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References
- Akita M, Sasaki S, Matsuyama S, Mizushima S (1990) J Biol Chem 265:8164-8169
- Albert F, Anderson A (1987) The effect of Pseudomonas putida colonization on root surface peroxidase. Plant Physiol 85: 537-541
- Anderson AJ, Dawes EA (1990) Occurrence, metabolism, metabolic role, and industrial uses of bacterial polyhydroxyalkanoates. Microbiol Rev 54:450-472
- Bakker PAHM, Lamers JG, Bakker AW, Marugg JD, Weisbeek PJ, Schippers, B (1986) The role of siderophores in potato tuber yield increase by Pseudomonas putida in a short rotation of potato. Neth J Pl Path 92: 249-256
- Barrett CML, Ray N, Thomas JD, Robinson C, Bolhuis A (2003) Quantitative export of a reporter protein, GFP, by the twin-arginine translocation pathway in Escherichia coli. Biochem BIophys Res Comm 304:279-284
- Berks BC (1996) Mol Microbiol 22:393-404
- Berks BC, Sargent F, Palmer T (2000) The Tat protein export pathway. Mol Microbiol 35:260-274
- Binet,R, Letoffe S, Ghigo JM, Delepelaire P, Wandersman C. Protein secretion by Gram-negative bacterial ABC exporters-a review. Gene 1997;192:7-11
- Blight MA, Holland IB (1994) Heterologous protein secretion and the versatile Escherichia coli haemolysin translocator. Trends Biotechnol 12:450-455
- Cao TB, Saier MH (2003) The general protein secretory pathway:phlyogenetic analyses leading to evolutionary conclusions. Biochimica et Biophysica Acta 1609:115-125
- Chalfie M, Tu Y, Euskirchen G, Ward W, and Prasher D. (1994) Green fluorescent protein as a marker for gene expression. Science 263:802-805
- Choi J (1999) Factors affecting the economics of polyhydroxyalkanoate production by bacterial fermentation. Appl Microbiol Biot 51:13-21
- Choi J, Lee SY (1997) Process analysis and economic evaluation for poly-β-hydroxybutyrate production by fermentation. Bioprocess Eng 17:335-342
- Choi JH, Lee SY (2004) Secretory and extracellular production of recombinant proteins using Escherichia coli Appl Microbiol Biotechnol 64:625-635
- Cianciotto NP (2005) Type II Secretion: A Protein Secretion System for all Seasons. Trends in Microbiology 13:581-588
- Crameri A, Whitehorn E, Tate E, Stemmer W. (1996) Improved green fluorescent protein by molecular evolution using DNA shuffling. Nature Biotech 14:315-19.
- Cristobal S, de Gier JW, Nielsen H, von Heijne G (1999) Competition between Sec- and Tat-dependent protein translocation in Escherichia coli EMBO J 18:2982-2990
- Desveaux M, Parham N, Scott-Tucker A, Henderson IR (2004) The general secretory pathway: a general misnomer. Trends Micro 12:306-309
- Doi Y (1990) Microbial Polyester. VCH, New York
Fernandez LA, de Lorenzo V (2001) Fomration of disulphide bonds during secretion of proteins through the periplasmic-independent type I pathway. Mol Microbiol 40:332-346
- Gentschev I, Goebel W (2003) Type I protein secretion systems in gram-negative bacteria: Escherichia coli alpha-hemolysin secretion. In: Oudega B, editor. Kluwer Academic Publishers, pp.121-139
- Gombos, Z, Wada, H, Murata, N (1992) Unsaturation of fatty acids in membrane lipids enhances tolerance of the cyanobacterium Synechocystis PCC6803 to low-temperature photoinhibition. Proc Natl Acad Sci 89: 9959-9963
- Haas D, Defago G (2005) Biological control of soil-borne pathogens by fluorescent pseudomonads. Nat Rev Microbiol 3: 307-320
- Hearn MT, Acosta D (2001) Applications of novel affinity cassette methods: Use of peptide fusion handles for the purification of recombinant proteins. J Mol Recognit 14:323-369
- Haller C.A., & Dichristina, T.J. (2002). Genetic approaches in bacteria with no natural genetic systems. New York, NY: Wiley-Liss, Inc.
