Team:BCCS-Bristol/Modeling

From 2009.igem.org

(Difference between revisions)
(Steve)
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* Study whether 3D implementation of newPosition in BSimBacteriaCreate is reasonable
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* 3D tumbling in BSimBacteria
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* 3D diffusion for BSimChemicalField
* Rename bsimapp > bsimgui, logic > internalforce?
* Rename bsimapp > bsimgui, logic > internalforce?
* Delete author, date from headers?
* Delete author, date from headers?

Revision as of 14:34, 7 August 2009

BCCS-Bristol
iGEM 2009

Contents

Workflow

  • Study Team:BCCS-Bristol/Modeling/Ideas to understand high level development goals (you can add stuff to that page!)
  • Decide the specifics of what needs to be done and add items to your to-do list. Ideally the items added should read like commit messages
  • Commit to the [http://code.google.com/p/bsim-bccs/ subversion repository] and strike out the item on your to-do list, adding a reference to the commit number if possible e.g:
    • Rename BSimObject to BSimParticle r19

Todo list

Steve

  • Meet Sean Davies Monday 7th Aug re: beads - try to bring some polystyrene beads
  • Learn something more about bioscaffolds
  • Contact Paris team re:video
  • Decide whether we are talking at the synbio conference, if so, who is talking
  • Identify what batch simulations we wish to carry out asap. See [1].


  • Study whether 3D implementation of newPosition in BSimBacteriaCreate is reasonable
  • 3D tumbling in BSimBacteria
  • 3D diffusion for BSimChemicalField
  • Rename bsimapp > bsimgui, logic > internalforce?
  • Delete author, date from headers?
  • Make toolbar a nested class of app
  • Further refactoring to achieve clear and consistent class - package naming
  • Are PART_PART, PART_BACT, PART_BEAD really neccesary?
  • Add paper references to parameter values in the code using page from last year

Mattia

Emily

Antos