Team:Groningen/Literature

From 2009.igem.org

Revision as of 23:31, 21 October 2009

Literature

Buoyancy related literature:

• Buoyant density: Poole 1977, Bylund 1991, Baldwin 1995
• Gas vesicles: Bowen 1965, Walsby 1979, Walsby 1994, Li 1998, Sivertsen 2008, Holland 2009

Other methods of arsenic purification.

• General information about the subject:Frankenberger 2001,Stephan Hug,Wlckramaslnghe 2004,Dong 2008,EPA 2000,
• Ion exchange and Membranes:Oehmen 2006,
• Nanomaterials:Hristovski 2007,Martinson 2009,Chang 2009,
• Precipitative Processes:Raje 2005,

Our metal related literature by subject:

Alon 2007

Uri Alon (2007). Introduction to systems biology: design principles of biological circuits Chapman & Hall/CRC. ISBN 978-1-58488-642-6

Baldwin 1995

W.W. Baldwin, Richard Myer, Nicole Powell, et al (August 1995). "[http://www.springerlink.com/content/nu1lkduf3w89fmd8 Buoyant density of Escherichia coli is determined solely by the osmolarity of the culture medium]". Archives of Microbiology 164(2): 155-157

Beltramini 1981

M. Beltramini and K. Lerch (1981). "[http://www.ncbi.nlm.nih.gov/pubmed/6453726 Luminescence Properties of Neurospora Copper Metallothionein]". FEBS Letters 127(2): 201-203

Beyer 2004

Andreas Beyer, Jens Hollunder, Heinz-Peter Nasheuer and Thomas Wilhelm (August 2004). "[http://dx.doi.org/10.1074/mcp.M400099-MCP200 Post-transcriptional Expression Regulation in the Yeast Saccharomyces cerevisiae on a Genomic Scale]". Molecular & Cellular Proteomics 3: 1083-1092

Bhutkar, A2005

Bhutkar, A(2005). '[http://www.ncbi.nlm.nih.gov/pubmed/16538811?dopt=Abstract Synthetic Biology: Navigating the Challenges Ahead]".The journal of Biolaw and Business. 2(8):

Blancato 2006

Blancato VS, Magni C, Lolkema JS. (October 2006). "[http://dx.doi.org/doi:10.1016/j.jmb.2009.02.015 Functional characterization and Me ion specificity of a Ca-citrate transporter from Enterococcus faecalis]". FEBS journal 273(22): 5121-5130

Blindauer 2002

Claudia A. Blindauer, Mark D. Harrison, Andrea K. Robinson, et al (2002). "[http://dx.doi.org/10.1046/j.1365-2958.2002.03109.x Multiple bacteria encode metallothioneins and SmtA-like zinc fingers]". Molecular Microbiology 45(5): 1421-1432

Blindauer 2001

Blindauer CA, Harrison MD, et al (2001). "[http://www.ncbi.nlm.nih.gov/pubmed/11493688 A metallothionein containing a zinc finger within a four-metal cluster protects a bacterium from zinc toxicity.]". Proc Natl Acad Sci USA. 98(17): ):9593-9598

Bowen 1965

C.C. Bowen and T.E. Jensen ( March 1965). "[http://dx.doi.org/10.1126/science.147.3664.1460 Blue-Green Algae: Fine Structure of the Gas Vacuoles]". Science 147(3664): 1460 - 1462

Busenlehner 2003

Busenlehner L.S., Pennella M.A. & Giedroc D.P., (June 2003) "[http://dx.doi.org/10.1155/2006/837139 The SmtB/ArsR family of metalloregulatory transcriptional repressors: structural insights into prokaryotic metal resistance]". FEMS Microbiology Reviews, 2003, 27, 131-143.

Brady 1994

Brady D, Rose PD, Duncan JR. (1994). "[http://www.ncbi.nlm.nih.gov/pubmed/18618649 The use of hollow fiber cross-flow microfiltration in bioaccumulation and continuous removal of heavy metals from solution by Saccharomyces cerevisiae.]". Biotechnol Bioeng. 44(11):1362-1366

Bylund 1991

J.E. Bylund, M.A. Haines, K. Walsh, et al (September 1991). "[http://jb.asm.org/cgi/content/abstract/173/17/5396 Buoyant density studies of several mecillinam-resistant and division mutants of Escherichia coli]". Journal of Bacteriology 173(17): 5396-5402

Cadosch 2008

Cadosch D, Meagher J, Gautschi OP, Filgueira L. (December 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/19133293 Uptake and intracellular distribution of various metal ions in human monocyte-derived dendritic cells detected by Newport Green DCF diacetate ester]". Journal Neurosci Methods. 178(1):182-187

Catini 2008

Cantini F., Banci L. & Solioz M., (October 2008) "[http://dx.doi.org/10.1042/BJ20081713 The copper-responsive repressor CopR of Lactococcus lactis is a ‘winged helix’ protein]". Biochem. J., 2009, 417, 493–499.