- Hess J, Gentschev I, Goebel W, Jarchau T (1990) Analysis of the haemolysin secretion system by PhoA-HlyA fusion proteins. Mol Gen Genet 224:201-208
- Invitrogen Corporation (2009) Cloning of A-tailed PCR fragments using conventional ligase method. Retrieved October 2009. https://commerce.invitrogen.com
- Irisarri P, Gonnet S, Monza J (2001) Cyanobacteria in Uruguayan rice fields: diversity, nitrogen fixing ability and tolerance to herbicides and combined nitrogen. Biotechnology 91: 95-103
- Jung IL, Phyo KH, Kim KC, Park HK, Kim IG (2005) Spontaneous liberation of intracellular polyhydroxybutyrate granules in Escherichia coli. Res Microbiol 156:865-873
- Kaderbhai MA, Davey HM, Kaderbhai NN (1997) A directed evolution strategy for optimized export of recombinant proteins reveals critical determinants for preprotein discharge. Protein Science 13:2458-2469
- Koster M, Bitter W, Tommassen J (2000) Protein secretion mechanisms in Gram-negative bacteria. Int J Med Microbiol 290:325-331
- Kucho K, Okamoto K, Tsuchiya Y, Nomura S, Nango M, Kanehisa M et al. (2005) Global analysis of circadian expression in the cyanobacterium Synechocystis sp. Strain PCC 6803. J Bact 187: 2190-2199
- Lavallie ER, McCoy JM (1995) Gene fusion expression systems in Escherichia coli.Current Biology Ltd 501-506
- Lee SY (1996) Bacterial Polyhydroxyalkanoates. Biotechnol Bioeng. 49:1-14
- Lemanceau P, Bakker PAHM, De Kogel WJ, Alabouvette C, Schippers B (1992) Effect of pseudobactin 358 production by Pseudomonas putida WCS358 on suppression of fusarium wilt of carnations by nonpathogenic Fusarium oxysporum Fo47. Appl Environment Micro 58:2978-2982
- Luirink J, Oudega B Protein targeting to the inner membrane. In: Oudega B, editor. Kluwer Academic Publishers, pp 1-21
- Mackenzie C, Eraso JM, Choudhary M, Roh JH, Zeng X, Bruscella P et al.(2007) Postgenomic Adventures with Rhodobacter sphaeroides 61: 283-307
- Madison LL, Huisman GW (1999) Metabolic engineering of poly (3-hydroxyalkanoates): from DNA to plastic. Microbiol Mol Biol R 63:21-53
- Maehara A, Ueda S, Nakano H, Yamane T (1999) Analyses of a polyhydroxyalkanoic acid granule-associated 16-kilodalton protein and its putative regulator in the pha locus of Paracoccus denitrificans. J Bacteriol 191:2914-2921
- Mergulhão, FJM, Summers DK, Monteiro (2005) Recombinant protein secretion in Escherichia coli Biotechnol Adv 23:177-202
- Molhoj M (2004) Leader sequences are not signal peptides. Nat Biotech 22:1502
- Nelson KE, Weinel C, Paulsen IT, Dodson RJ, Hilbert H, Martins dos Santos VA, et al. (2002) Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ Microbiol 4: 799–808
- O’Gara JP, Gomelsky M, Kaplan S (1997) Identification and molecular genetic analysis of multiple loci contributing to high-level tellurite resistance in Rhodobacter sphaeroides 2.4.1. Appl Environ Microbiol 63: 4713-4720
- Palmer T, Berks BC (2004) The Tat protein export pathway In: Oudega B, editor. Kluwer Academic Publishers, pp 51-64
- Phillips I, Silver P (2006) A new biobrick assembly strategy designed for facile protein engineering.
- Porter RD (2002) Modern microbial genetics, 2nd ed. New York, NY: Wiley-Liss Inc.
- Prieto MA (2007) From Oil to Bioplastics, a Dream Come True? J Bacteriol 189(2):289-290
- Pugsley AP (1993) The complete general secretory pathway in gram-negative bacteria. Microbiol Rev 57:50-108
- Resch S, Gruber K, Wanner G, Slater S, Dennis D, and W Lubitz (1998) Aqueous release and purification of poly(β-hydroxybutyrate) from Escherichia coli. J Biotechnol 65:173-182.
