"
Team:BCCS-Bristol/Modeling
From 2009.igem.org
(Difference between revisions)
| Line 7: | Line 7: | ||
|- | |- | ||
|width="50%"|<center>[[Team:BCCS-Bristol/Modeling/BSim|The BSim Framework]]</center> | |width="50%"|<center>[[Team:BCCS-Bristol/Modeling/BSim|The BSim Framework]]</center> | ||
| - | |width="50%"|<center>[[Team:BCCS-Bristol/ | + | |width="50%"|<center>[[Team:BCCS-Bristol/Modeling_OMVs|Outer Membrane Vesicles]]</center> |
|- | |- | ||
|Find out more about the BSim Platform. | |Find out more about the BSim Platform. | ||
Revision as of 22:23, 18 October 2009
BCCS-Bristol
iGEM 2009
iGEM 2009
| Find out more about the BSim Platform. | Find out how we used BSim to simulate OMV based communication for our project. |
Modelling
This year, in order to motivate the work in the wetlab, we have improved last year's award winning BSim software package. BSim is a free, open source, software package for stochastic simulation of interacting bacterial populations. The package has been improved this year to include more biological features as well as a clearer more user-friendly implementation. See below for details of the BSim package and see this page for more details of its feature set.
Many new features have been added and the process of creating simulation files has been made much more versatile and adaptable allowing for a wide range of biological situations to be simulated. See here for a brief introduction to the creation of BSim simulations.
Links
- Repressilators coupled by quorum sensing
- Modelling ideas
- To do list
- [http://code.google.com/p/bsim-bccs/ Google Code subversion repository].