Carlin 1995

Arthur Carlin, Weiping Shi, Saibal Dey and Barry P. Rosen (February 1995). "[http://www.ncbi.nlm.nih.gov/pubmed/7860609 The ars Operon of Escherichia coli Confers Arsenical and Antimonial Resistance]". Journal of Bacteriology 177(4): 981-986

Chen 1997

Yanxiang Chen and Barry P. Rosen (May 1997). "[http://www.ncbi.nlm.nih.gov/pubmed/9162059 Metalloregulatory Properties of the ArsD Repressor]". The Journal of Biological Chemistry 272(22): 14257-14262

Chen 1997-2

Chen S, Wilson DB. (1997). "[http://www.ncbi.nlm.nih.gov/pubmed/9342882 Genetic engineering of bacteria and their potential for Hg2+ bioremediation] ". Biodegradation 8(2): 97-103

Chen 1998

Chen S, Kim E, Shuler ML, Wilson DB. (1998). "[http://www.ncbi.nlm.nih.gov/pubmed/9758654 Hg2+ removal by genetically engineered Escherichia coli in a hollow fiber bioreactor]". Biotechnol Prog. 14(5):667-671

Chen 2008

Chen P.R. & He C., (March 2008) "[http://dx.doi.org/10.1016/j.cbpa.2007.12.010 Selective recognition of metal ions by metalloregulatory proteins, Current Opinion in Chemical Biology]". 2008, 12, 214–221.

Chang 1998

Chang CC, Liao WF, Huang PC. (1998). "[http://www.ncbi.nlm.nih.gov/pubmed/9579658 Cysteine contributions to metal binding preference for Zn/Cd in the beta-domain of metallothionein]". Protein Eng. 11(1):42-46

Chang 2009

Yoon-Young Chang, Seung-Mok Lee, Jae-Kyu Yang, (August 2009). "[http://dx.doi.org/10.1016/j.colsurfa.2009.06.017 Removal of As(III) and As(V) by natural and synthetic metal oxides]". Colloids and Surfaces A: Physicochemical and Engineering Aspects 346(1-3): 202-207

Chopra, PK, A2006

Chopra, PK, A(2006). "[http://www.ncbi.nlm.nih.gov/pubmed/17274769?dopt=Abstract Engineering life through Synthetic Biology]".In silico Biology. 0038(6):

Cleland, CE, et al.2002

Cleland, CE, et al.(2002). "[http://www.springerlink.com/content/hl14401v6rq7010r/ Defining 'life']".Origins of Life and Evolution of the Biosphere. 4(32):387-393

Deng 2003

Deng X, Li QB, Lu YH, Sun DH, Huang YL, Chen XR. (2003). "[http://www.ncbi.nlm.nih.gov/pubmed/12727263 Bioaccumulation of nickel from aqueous solutions by genetically engineered Escherichia coli.]". Water Res. 37(10):2505-2511

Deng 2007

Deng X, Yi XE, Liu G. (2007). "[http://www.ncbi.nlm.nih.gov/pubmed/16890348 Cadmium removal from aqueous solution by gene-modified Escherichia coli JM109]". Journal Hazard Mater. 139(2):340-344

Deng 2008

Deng X, Hu ZL, Yi XE. (May 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/17920767 Continuous treatment process of mercury removal from aqueous solution by growing recombinant E. coli cells and modeling study]". Journal Hazard Mater. 153(1-2):487-492

Deplazes, A2009

Deplazes, A(2009). "[http://www.ncbi.nlm.nih.gov/pubmed/19415076?dopt=Abstract Piecing together a puzzle An exposition of synthetic biology]".Embo Reports. 5(10):428-432

Dey 1995

Saibal Dey, Barry P. Rosen (1995). "[http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=176602 Dual Mode of Energy Coupling by the Oxyanion Translocating ArsB Protein]". JOURNAL OF BACTERIOLOGY 177(2): 385–389

