Team:Imperial College London/M1/Modelling

From 2009.igem.org

(Difference between revisions)
(Model for protein drug production:)
(Our goals)
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The modelling aims to provide an overview and better understanding of the M1 system’s function  by:
The modelling aims to provide an overview and better understanding of the M1 system’s function  by:
*Characterizing the system.  
*Characterizing the system.  
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*Modeling to account for several factors that may reduce/hinder the production of our output protein of interest such as:
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*Modeling to account for several factors that may reduce/hinder the production of the protein drug such as:
**Lac promoter leakiness
**Lac promoter leakiness
**IPTG toxicity
**IPTG toxicity
**Stability of output protein
**Stability of output protein
-
 
+
The conclusions from the models should help people from the [https://2009.igem.org/Team:Imperial_College_London/Wetlab Wetlab] to plan their experiments and take into account these limitations. This module is an integral part of the design, as large-scale commercialization of the drug of interest depends on finding the optimal conditions for protein production.
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Revision as of 12:16, 12 September 2009

Introduction

This module consists of producing the drug protein of interest. In order to describe the function of the module, two models have been developed.

Model for protein drug production:

Based on the Genetic circuit, a LacI-IPTG inducible promoter is responsible for kickstarting the production of the drug.

  • In the absence of IPTG, LacI represses the production of the drug (Cellulase or PAH)
  • When IPTG is introduced, the LacI repressing pathway is “de-repressed”, and some output protein is produced.

Our goals

The modelling aims to provide an overview and better understanding of the M1 system’s function by:

  • Characterizing the system.
  • Modeling to account for several factors that may reduce/hinder the production of the protein drug such as:
    • Lac promoter leakiness
    • IPTG toxicity
    • Stability of output protein

The conclusions from the models should help people from the Wetlab to plan their experiments and take into account these limitations. This module is an integral part of the design, as large-scale commercialization of the drug of interest depends on finding the optimal conditions for protein production.


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