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| | + | {{EPF-Lausanne09}} |
| | + | <div CLASS="epfltrick">__TOC__ |
| | + | </div><div CLASS="epfl09team"> |
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| | + | <font size="12" color="#007CBC">Team Management</font> |
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| | + | =Week organisation= |
| | + | [[Image:Organisation1.png|500px|center]] |
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| | + | [[Image:Organisation2.png|center]] |
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| | + | [[Media: IGEM_week_organisation_final_p.pdf|Week organisation]] |
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| | =Summer plan= | | =Summer plan= |
| | Who is coming which week this summer ! | | Who is coming which week this summer ! |
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| | + | [[Image: Summer_plan.png|center]] |
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| | [[Media: Planning.xls|Summer Planning]] | | [[Media: Planning.xls|Summer Planning]] |
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| - | =Brainstorming=
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| - | Our project ideas so far are listed in the [[Brainstorming|Brainstorming]] section
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| | =Team Meetings= | | =Team Meetings= |
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| | [[Upcoming meetings|Upcoming meetings]]: stuff to talk about during next meeting | | [[Upcoming meetings|Upcoming meetings]]: stuff to talk about during next meeting |
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| - | =Before next meeting to do list=
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| - | ;<span style="color:Navy">URGENT</span>
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| - | #Find 12 mutants LOVTAP DNA sequence + length
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| - | #Ask for 12 mutants
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| - | #"' Find genomic sequence of LOVTAP and R-bphB"'
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| - | #Make a material list (see LOVTAP to do list)
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| - | #LOGO & WIKI
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| - | = Project subparts =
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| - | ;1) LOVTAP
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| - | :[[LOVTAP|LOVTAP project + general to do list]]
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| - | ;2) R-BphP
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| - | :[[R-BphP|R-BphP project + general to do list]]
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| - | ;3) Modelling
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| - | :[[Modelling|Modelling project + general to do list]]
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| - | =Comments=
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| - | # find the purification protocols etc. in the supplementary material, not by asking the authors
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| - | # annotate the lovtap sequence to show where the various functional domains are
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| - | # add all relevant references in the format i have given below, including the PNAS paper, etc.
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| - | =References=
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| - | # '''Photoregulation in prokaryotes.''' Purcell EB, Crosson S. Curr Opin Microbiol. 2008 Apr;11(2):168-78. Epub 2008 Apr 8. Review. [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=18400553 Pubmed]
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| - | # Strickland et al. '''Light-activated DNA binding in a designed allosteric protein.''' Proceedings of the National Academy of Sciences (2008) vol. 105 (31) pp. 10709
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| - | # Ávila-Pérez et al. '''Blue Light Activates the σB-Dependent Stress Response of Bacillus subtilis via YtvA.''' Journal of bacteriology (2006)
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| - | # Jaubert et al. '''Light and redox control of photosynthesis gene expression in Bradyrhizobium: dual roles of two PpsR.''' Journal of Biological Chemistry (2004)
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| - | # Lawson et al. '''E. coli trp repressor forms a domain-swapped array in aqueous alcohol.''' Structure (2004) vol. 12 (6) pp. 1099-1108
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| - | # Cusanovich and Meyer.'''Photoactive yellow protein: a prototypic PAS domain sensory protein and development of a common …. ''' BIOCHEMISTRY-PENNSYLVANIA THEN WASHINGTON- (2003)
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| - | # Harper et al. '''Structural basis of a phototropin light switch.''' Science (2003)
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| - | # Baliga et al. '''Coordinate regulation of energy transduction modules in Halobacterium sp. analyzed by a global systems approach.''' Proceedings of the National Academy of Sciences (2002) vol. 99 (23) pp. 14913-14918
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| - | # Baliga et al. '''Genomic and genetic dissection of an archaeal regulon.''' Proceedings of the National Academy of Sciences (2001) vol. 98 (5) pp. 2521
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| - | # Reedstrom et al. '''Affinity and specificity of trp repressor-DNA interactions studied with fluorescent oligonucleotides.''' Journal of Molecular Biology (1997) vol. 273 (3) pp. 572-585
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| - | # Gropp and Betlach. '''The bat gene of Halobacterium halobium encodes a trans-acting oxygen inducibility factor.''' Proceedings of the National Academy of Sciences (1994)
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| - | # Shand and Betlach. '''Expression of the bop gene cluster of Halobacterium halobium is induced by low oxygen tension and by ….''' Journal of bacteriology (1991)
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| - | # Bass et al. '''Mutant Trp repressors with new DNA-binding specificities.''' Science (1988) vol. 242 (4876) pp. 240-245
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| - | # Bass et al. '''DNA specificity determinants of Escherichia coli tryptophan repressor binding.''' Genes & Development (1987) vol. 1 (6) pp. 565-572
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| - | {| style="color:#1b2c8a;background-color:#0c6;" cellpadding="3" cellspacing="1" border="1" bordercolor="#fff" width="62%" align="center" | + | <!--{| style="color:#1b2c8a;background-color:#0c6;" cellpadding="3" cellspacing="1" border="1" bordercolor="#fff" width="62%" align="center" |
| | !align="center"|[[Team:EPF-Lausanne|Home]] | | !align="center"|[[Team:EPF-Lausanne|Home]] |
| | !align="center"|[[Team:EPF-Lausanne/Team|The Team]] | | !align="center"|[[Team:EPF-Lausanne/Team|The Team]] |
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| | !align="center"|[[Team:EPF-Lausanne/References|References]] | | !align="center"|[[Team:EPF-Lausanne/References|References]] |
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| | + | </div><div CLASS="epfl09bouchon"></div> |
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