Team:Wash U/Protocol

From 2009.igem.org

(Difference between revisions)
Line 32: Line 32:
*Adjust pH to 7.0-7.2
*Adjust pH to 7.0-7.2
'''Super Optimal Broth (SOB)'''
'''Super Optimal Broth (SOB)'''
-
* 2% w/v bacto-tryptone (20g)
+
*2% w/v bacto-tryptone (20g)
-
* 0.5% w/v bacto-yeast extract (5g)
+
*0.5% w/v bacto-yeast extract (5g)
-
* 8.56mM NaCl (0.5g) or 10mM NaCl (0.584g)
+
*8.56mM NaCl (0.5g) or 10mM NaCl (0.584g)
-
* 2.5mM KCl (0.186g)
+
*2.5mM KCl (0.186g)
-
* ddH2O to 1L
+
*ddH2O to 1L
'''Super Optimal Broth with Catabolite repression (SOC)'''
'''Super Optimal Broth with Catabolite repression (SOC)'''
*In addition to all of the SOB components,
*In addition to all of the SOB components,
*10mM MgCl2 (0.952g)
*10mM MgCl2 (0.952g)
*20mM glucose (3.603g)
*20mM glucose (3.603g)
-
'''Gel (for Electrophoresis)'''
 
-
*50 mL 1X TAE buffer
 
-
*0.8 g agarose
 
-
*2.5 microliters EtBr
 
'''TAE Buffer'''
'''TAE Buffer'''
-
 
+
*242 g Tris base (2-amino-2-hydroxymethyl-propane-1,3-diol) (= 2 mole)
 +
*57.1 ml glacial acetic acid (= 100% acetic acid) (57.19 ml = 1 mole)
 +
*100 ml 0.5 M Na2 EDTA (pH 8.0)
 +
*ddH2O to 1L
'''TBE Buffer'''
'''TBE Buffer'''
-
 
+
*53 g of Tris base (CAS# 37186)
 +
* 27.5 g of boric acid (CAS# 11280)
 +
*20 ml of 0.5 M EDTA (CAS# 60004) (pH 8.0)
'''Tris EDTA (TE) buffer'''
'''Tris EDTA (TE) buffer'''
*750 mL d-H20
*750 mL d-H20
Line 56: Line 57:
*fill to 1 L
*fill to 1 L
*adjust pH to 8.5
*adjust pH to 8.5
 +
'''Gel (for Electrophoresis)'''
 +
*50 mL 1X TAE buffer
 +
*0.8 g agarose
 +
*2.5 microliters EtBr
{{WashUbottom}}
{{WashUbottom}}

Revision as of 21:54, 29 June 2009

Procedures

Polymerase Chain Reaction (PCR)

text

Transformation

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Biobrick Assembly

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Gel Electrophoresis

text

Recipes

Lysogeny Broth (LB) Media

  • 10g Tryptone
  • 5g Yeast Extract
  • 10g NaCl
  • 15g Agar
  • up to 1 Liter H20

ATCC medium: Van Niel's yeast agar

  • 1.0 g K2HPO4
  • 0.5 g MgSO4
  • 10.0 g yeast extract
  • 20.0 g agar
  • 1.0 L tap water
  • Adjust pH to 7.0-7.2

Super Optimal Broth (SOB)

  • 2% w/v bacto-tryptone (20g)
  • 0.5% w/v bacto-yeast extract (5g)
  • 8.56mM NaCl (0.5g) or 10mM NaCl (0.584g)
  • 2.5mM KCl (0.186g)
  • ddH2O to 1L

Super Optimal Broth with Catabolite repression (SOC)

  • In addition to all of the SOB components,
  • 10mM MgCl2 (0.952g)
  • 20mM glucose (3.603g)

TAE Buffer

  • 242 g Tris base (2-amino-2-hydroxymethyl-propane-1,3-diol) (= 2 mole)
  • 57.1 ml glacial acetic acid (= 100% acetic acid) (57.19 ml = 1 mole)
  • 100 ml 0.5 M Na2 EDTA (pH 8.0)
  • ddH2O to 1L

TBE Buffer

  • 53 g of Tris base (CAS# 37186)
  • 27.5 g of boric acid (CAS# 11280)
  • 20 ml of 0.5 M EDTA (CAS# 60004) (pH 8.0)

Tris EDTA (TE) buffer

  • 750 mL d-H20
  • 242 g Tris base
  • 57.1 mL glacial acetic acid
  • 100 mL 0.5M EDTA (93.05 g EDTA in 500 mL d-H20, pH ~8.0)
  • fill to 1 L
  • adjust pH to 8.5

Gel (for Electrophoresis)

  • 50 mL 1X TAE buffer
  • 0.8 g agarose
  • 2.5 microliters EtBr