Dong 2008

Dong, Liangjie (December 2008). "[http://www.freepatentsonline.com/y2008/0311288.html Methods and Compositions for Removal of Arsenic and Heavy Metals From Water]". United States Patent Application 20080311288 Kind Code:A1

EPA 2000

Environmental Protection Agency (December 2000). "[http://www.epa.gov/safewater Technologies and Costs for Removal of Arsenic from Drinking Water]". EPA 815-R-00-028

Ettema 2006

Thijs J. G. Ettema, Arie B. Brinkman et al (2006). "[http://dx.doi.org/10.1099/mic.0.28724-0 Molecular characterization of a conserved archaeal copper resistance (cop) gene cluster and its copper-responsive regulator in Sulfolobus solfataricus P2]". Microbiology 152: 1969-1979

Fowler 1987

Fowler BA. (1987). "[http://www.ncbi.nlm.nih.gov/pubmed/3297654 Intracellular compartmentation of metals in aquatic organisms: roles in mechanisms of cell injury]". Environ Health Perspect. 7(1): 121-128

Fosmire 1990

Fosmire GA. (1990). "[http://www.ncbi.nlm.nih.gov/pubmed/2407097 Zinc toxicity]". American Society for Clinical Nutrition. 5l: 225-227

Frankenberger 2001

William T. Frankenberger Jr. (2001). Environmental Chemistry of Arsenic, Marcel Dekker, New York, NY, 404 pp. ISBN 0-8247-0676-5

Fu, DX, et al.2000

Fu, DX, et al.(2000). "[http://www.ncbi.nlm.nih.gov./pubmed/11039922?dopt=Abstract Structure of a glycerol-conducting channel and the basis for its selectivity]".Science. 5491(290):481-486

Gilchrist 2007

Michael A. Gilchrist (2007). "[http://dx.doi.org/10.1093/molbev/msm169 Combining Models of Protein Translation and Population Genetics to Predict Protein Production Rates from Codon Usage Patterns]". Molecular Biology and Evolution 24(11): 2362-2372

Gold 2008

Gold B, Deng H, et al(2008). "[http://www.ncbi.nlm.nih.gov/pubmed/18724363 Identification of a copper-binding metallothionein in pathogenic mycobacteria]". Nat Chem Biol. 4(10): 609-616

Goudar 1999

Chetan T. Goudara, Jagadeesh R. Sonnadb and Ronald G. Duggleby (January 1999). "[http://dx.doi.org/10.1016/S0167-4838(98)00247-7 Parameter estimation using a direct solution of the integrated Michaelis-Menten equation]". Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology 1429(2): 377-383

Guven 2007

Basak Guven and Alan Howarda (September 2007). "[http://dx.doi.org/doi:10.1016/j.ecolmodel.2007.03.024 Identifying the critical parameters of a cyanobacterial growth and movement model by using generalised sensitivity analysis]". Ecological Modelling 207(1): 11-21

Heller, KB, et al.1980

Heller, KB, et al.(1980). "[http://www.ncbi.nlm.nih.gov/pubmed/6998951?dopt=Abstract Substrate-Specificity and Transport-Properties of the Glycerol Facilitator of Escherichia-Coli]".Journal of Bacteriology. 1(144):274-278

Hirose 2006

Hirose K, Ezaki B, Tong L Nakashima S, et al (August 2005) "[http://dx.doi.org/10.1016/j.toxlet.2005.11.008 Diamide stress induces a metallothionein BmtA through a repressor BxmR and is modulated by Zn-inducible BmtA in the cyanobacterium Oscillatoria brevis]". Toxicology Letters, 2006, 163, 250–256.

Hoefnagel 2002

M.H.N. Hoefnagel, A. van der Burgt, D.E. Martens, et al (March 2002). "[http://dx.doi.org/10.1023/A:1020313409954 Time Dependent Responses of Glycolytic Intermediates in a Detailed Glycolytic Model of Lactococcus Lactis During Glucose Run-Out Experiments]". Molecular Biology Reports 29: 157-161

Holland 2009

Daryl P. Holland, Anthony E. Walsby (January 2009). "[http://dx.doi.org/10.1016/j.mimet.2009.02.005 Digital recordings of gas-vesicle collapse used to measure turgor pressure and cell–water relations of cyanobacterial cells ]". Journal of Microbiological Methods 77: 214-224

