IllinoisTools/25 July 2009

From 2009.igem.org

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      • Note: Our notebook is organized in a weekly fashion. Click on the Saturday of every week to view the notes from the previous week.


May
MTWTFSS
        [http://2009.igem.org/IllinoisTools/1_May_2009 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_May_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_May_2009&action=edit 3]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_May_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_May_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_May_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_May_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_May_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_May_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_May_2009&action=edit 10]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_May_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_May_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_May_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_May_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_May_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_May_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_May_2009&action=edit 17]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_May_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_May_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_May_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_May_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_May_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_May_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_May_2009&action=edit 24]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_May_2009&action=edit 25] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_May_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_May_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_May_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_May_2009&action=edit 29] [http://2009.igem.org/IllinoisTools/30_May_2009 30] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/31_May_2009&action=edit 31]
June
MTWTFSS
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/1_June_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_June_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_June_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_June_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_June_2009&action=edit 5] [http://2009.igem.org/IllinoisTools/6_June_2009 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_June_2009&action=edit 7]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_June_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_June_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_June_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_June_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_June_2009&action=edit 12] [http://2009.igem.org/IllinoisTools/13_June_2009 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_June_2009&action=edit 14]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_June_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_June_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_June_2009&action=edit 17] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_June_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_June_2009&action=edit 19] [http://2009.igem.org/IllinoisTools/20_June_2009 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_June_2009&action=edit 21]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_June_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_June_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_June_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_June_2009&action=edit 25] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_June_2009&action=edit 26] [http://2009.igem.org/IllinoisTools/27_June_2009 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_June_2009&action=edit 28]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_June_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_June_2009&action=edit 30]
July
MTWTFSS
    [http://2009.igem.org/wiki/index.php?title=IllinoisTools/1_July_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_July_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_July_2009&action=edit 3] [http://2009.igem.org/IllinoisTools/4_July_2009 4] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_July_2009&action=edit 5]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_July_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_July_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_July_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_July_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_July_2009&action=edit 10] [http://2009.igem.org/IllinoisTools/11_July_2009 11] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_July_2009&action=edit 12]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_July_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_July_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_July_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_July_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_July_2009&action=edit 17] [http://2009.igem.org/IllinoisTools/18_July_2009 18] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_July_2009&action=edit 19]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_July_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_July_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_July_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_July_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_July_2009&action=edit 24] [http://2009.igem.org/IllinoisTools/25_July_2009 25] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_July_2009&action=edit 26]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_July_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_July_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_July_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_July_2009&action=edit 30] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/31_July_2009&action=edit 31]
August
MTWTFSS
          [http://2009.igem.org/IllinoisTools/1_August_2009 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_August_2009&action=edit 2]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_August_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_August_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_August_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_August_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_August_2009&action=edit 7] [http://2009.igem.org/IllinoisTools/8_August_2009 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_August_2009&action=edit 9]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_August_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_August_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_August_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_August_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_August_2009&action=edit 14] [http://2009.igem.org/IllinoisTools/15_August_2009 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_August_2009&action=edit 16]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_August_2009&action=edit 17] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_August_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_August_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_August_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_August_2009&action=edit 21] [http://2009.igem.org/IllinoisTools/22_August_2009 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_August_2009&action=edit 23]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_August_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_August_2009&action=edit 25] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_August_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_August_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_August_2009&action=edit 28] [http://2009.igem.org/IllinoisTools/29_August_2009 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_August_2009&action=edit 30]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/31_August_2009&action=edit 31]
September
MTWTFSS
  [http://2009.igem.org/wiki/index.php?title=IllinoisTools/1_September_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_September_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_September_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_September_2009&action=edit 4] [http://2009.igem.org/IllinoisTools/5_September_2009 5] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_September_2009&action=edit 6]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_September_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_September_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_September_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_September_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_September_2009&action=edit 11] [http://2009.igem.org/IllinoisTools/12_September_2009 12] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_September_2009&action=edit 13]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_September_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_September_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_September_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_September_2009&action=edit 17] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_September_2009&action=edit 18] [http://2009.igem.org/IllinoisTools/19_September_2009 19] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_September_2009&action=edit 20]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_September_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_September_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_September_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_September_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_September_2009&action=edit 25] [http://2009.igem.org/IllinoisTools/26_September_2009 26] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_September_2009&action=edit 27]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_September_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_September_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_September_2009&action=edit 30]
October
MTWTFSS
      [http://2009.igem.org/wiki/index.php?title=IllinoisTools/1_October_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_October_2009&action=edit 2] [http://2009.igem.org/IllinoisTools/3_October_2009 3] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_October_2009&action=edit 4]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_October_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_October_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_October_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_October_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_October_2009&action=edit 9] [http://2009.igem.org/IllinoisTools/10_October_2009 10] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_October_2009&action=edit 11]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_October_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_October_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_October_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_October_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_October_2009&action=edit 16] [http://2009.igem.org/IllinoisTools/17_October_2009 17] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_October_2009&action=edit 18]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_October_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_October_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_October_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_October_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_October_2009&action=edit 23] [http://2009.igem.org/IllinoisTools/24_October_2009 24] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_October_2009&action=edit 25]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_October_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_October_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_October_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_October_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_October_2009&action=edit 30] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/31_October_2009&action=edit 31]

7/19-7/25

Donny

I worked with Nate on exporting the results of the web page (specifically CSV). I also spent a large amount of time reorganizing the website (for easier navigation and also to more clearly display the results).

Nate

This week, I worked a lot on the design of our wiki. Now that we have finally decided on a name for our web-tool, IMPtools, I was able to create a logo for our website. This logo I have also included on our wiki. In addition to this logo, I have also developed more graphics to personalize each section of our wiki page. I also redesigned our navigation bar, as the old one was a bother. Towards the end of the week, I also worked on the possibility of CSV file export for our web-tool. Ideally, we hope to be able to export a user's results/data in a CSV file format so that they can open it up in Microsoft Excel. I was not so successful with this, but fortunately Donny was able to figure out how to get a csv file to be exported from our web-tool. Now all we need to do is format the file that is to be exported. We still have a lot of work to do for our web-tool, such as the look and feel of the website.

Palak

Over past few days I took the dictionaries that Nate assembled and put them in our database. I also spent some time taking the scripts he wrote to assemble the dictionaries and turning them into scripts that would update the database. I ran into difficulty trying to write some of them such that they only updated the database rather than rewriting the whole thing.

Riyad

Looking over how to make a s-matrix

Kanishka

Read articles and looked into other software tools that provided similar features like metabolic pathway modeling and analyzing biological networks.

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