1998 9799792- [] 1999 10542180- [] 2000 10966457- [] 2000 11010892- [] 2004 11010892- [] 2006 16718597- [] 2007 18054766- [] 2007 16529985 [] 2007 17921293- [] 2008 18504019- [] 2009 19198978-


  1. 2009 - –