Hristovski 2007

Kiril Hristovski, Andrew Baumgardner, Paul Westerhoff, (August 2007). "[http://dx.doi.org/10.1016/j.jhazmat.2007.01.017 Selecting metal oxide nanomaterials for arsenic removal in fixed bed columns: From nanopowders to aggregated nanoparticle media]". Journal of Hazardous Materials 147(1-2): 265-274

Kao 2008

Kao WC, Huang CC, Chang JS (October 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/18313216 Biosorption of nickel, chromium and zinc by MerP-expressing recombinant Escherichia coli.]". J Hazard Mater. 158(1): 100-106

Kelle, A2009

Kelle, A(2009). "[http://www.ncbi.nlm.nih.gov/pubmed/19636299?dopt=Abstract Synthetic biology and biosecurity From low levels of awareness to a comprehensive strategy]".Embo Reports. 10):S23-S27

Kelly 2009

Jason R. Kelly, Adam J. Rubin, Joseph H. Davis, et al (March 2009). "[http://dx.doi.org/10.1186/1754-1611-3-4 Measuring the activity of BioBrick promoters using an in vivo reference standard]". Journal of Biological Engineering 3: 4

Khunajakr 1999

Nongpanga Khunajakr, Chun-Qiang Liu et al (March 1999). "[http://dx.doi.org/10.1016/S0378-1119(98)00395-3 A plasmid-encoded two-component regulatory system involved in copper-inducible transcription in Lactococcus lactis]". Gene229(1-1): 229-235

Klaassen 1994

Klaassen, Curtis D., Supratim Choudhuri, James M. McKim, Jr., Lois D. Lehman-McKeeman, and William C. Kershaw (1994). [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1567434/ "In Vitro and In Vivo Studies on the Degradation of Metallothionein"]. Environ. Health Perspect 102(3): 141-146.

Kloosterman 2008

Tomas G. Kloosterman, Robert M. Witwicki et al (2008). "[http://dx.doi.org/10.1128/JB.00307-08 Opposite Effects of Mn2+ and Zn2+ on PsaR-Mediated Expression of the Virulence Genes pcpA, prtA, and psaBCA of Streptococcus pneumonia]". J Bacterio190(15): 5382–5393

Kostal 2004

Jan Kostal, Rosanna Yang, Cindy H. Wu, et al (August 2004). "[http://dx.doi.org/10.1128/AEM.70.8.4582-4587.2004 Enhanced Arsenic Accumulation in Engineered Bacterial Cells Expressing ArsR]". Applied and Environmental Microbiology 70(8): 4582–4587

Kuroda 1999

Jan Kostal, Rosanna Yang, Cindy H. Wu, et al (1999). "[http://www.ncbi.nlm.nih.gov/pubmed/10229265?ordinalpos=2&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Chromosome-determined zinc-responsible operon czr in Staphylococcus aureus strain 912]". Microbiol Immunol. 43(2): 115-25

Lewinson 2009

Lewinson O, Lee AT, Rees DC. (2009). "[http://www.ncbi.nlm.nih.gov/pubmed/19264958 A P-type ATPase importer that discriminates between essential and toxic transition metals]". PNAS 106(12): 4677-4682

Li 1998

Ning Li and Maura C. Cannon (May 1998). "Gas Vesicle Genes Identified in Bacillus megaterium and Functional Expression in Escherichia coli". Journal of Bacteriology 180(9): 2450–2458

Lin 2007-1

Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (April 2007). "[http://dx.doi.org/10.1074/jbc.M700886200 ArsD Residues Cys12, Cys13, and Cys18 Form an As(III)-binding Site Required for Arsenic Metallochaperone Activity]". The Journal of Biological Chemistry 282(23): 16783–16791

Lin 2007-2

Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (December 2007). "[http://dx.doi.org/10.1007/s10863-007-9113-y ArsD: an As(III) metallochaperone for the ArsAB As(III)-translocating ATPase]". Journal of Bioenergetics and Biomembranes 39: 453-458

Liu 2004

Tong Liu, Susumu Nakashima et al (April 2004) "[http://dx.doi.org/10.1074/jbc.M310560200 A Novel Cyanobacterial SmtB/ArsR Family Repressor Regulates the Expression of a CPx-ATPase and a Metallothionein in Response to Both Cu(I)/Ag(I) and Zn(II)/Cd(II)]". The Journal of Biological Chemistry, 2004, Vol. 279, No. 17, 17810–17818.