- Roy A, Shukla AK, Haase W, Michel H (2008) Employing Rhodobacter sphaeroides to functionally express and purify human G protein-coupled receptors. Biol Chem 389: 69-78
- Sabirova JS, Ferror M, Lunsdorf H, Wray V, Kalscheuer R, Steinbuchel A, Timmis KN, Golyshin PN (2006) Mutation in a “tesB-Like” Hydroxyacyl-coenzyme A-specific thioesterase gene causes hyperproduction of extracellular polyhydroxalkanoates by Alcanivorax borkumensis SK2. J Bacteriol 188:8452-8459
- Sandkvist M (2001) Biology of type II secretion. Mol Microbiol 40:271-83
- Sandkvist M, Bagdasarian M (1996) Secretion of recombinant proteins by Gram-negative bacteria
- Santini C, Bernadac A, Zhang M, Chanal A, Ize B, Blan co C, Wu L (2001) Translocation of jellyfish green fluorescent protein via the Tat system of Escherichia coli and change of its periplasmic localization in response to osmotic up-shock. J Biol Chem 276:8159-8164
- Sapriel G, Wandersman C, Delepelaire P (2003) The SecB chaperone is bifnctional in Serratia marcescens: SecB is involved in the Sec pathway and required for HasA secretion by the ABC transporter. J Bacteriol 185:80-88
- Schatz PJ, Beckwith J (1990) Genetic analysis of protein export in Escherichia coli Annu Rev Genet 24:215-48
- Scholtz (1989) Complete nucleotide sequence and gene organization of the broad-host-range plasmid RSF1010. Gene 75:217-288
- Shimomura O, Johnson F, and Saiga Y. (1962) Extraction, purification and properties of aequorin, a bioluminescent protein from the luminous hydromedusan, Aequorea. J.Cell Comp Physiol 59:223-39
- Shokri A, Saden AM, Larsson G (2003) Cell and process design for targeting of recombinant protein into the culture medium of Escherichia coli. Appl Microbiol Biotechnol 60:654-664
- Snyder, Champness (2007) Molecular Genetics of Bacteria, 3rd ed., ASM Press
- Steinbüchel A, Füchtenbusch B (1998) Bacterial and other biological systems for polyester production. Trend Biotechnol 16:419-27
- Suriyanmongkol P, Weselake R, Narine S, Moloney M, Shah S (2007) Biotechnological approaches for the production of polyhydroxyalkanoates in microorganisms and plants – A review. Biotechnol Adv. 25:148-175
- Tabei Y, Okada K, Tsuzuki M (2007) SII1330 controls the expression of glycolytic genes in Synechocystis sp. PCC 6803. Biochem Biophys Res Commun 355: 1045-1050
- Thomas JD, Daniel RA, errington J, Robinson C (2001) Export of Active green fluorescent protein to the periplasm by the twin-arginine translocase (Tat) pathway in Escherichia coli. Mol Microbiol 39:47-53
- Valent QA, Kendall DA, High S, Kusters R, Oudega B, Luirink J (1995) EMBO J 14:5494-5505
- van der Does C, Noewen N, Driessen AJM (2004) The Sec translocase. In: Oudega B, editor. Kluwer Academic Publishers, pp:23-49
- Veenendaal AKL, van der Does C, Driessen AJM (2004) The protein-conducting channel SecYEG. Biochimica et Biophysica Act 1694:81-95
- Verlinden RAJ, Hill DJ, Kenward MA, Williams CD, Radecka I (2007) Bacterial synthesis of biodegradable polyhydroxyalkanoates. J Appl Microbiol 102:1437-1449
- Von Heijne G (1986) Net N-C charge imbalance may be important for signal sequence function in bacteria. J Mol Biol 192:287-290
- Von Heijne G (1996) Principles of membrane protein assembly and structure. Prog Biophys Mol Bio 66:113-139
- Williams JGK (1988) Construction of specific mutations in photosystem II photosynthetic reaction center by genetic engineering methods in Synechocystis 6803. Method Enzymol 167: 766-778
- Wolk CP, Fan Q, Zhou R, Huang G, Lechno-Yossef S, Kuritz T, Wojciuch E. (2007) Paired cloning vectors for complementation of mutations in the cyanobacterium Anabaena sp. strain PCC 7120. Arch. Microbiol. 188:551-563
- Yokoi H, Maki R, Hirose J, Hayashi S (2002) Microbial production of hydrogen from starch-manufacturing wastes. Biomass Bioenergy 22: 389-395
- York GM, Junker BH, Stubbe J, Sinskey AJ (2001) Accumulation of the PhaP Phasin of Ralstonia eutropha is dependent on production of polyhydroxybutyrate in cells. J Bacteriol 183:4217-4226
- York GM, Stubbe J, Sinkskey AJ (2002) New insight into the role of the PhaP phasin of Ralstonia eutropha in promoting synthesis of polyhydroxybutyrate. J Bacteriol 183:2394-2397
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