August/8 August 2009

From 2009.igem.org

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Line 5: Line 5:
(plate number)-(location on plate)  (no. of colonies)
(plate number)-(location on plate)  (no. of colonies)
-----------------------------------------------------------
-----------------------------------------------------------
-
             2-12H                        none
+
             [http://partsregistry.org/wiki/index.php?title=Part:BBa_K081020 2-12H]                       none
-
             1-12C                        none
+
             [http://partsregistry.org/wiki/index.php?title=Part:BBa_R0071 1-12C]                       none
-
             1-12A                        none
+
             [http://partsregistry.org/wiki/index.php?title=Part:BBa_R0079 1-12A]                       none
-
             2-24G                        none
+
             [http://partsregistry.org/wiki/index.php?title=Part:BBa_F1610 2-24G]                       none
-
             2-18F                        none
+
             [http://partsregistry.org/wiki/index.php?title=Part:BBa_K118013 2-18F]                       none
                                                  
                                                  
-
             1-6O                        ~10
+
             [http://partsregistry.org/wiki/index.php?title=Part:BBa_R0062 1-6O]                         ~10
-
             1-10K                        ~10
+
             [http://partsregistry.org/wiki/index.php?title=Part:BBa_R0077 1-10K]                       ~10
-
             1-18L                        ~10
+
             [http://partsregistry.org/wiki/index.php?title=Part:BBa_I14017 1-18L]                       ~10
Line 22: Line 22:
(sample No.) (concentration)  [260/280] [260/230]
(sample No.) (concentration)  [260/280] [260/230]
---------------------------------------------------
---------------------------------------------------
-
     1-23L       24.9 ng/uL    1.77      1.77
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_B0015 B0015](1-23L)          24.9 ng/uL    1.77      1.77
-
     2-16F      36.0 ng/uL    1.77      1.99
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_K118002 K118002](2-16F)       36.0 ng/uL    1.77      1.99
-
     1-8O       19.3 ng/uL    1.65      1.59
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_I0462 I0462](1-8O)            19.3 ng/uL    1.65      1.59
-
     1-2M       18.4 ng/uL    1.64      2.01
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_B0034 B0034](1-2M)            18.4 ng/uL    1.64      2.01
-
     1-19B      40.9 ng/uL    1.56      0.83
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_I742158 I742158](1-19B)       40.9 ng/uL    1.56      0.83
-
     2-16H      27.7 ng/uL    1.68      1.38
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_K118003 K118003](2-16H)       27.7 ng/uL    1.68      1.38
-
     1-14D         9.3 ng/uL    1.66      2.31
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_C0076 C0076](1-14D)            9.3 ng/uL    1.66      2.31
-
     2-8M         9.9 ng/uL    1.65      1.90
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_C0179 C0179](2-8M)            9.9 ng/uL    1.65      1.90
-
     2-16M       24.6 ng/uL    1.72      1.24
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_S03878 S03878](2-16M)        24.6 ng/uL    1.72      1.24
-
     1-14F         2.5 ng/uL    1.11      0.25 ←×
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_C0077 C0077](1-14F)            2.5 ng/uL    1.11      0.25   failure?
-
     1-23J       ×
+
     [http://partsregistry.org/wiki/index.php?title=Part:BBa_I1466 I1466](1-23J)            failure
Line 41: Line 41:
<tr>
<tr>
<td width="257"> </td>
<td width="257"> </td>
-
<td>uL</td>
+
<td><B>uL</b></td>
</tr>
</tr>
<tr>
<tr>
-
<td>EcoRⅠ</td>
+
<td>EcoRI</td>
<td>1</td>
<td>1</td>
</tr>
</tr>
<tr>
<tr>
-
<td>SpeⅠ</td>
+
<td>SpeI</td>
<td>1</td>
<td>1</td>
</tr><tr>
</tr><tr>
Line 58: Line 58:
</tr>
</tr>
<tr>
<tr>
-
<td>TOTAL</td>
+
<td>total</td>
<td>20</td></tr>
<td>20</td></tr>
</table>
</table>
-
↓   
+
↓  <br>
-
37℃,22hr   
+
37°C,22hr<br>  
-
↓  
+
<br>
-
× (SYBR Safe : 30min???)
+
failure (SYBR Safe : 30min???)<br>
 +
<br>
 +
 
 +
[https://2009.igem.org/Team:Osaka/NOTES back to NOTES]

Latest revision as of 07:37, 12 October 2009

Today we carried out the following procedures (in rough chronological order):

1. Checked the cell cultures transformed and plated out yesterday (8/7) for colony formation and made an approximate count of the number of colonies.

(plate number)-(location on plate) (no. of colonies)


            [http://partsregistry.org/wiki/index.php?title=Part:BBa_K081020 2-12H]                        none
            [http://partsregistry.org/wiki/index.php?title=Part:BBa_R0071 1-12C]                        none
            [http://partsregistry.org/wiki/index.php?title=Part:BBa_R0079 1-12A]                        none
            [http://partsregistry.org/wiki/index.php?title=Part:BBa_F1610 2-24G]                        none
            [http://partsregistry.org/wiki/index.php?title=Part:BBa_K118013 2-18F]                        none
                                               
            [http://partsregistry.org/wiki/index.php?title=Part:BBa_R0062 1-6O]                         ~10
            [http://partsregistry.org/wiki/index.php?title=Part:BBa_R0077 1-10K]                        ~10
            [http://partsregistry.org/wiki/index.php?title=Part:BBa_I14017 1-18L]                        ~10


2. Conducted a 'miniprep' to harvest and check concentration of plasmids from 10 sample. (incubated since yesterday 8/7~) Result of Nanodrop concentration check:

(sample No.) (concentration) [260/280] [260/230]


    [http://partsregistry.org/wiki/index.php?title=Part:BBa_B0015 B0015](1-23L)           24.9 ng/uL     1.77      1.77
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_K118002 K118002](2-16F)       36.0 ng/uL     1.77      1.99
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_I0462 I0462](1-8O)            19.3 ng/uL     1.65      1.59
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_B0034 B0034](1-2M)            18.4 ng/uL     1.64      2.01
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_I742158 I742158](1-19B)       40.9 ng/uL     1.56      0.83
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_K118003 K118003](2-16H)       27.7 ng/uL     1.68      1.38
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_C0076 C0076](1-14D)            9.3 ng/uL     1.66      2.31
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_C0179 C0179](2-8M)             9.9 ng/uL     1.65      1.90
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_S03878 S03878](2-16M)         24.6 ng/uL     1.72      1.24
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_C0077 C0077](1-14F)            2.5 ng/uL     1.11      0.25   failure?
    [http://partsregistry.org/wiki/index.php?title=Part:BBa_I1466 I1466](1-23J)            failure


3. gel electrophoresis

uL
EcoRI 1
SpeI 1
10*Buffer No.2 2
DNA (EpsE) 5
total 20



37°C,22hr

failure (SYBR Safe : 30min???)

back to NOTES