Liu 2006

Tong Liu Arati Ramesh et al(December 2006). "[http://dx.doi.org/10.1038/nchembio844 CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator]". Nature Chemical Biology 3: 60-68

Liu 2008

Tong Liu, Xiaohua Chen, Zhen Ma, et al (September 2008) "[http://dx.doi.org/10.1021/bi801313y A CuI-sensing ArsR family Metal Sensor Protein with a Relaxed Metal Selectivity Profile]". Biochemistry, 2008, 47(40), 10564–10575.

Lundstrom (2006)

Lundstrom, K. (2006). “[http://www.springerlink.com/content/23783l53l616238t/ Structural genomics for membrane proteins]” Cell. Mol. Life Sci. 63: 2597–2607.

Martinson 2009

Carol A. Martinson, K.J. Reddy, (August 2009). "[http://dx.doi.org/10.1016/j.jcis.2009.04.075 Adsorption of arsenic(III) and arsenic(V) by cupric oxide nanoparticles]". Journal of Colloid and Interface Science 336(2): 406-411

Meng, YL, et al.2004

Meng, YL, et al.(2004). ” [http://dx.doi.org/10.1074/jbc.M400037200 As(III) and Sb(III) uptake by G1pF and efflux by ArsB in Escherichia coli]".Journal of Biological Chemistry. 18(279):18334-18341

Merrifield 2004

M. E. Merrifield, T. Ngu, M. J. Stillman et al (September 2004). "[http://www.ncbi.nlm.nih.gov/pubmed/15464992 Arsenic binding to Fucus vesiculosus metallothionein.]". Biochemical and Biophysical Research Communications 324 : 127–132

Mills 1994

Scott D. Mills Chun-Keun Lim and Donald A. Cooksey (1994). "[http://dx.doi.org/10.1007/BF00286685 Purification and characterization of CopR, a transcriptional activator protein that binds to a conserved domain (cop box) in copper- inducible promoters of Pseudomonas syringae]". Molecular and General Genetics MGG 244(4): 1432-1874

Mindlin, SZ, et al.2002

Mindlin, SZ, et al.(2002). "[http://dx.doi.org/10.1023/A:1015353402657 Horizontal transfer of mercury resistance genes in environmental bacterial populations]".Molecular Biology. 2(36):160-170

Moore 2005

Charles M. Moore, Ahmed Gaballa et al (May 2005). "[http://dx.doi.org/10.1111/j.1365-2958.2005.04642.x Genetic and physiological responses of Bacillus subtilis to metal ion stress]". Molecular Microbiology57(1): 27-40

Morris 1999

C.A. Morris, B. Nicolaus, V. Sampson et al (March 1999). "[http://www.ncbi.nlm.nih.gov/pubmed/10024535 Identification and characterization of a recombinant metallothionein protein from a marine alga, Fucus vesiculosus]". The Biochemical journal 338(2): 553-560

Nawapan 2009

Sirikan Nawapan, Nisanart Charoenlap et al (August 2009). "[http://dx.doi.org/10.1046/10.1128/JB.00384-09 Functional and Expression Analyses of the cop Operon, Required for Copper Resistance in Agrobacterium tumefaciens]". American Society for Microbiology 191(16): 5159-5168

Neves 1999

Ana Rute Neves, Ana Ramos, Marta C. Nunes, et al (1999). "[http://dx.doi.org/10.1002/(SICI)1097-0290(19990720)64%3A2%3C200%3A%3AAID-BIT9%3E3.0.CO%3B2-K In vivo nuclear magnetic resonance studies of glycolytic kinetics in Lactococcus lactis]". Biotechnology and Bioengineering 64: 200-212

Ngu 2006

Thanh T. Ngu, M. Stillman (April 2006). "[http://dx.doi.org/10.1021/ja062914c Arsenic Binding to Human Metallothionein]". J. Am. Chem. Soc 128 (38): 12473–12483

Ngu 2009

Thanh T. Ngu, J. A. Lee et al. (April 2009). "[http://dx.doi.org/10.1021/bi9007462 Arsenic Metalation of Seaweed Fucus vesiculosus Metallothionein: The importance of the Interdomain Linker in Metallothionein]". Biochemistry 48: 8806–8816

Nicholls, H2008

Nicholls, H(2008). "[http://dx.doi.org/10.1016/S0140-6736(08)61881-4 Synthetic biology]".Lancet. S45-S49

