Team:Freiburg software/Miscellaneous

From 2009.igem.org

(Difference between revisions)
(Collaboration)
 
(16 intermediate revisions not shown)
Line 15: Line 15:
-
<p align=center>
+
<p align=center >
[[Image:FreiburgSoftware09Graph.png|200px]]
[[Image:FreiburgSoftware09Graph.png|200px]]
[[Image:Freiburg software modeling foto.JPG|200px]]
[[Image:Freiburg software modeling foto.JPG|200px]]
Line 25: Line 25:
[[Image:FreiburgSoftware09_Valencia.png|120px|Gold Medal from Team Valencia|right]]
[[Image:FreiburgSoftware09_Valencia.png|120px|Gold Medal from Team Valencia|right]]
-
We worked closely together with the [[Team:Freiburg_bioware|Freiburg_bioware Team]] , and got great feedback and ideas from them.<br>  
+
We worked closely together with the [[Team:Freiburg_bioware|Freiburg Bioware team]] , and got great feedback and ideas from them.<br>  
Additionally we
Additionally we
-
* supported [[Team:Freiburg_bioware|Freiburg_bioware]] in modeling their Reactions pathways, what included creating, partial solving and simulating an system of differential equations.  
+
* supported [[Team:Freiburg_bioware|Freiburg Bioware]] in modeling their reactions pathways. That included creating, partial solving and simulating systems of differential equations.  
-
* created Logos, Wiki-layout, T-Shirt and the Poster together with [[Team:Freiburg_bioware|Team Freiburg_bioware]]. Without their support, we would have run into serious problems doing all these things before the Jamboree. Thank you, Wetlab-Team!
+
* created logos, wiki-layout, t-shirts and the poster together with [[Team:Freiburg_bioware|team Freiburg Bioware]]. Without their support, we would have run into serious problems doing all these things before the Jamboree. Thank you, Wetlab-Team!
-
* involved Francois Le Fevre from Team [[Team:Paris|Paris]] in the creation of our project-concept and got great ideas and feedback from him. Thanks!
+
* involved Francois Le Fevre from team [[Team:Paris|Paris]] in the creation of our project-concept and got great ideas and feedback from him. Thanks!
-
* helped Team [[Team:Valencia|Valencia]] by filling out their survey (Gold Medal for 100% team participation).
+
* helped team [[Team:Valencia|Valencia]] by filling out their survey (Gold Medal for 100% team participation).
 +
* our instructor Raik is currently working in Barcelona, thus we represent already an international team not located at just one university.
=Draft specification for SynBioWave 0.2=
=Draft specification for SynBioWave 0.2=
[[Image:FreiburgSoftware09 Blip-dna.png|160px|left]]
[[Image:FreiburgSoftware09 Blip-dna.png|160px|left]]
-
If you are interested in the future of SynBioWave, you can find the specification for your upcoming release in the [[Team:Freiburg_software/Project#Road-map| Roadmap]] on our [[Team:Freiburg_software/Project|Project page]].
+
If you are interested in the future of SynBioWave, you can find the specification for your upcoming release in the [[Team:Freiburg_software/Project#Future_releases| road map]] on our [[Team:Freiburg_software/Project|Project page]].
<br style="clear: both" />
<br style="clear: both" />
=Human Practice=
=Human Practice=
 +
[[Image:FreiburgSoftware09_humanpractice.png|right|200px]]
 +
Together with team Freiburg Bioware, we created a international survey on the benefit and risk perception of Synthetic Biology.<br> [[Team:Freiburg_bioware/Human_Practice/Ethics|Read it at their page!]]
-
=Standard for sharing of BioBrick-Parts via the internet=
+
<br style="clear: both" />
-
[[Image:Freiburg software SynBioWave-flowchart.png|170px|left]]
+
 
-
The SynBioWave-Framework provides a standardized way to share BioBrick-Parts inside Google Wave via the internet. See our [[Team:Freiburg_software/Project|Project page]] for explanations and documentation.
+
=Safety=
 +
When planning our project and writing our code we were considered the following safety and security issues: data safety, identity theft, malicious software, collection of personal data by Google, and biosecurity during parts and device design. We would not have started our project if Google would not have announced that the wave technology will become open source. According to the wave federation protocol everyone can host his own wave server and control access and security issues. The nature of the open source will ensure that no hidden malicious code is distributed and that updates can be controlled by the community. Our wave approach automatically provides remote storage and at the same time the user can save a local copy. This redundancy ensures data safety.
 +
 
 +
We hope that a future wave robot testing for pathogenic parts and assemblies will help to increase biosafety of synthetic laboratory work.

Latest revision as of 22:13, 21 October 2009


FreiburgSoftware09Graph.png Freiburg software modeling foto.JPG FreiburgSoftware09 3dGraph.png FreiburgSoftware09 Code.png

Contents

Collaboration

Gold Medal from Team Valencia

We worked closely together with the Freiburg Bioware team , and got great feedback and ideas from them.
Additionally we

  • supported Freiburg Bioware in modeling their reactions pathways. That included creating, partial solving and simulating systems of differential equations.
  • created logos, wiki-layout, t-shirts and the poster together with team Freiburg Bioware. Without their support, we would have run into serious problems doing all these things before the Jamboree. Thank you, Wetlab-Team!
  • involved Francois Le Fevre from team Paris in the creation of our project-concept and got great ideas and feedback from him. Thanks!
  • helped team Valencia by filling out their survey (Gold Medal for 100% team participation).
  • our instructor Raik is currently working in Barcelona, thus we represent already an international team not located at just one university.

Draft specification for SynBioWave 0.2

FreiburgSoftware09 Blip-dna.png

If you are interested in the future of SynBioWave, you can find the specification for your upcoming release in the road map on our Project page.


Human Practice

FreiburgSoftware09 humanpractice.png

Together with team Freiburg Bioware, we created a international survey on the benefit and risk perception of Synthetic Biology.
Read it at their page!


Safety

When planning our project and writing our code we were considered the following safety and security issues: data safety, identity theft, malicious software, collection of personal data by Google, and biosecurity during parts and device design. We would not have started our project if Google would not have announced that the wave technology will become open source. According to the wave federation protocol everyone can host his own wave server and control access and security issues. The nature of the open source will ensure that no hidden malicious code is distributed and that updates can be controlled by the community. Our wave approach automatically provides remote storage and at the same time the user can save a local copy. This redundancy ensures data safety.

We hope that a future wave robot testing for pathogenic parts and assemblies will help to increase biosafety of synthetic laboratory work.