Team:Aberdeen Scotland/WetLab/quorumsensing/results

Results and Discussion

Aims and background for testing our Quorum Sensing construct

In our first experimental set-up, we wanted to test whether our Quorum Sensing construct (further referred to as pIR) works on its own, and induces a pLux promotor to enhance trancription. The testing construct , which was used, consists of a pLux promoter and the gene for the green fluorescence protein. Therefore, it is expected that without Quorum Sensing construct no fluorescence occur.

For this purpose SCS1 E.coli cells were transformed with 1) pIR alone, 2) alone, and 3) pIR and J37032 together. The first one is the negative control. Without any GFP gene inside the cells they should not fluorescence. The second set of cells should show no fluorescence as the promoter needs to be activated by Quorum Sensing or only to a small degree due to leakiness of the promoter. The third set should show low fluorescence at low cell density and high fluorescence at high cell density.

Pictures were taking from over night cultures, i.e. at high cell density, under a light microscope (left hand-side) and a fluorescence microscope (right hand-side) from the 3 different SCS1 E.coli cell transformances. No fluorescence were shown on the pIR only transformance. However, the J37032 transformance shows as high a fluorescent as the double transformance.

Those results suggest that is not responsive to Quorum Sensing as it does not need LuxI/LuxR to produce GFP. Or as an alternative the pLux promoter could be extremely leaky. Hence, the pIR construct was further tested with the pLux responsive promoter construct this team created.

Apart from testing the pIR construct, the AND-gate, i.e. part (further referred to as pLG) was also tested in this experimental set-up. needs two inputs to initiate the transcription of GFP, firstly IPTG to release LacO repression and secondly Quorum Sensing for triggering the pLux promoter.

SCS1 cells were transformed with either 1) pTrc99A and pIR, 2) pTrc99A and pLG or 3) pTrc99A, pIR and pLG. The plasmid pTrc99A contains the gene lacI^q which over-produces LacI. This is needed to sufficiently suppress the Lac operator in the pLG construct in the starting cultures. It is expected that a high fluorescence occurs only in the third triple transformed cells and only when IPTG is added and the cells are at a high density. The first one is lacking the gene for GFP and hence should show no fluorescence at all. Whereas, the second one lacks Qourum Sensing producing part and thereby should not show fluorescence at any cell density and whether ITPG is added or not. However, adding IPTG releases the LacO repression and hence some GFP production might result from a leaky promoter.

Below graph and pictures show the negative control. All measurements in this experiments were taken with the help of a fluorimeter at a wavelength of 514.5nm. As this strain of transformances should not have any fluorescence this first set of values were said to be the background reading of the cells and the mean of those values were subtracted from all of the following measurements before the graphs were plotted. Also, under the fluorescence microscope no fluorescence were observed as expected.

The second control was the SCS1 strain transformed with pTrc99A and pLG. It is expected that when grown with or without IPTG no fluorescence occurs. When grown with IPTG there might occur some fluorescence due to leakiness of the pLux promoter. The results below show hardly any fluorescence for the culture grown without IPTG, but a high fluorescence when grown with IPTG. Measurements of fluorescence were taken after the cells reached an optical density of 0.200 at 600nm. This was chosen because it is suggested that Quorum Sensing only switches on at a much higher density than this.

Those results indicate that the Lac operator works as expected and is sufficiently repressed by LacI as no fluorescence occurs without IPTG. However, as no Quorum Sensing construct is transformed into this cell strain, the occuring fluorescence when adding IPTG cannot be due to Quorum Sensing and therefore leads to the belief that the pLux promoter is either extremely leaky or not responsive to LuxR/LuxI and does not function as predicted.

The next diagram shows the fluorescence of the triple transformed cells over cell density, grown with and without IPTG. Similar results than the pLG/pTrc99A transformance are observed. There is hardly any fluorescence present when no IPTG is present in the cell culture, however, a lot of fluorescence when IPTG is added. In this case this is actually expected at high cell density, as both inputs of the AND-gate - IPTG and Quorum Sensing - are provided. Never the less, Quorum Sensing appears to be switched on at low cell density as at the first measuring time of 240 minutes the optical density of the cultures were only 0.2 at a wavelength of 600nm. However, when the results from the double transformance pLG/pTrc99A are taken into account than this fluorescence might be the outcome of a malfunctioning pLux promoter.

Furthermore, two cultures were grown without IPTG up to an optical denisty of 1.0 at 600nm wavelength. This was done for the transformances with 1) pLG and pTrc99A and 2) pIR, pLG and pTrc99A. At this cell density it is presumed that some Quorum Sensing occurs in the second culture, but not in the first culture as no pIR construct is present. The picture below shows the first culture. It suggest that a high fluorescence occurs in a relative short time, i.e. 20 minutes. This leads to the believe that as in above experiments the AND-gate can be triggered by one input (the IPTG adding) alone and does not need Quorum Sensing.

It therefore is expected that as soon as IPTG is added the AND-gate is switched on and GFP production is triggered. The time delay until fluorescence is developing than represents the time need to release the repression from the Lac operator.

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