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Team:EPF-Lausanne/Results/ELS
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Here are the values of pressure, temperature and volume for this run. | Here are the values of pressure, temperature and volume for this run. | ||
| + | [[Image:2v0w_sim_PVT.jpg|center]] | ||
| + | The rmsd along the run gives: | ||
| + | [[Image:2v0w_sim_rmsd.jpg|center]] | ||
Revision as of 15:10, 19 October 2009
Contents |
We run a a 62ns simulation on the 2v0w light state using 32 processors. Here is a video.
Validation of the simulation
Here are the values of pressure, temperature and volume for this run.
The rmsd along the run gives:
An interesting residue to study in the dark state is the residue n° 450, which is the cystein that reacts with the cofactor. Here we plot the dihedral angle of this residue to see how many time the cystein point toward the FMN:
