Team:NTU-Singapore/Project/Wetlab

Conclusive Results

Our working constructs!

• The first construct, J23119-B0034-NorR-B0015, is a system construct, in that it was intended for our system to feature this as a functional part.
• The second construct, J23119-B0034-GFP-B0015, is a characterization construct to characterize the modular function of the J23119 promoter in the transcription of NorR.
• The third construct, Lac(R0010)-B0034-CHE-B0015, is also a test construct to only test and characterize the enzymatic activity of CHE.
• The fourth construct, J23119-B0034-IFP-B0015-J23119-B0034-HO1(I15008)-B0015, is a test construct to only test the reporting ability of IFP.

J23119-B0034-NorR-B0015 (K256007)

NorR is an important NO sensor that triggers the transcription at pNO. Thus, we want an NorR producing construct to improve on the sensitivity of pNO.

Double Digest verification

Successful construct verification of J23119-B0034-NorR-B0015 by Double Digestion!

Since the sole purpose of J23119-B0034-NorR-B0015 is to produce NorR, we shall dwell into the factors that might affect the production of the protein. The transformed cells were incubated at 3 different environmental temperatures (30 / 37 / 42°C).

SDS PAGE characterization was carried out (top right).

It has been observed that at elevated temperature, i.e. 42°C, production of NorR had decreased as shown by the diminished intensity (see 2nd lane). The production of NorR at 30°C and 37°C carried no significant difference.

Characterization of J23119 (K256003)

Since J23119 was used as the constitutive promoter for NorR producing construct, it is necessary for us to understand its modular function and how it would affect NorR production.

Preliminary characterisation of J23119 showed that the activity of the promoter to be the strongest at 25°C and weakest at 37°C with 30°C being something of an intermediate. Activity of the J23119 was independent of time. Noteworthy was that there was a drastic drop in activity of the J23119 promoter at 16min, 37°C.

It shows that the supplemented M9 medium is the ideal choice for the characterization of the J23119 promoter. M9 is most likely to be the ideal medium for characterisation of other promoters in general.

Vector backbone did not seem to have much of an effect on the strengths of J23119, although pSB1A2 has a slight positive effect on the activity of the J23119.

Based on our preliminary characterization results, it appeared that J23101 produced a much stronger signal than J23119 and pTet. This was quite surprising because J23119 family is supposed to be stronger then the J23101 family.

J23119 performance appeared to be the best in Origami B.

R0010-B0034-CHE-B0015 (K256028)

To examine the enzymatic activity of cholesteryl esterase, a test construct was synthesized. CHE production was induced by l0mM lactose. The cells were sonicated, and the cell lysate containing CHE was characterized using Amplex® Red Cholesterol Assay Kit. The characterization results is shown below.

Cholesterol Assay with CHE Construct

From the graph, the cell lysate containing CHE had achieved higher fluorescence readings than the negative control. The increase in fluorescence reading is due to enzyme-coupled reaction that detects free cholesterol concentration. Hence, we have proven that CHE had indeed been produced from this construct and had been working to our expectation.