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Team:USTC/Modeling/Model-11
From 2009.igem.org
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We employed an ODE model. In this system,we assumed the synthesis rate of TetR, LuxR, cI and LuxI were totally decided by the Promoter before them, and the concentration of them were constant. | We employed an ODE model. In this system,we assumed the synthesis rate of TetR, LuxR, cI and LuxI were totally decided by the Promoter before them, and the concentration of them were constant. | ||
| - | [[Image:sm-11-1.jpg| | + | [[Image:sm-11-1.jpg|700px]] |
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| - | [[Image:sm11-2.jpg| | + | [[Image:sm11-2.jpg|800px]] |
In above equations, all parameters could be obtained from our previous models. For instance, the kkk was estiamted in the [[Team:USTC/Modeling/Model-3|'''Simplified Model-3''']], the kk was calculated in the [[Team:USTC/Modeling/Model-2|'''Simplified Model-2''']], and the k<sub>21</sub>, rAHL<sub>in</sub> were available in [[Team:USTC/Modeling/Model-5|'''Simplified Model-5''']]. The PoPS<sub>cI</sub> cloud be calculated in [[Team:USTC/Modeling/Model-6|'''Simplified Model-6''']], dependenting on the PoPS before it. | In above equations, all parameters could be obtained from our previous models. For instance, the kkk was estiamted in the [[Team:USTC/Modeling/Model-3|'''Simplified Model-3''']], the kk was calculated in the [[Team:USTC/Modeling/Model-2|'''Simplified Model-2''']], and the k<sub>21</sub>, rAHL<sub>in</sub> were available in [[Team:USTC/Modeling/Model-5|'''Simplified Model-5''']]. The PoPS<sub>cI</sub> cloud be calculated in [[Team:USTC/Modeling/Model-6|'''Simplified Model-6''']], dependenting on the PoPS before it. | ||
Latest revision as of 03:10, 22 October 2009
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Team:USTC/Modeling/Model-11
Contents |
pConX3+mRFP+cI+pcI+LuxI+tetR+pConX1+LuxI+pConX2+LuxR+pLux/Tet+ccdB
Parts:
Simplified Model-11
To get the datails of the model-processing, click Simplified Model-2
We employed an ODE model. In this system,we assumed the synthesis rate of TetR, LuxR, cI and LuxI were totally decided by the Promoter before them, and the concentration of them were constant.
To simplify the model, the (Recation S11-4), (Recation S11-5), (Recation S11-10), (Recation S11-12), (Recation S11-14), (Recation S11-15), (Recation S11-16), (Recation S11-17) and (Recation S11-18) were considered to be able to get balance in a very short time.
In above equations, all parameters could be obtained from our previous models. For instance, the kkk was estiamted in the Simplified Model-3, the kk was calculated in the Simplified Model-2, and the k21, rAHLin were available in Simplified Model-5. The PoPScI cloud be calculated in Simplified Model-6, dependenting on the PoPS before it.
