Team:USTC Software/Notebook
From 2009.igem.org
(→Future Plan) |
(→GUI (Xiaomo Yao)) |
||
Line 78: | Line 78: | ||
| | | | ||
===GUI (Xiaomo Yao)=== | ===GUI (Xiaomo Yao)=== | ||
+ | |||
+ | ====Jun. 15, 2009==== | ||
+ | Start GUI design | ||
+ | [[Image:yxm1.png|left|200px|thumb]] | ||
+ | |||
+ | |||
+ | ====Jul. 26, 2009==== | ||
+ | Start GUI project | ||
+ | Vedio Commu. | ||
+ | |||
+ | ====Jul. 27, 2009==== | ||
+ | Form created, with MDI & dock windows | ||
+ | GUI version 090727 released | ||
+ | [[Image:yxm2.png|left|200px|thumb]] | ||
+ | |||
+ | ====Aug. 4, 2009==== | ||
+ | XML editor finished | ||
+ | |||
+ | ====Aug. 13, 2009==== | ||
+ | Start developing layout drawing canvas | ||
+ | [[Image:yxm3.png|left|200px|thumb]] | ||
+ | |||
+ | ====Aug. 22, 2009==== | ||
+ | Layout drawing canvas developed; Reactions and modifiers enabled | ||
+ | [[Image:yxm4.png|left|200px|thumb]] | ||
+ | |||
+ | ====Aug. 26, 2009==== | ||
+ | Layout drawing canvas completed | ||
+ | [[Image:yxm5.png|left|200px|thumb]][[Image:yxm6.png|left|200px|thumb]][[Image:yxm7.png|left|200px|thumb]][[Image:yxm8.png|left|200px|thumb]] | ||
+ | |||
+ | |||
+ | ====Aug. 27, 2009==== | ||
+ | GUI version 090827 released | ||
+ | [[Image:yxm8.png|left|200px|thumb]] | ||
+ | |||
+ | ====Aug. 31, 2009==== | ||
+ | Start programming interface with identification/analysis algorithms | ||
+ | |||
+ | ====Oct. 5, 2009==== | ||
+ | Interface developed | ||
+ | |||
+ | |||
+ | ====Oct. 16, 2009==== | ||
+ | Interface completed | ||
+ | GUI version 091017 released | ||
+ | [[Image:yxm9.png|left|200px|thumb]][[Image:yxm10.png|center|200px|thumb]][[Image:yxm11.png|right|200px|thumb]] | ||
- | |||
|- | |- | ||
| | | | ||
+ | |||
===I/O SBML (Jiahao Li)=== | ===I/O SBML (Jiahao Li)=== | ||
Revision as of 04:58, 21 October 2009
About | Team and People | Project | Standard | Notebook | Demo | Safety | External Links |
---|
|
Opening RemarkIt's time to move from paper to website. We might recall the ever first plan and ambition when we first set feet on the software designing track. The following documentations record word by word the way how we are here. Calendar and EventsWork Distribution
Future PlanOur detailed future plan about ABCD Suite is discussed in form of FAQ HERE. Closure - End or And?We hold in hands the same motivation to adventure, unfold and appreciate the secret of life via the way of virtual evolution and simulation. The seven of us major from automation to engineering, mathematics to physics, grading from freshman to PhD candidates. Though there had been hard times, we have a faith. More hopefully, we’d express our gratitude to the kind support from the School of Life Science of USTC, which makes all impossible possible. From the one-month brainstorm we collected our first proposal – construct virtual bacteria. Yet, for some practical reasons we then shifted to a second proposal, which narrowed to molecular level simulation and later on turned out to be the prototype of our present project. From the one-month brainstorm we collected our first proposal – construct virtual bacteria. Yet, for some practical reasons we then shifted to a second proposal, which narrowed to molecular level simulation and later on turned out to be the prototype of our present project. What do we desire to realize? In short, just tell us what you want your bio-device to behave, and we will return you with a list of eligible formation strategies for your design, of course, with bio-bricks. Turgidly as the idea might appear to be, this is basically an adoption of the gist of reverse engineering and evolution. By intake the custom-designated behaviors, we search, sometimes traverse, the solution space formed by nearly-inexhaustible combination of Biobricks. In order to make the simulative process applicable and practical, we employed a couple of algorithms widely used in computational sciences like Metropolis method and Dijkstra Algorithm to cut down the time cost and optimize the final result. Analysis on sensitivity and robustness has also been carried out to escort a reliable output of the final list of Biobrick combinations. Now we have an ABCD for reconstruction of bio-network, or rather, all ODE systems theoretically. But there still exist many more defects and more inspirations on a higher level. Therefore, instead of fixing 'The End' to the last line of our notebook, we'd rather define another 'and...' clause, claiming another start for greater good. See ya iGEM2010! |
|