Nouri, A, et al.2009

Nouri, A, et al.(2009). "[http://www.ncbi.nlm.nih.gov/pubmed/19270668?dopt=Abstract Proliferation-resistant biotechnology: an approach to improve biological security]".Nature Biotechnology. 3(27):234-236

Oehmen 2006

Adrian Oehmen, Rui Viegas, Svetlozar Velizarov, et al (November 2006). "[http://dx.doi.org/10.1016/j.desal.2006.03.091 Removal of heavy metals from drinking water supplies through the ion exchange membrane bioreactor]". Desalination 199(1-3): 405-407

Outten 1999

Caryn E. Outten, F. Wayne Outten and Thomas V. O’Halloran (November 1999). "[http://www.jbc.org/content/274/53/37517.long DNA distortion mechanism for transcriptional activation by ZntR, a Zn(II)-responsive MerR homologue in Escherichia coli.]". The Journal of Biological Chemistry 274(53): 37517-24

Outten 2000

F. Wayne Outten, Caryn E. Outten, Jeremy Hale and Thomas V. O’Halloran (October 2000). "[http://dx.doi.org/10.1074/jbc.M006508200 Transcriptional Activation of an Escherichia coli Copper Efflux Regulon by the Chromosomal MerR Homologue, CueR]". The Journal of Biological Chemistry 275(40): 31024-31029

Pennella 2005

Pennella M.A. & Giedroc D.P., (August 2005) "[http://dx.doi.org/10.1007/s10534-005-3716-8 Structural determinants of metal selectivity in prokaryotic metal-responsive transcriptional regulator]". BioMetals, 2005, 18, 413–428.

Petersen 2000

Petersen C, Møller LB. (2000). "[http://www.ncbi.nlm.nih.gov/pubmed/11167016?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Control of copper homeostasis in Escherichia coli by a P-type ATPase, CopA, and a MerR-like transcriptional activator, CopR.]". Journal of General Microbiology 261(2): 289-98

Poole 1977

R.K. Poole (1977). "[http://mic.sgmjournals.org/cgi/content/abstract/98/1/177 Fluctuations in Buoyant Density during the Cell Cycle of Escherichia coli K12]". Journal of General Microbiology 98: 177-186

Porquet, A, et al.2007

Porquet, A, et al.(2007). “[http://www.ncbi.nlm.nih.gov./pubmed/17713961?dopt=Abstract Structural evidence of the similarity of Sb(OH)(3) and As(OH)(3) with glycerol: Implications for their uptake]".Chemical Research in Toxicology. 9(20):1269-1276

Raje 2005

N. Raje,* K. K. Swain (April 2005). "[http://dx.doi.org/10.1023/A:1015812517214 Purification of arsenic contaminated ground water using hydrated manganese dioxide]". Journal of Radioanalytical and Nuclear Chemistry 253(1): 77-80

Rawlings 1994

RAWLINGS, D E. and KUSANO, T (1994). “[http://mmbr.asm.org/cgi/reprint/58/1/39?view=long&pmid=8177170 Molecular Genetics of Thiobacillus ferrooxidans]”. ‘’MICROBIOLOGICAL REVIEWS’’, ‘’’58 (1): 39-55’’’

Rensing 2000

Rensing C, Fan B, Sharma R, Mitra B, Rosen BP (January 2005). "[http://www.pnas.org/content/97/2/652.long CopA: An Escherichia coli Cu(I)-translocating P-type ATPase]". PNAS 18;97(2):652-6

Rensing 2003

Rensing C, Grass G. (June 2003). "[http://www.ncbi.nlm.nih.gov/pubmed/12829268?ordinalpos=10&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Escherichia coli mechanisms of copper homeostasis in a changing environment.]". FEMS Microbiol Rev. 27(2-3): 197-213

Rensing 2005

Christopher Rensing (June 2005). "[http://dx.doi.org/10.1128/JB.187.12.3909-3912.2005 Form and Function in Metal-Dependent Transcriptional Regulation: Dawn of the Enlightenment]". Journal of Bacteriology 187(12): 3909–3912

Robinson 2001

Nigel J. Robinson, Simon K. Whitehall and Jennifer S. Cavet (2001). "[http://www.ncbi.nlm.nih.gov/pubmed/11407113 Microbial Metallothioneins]". Advances in Microbial Physiology 44: 183-213

Rosen 1996

Barry P. Rosen (August 1996). "[http://dx.doi.org/10.1007/s007750050053 Bacterial resistance to heavy metals and metalloids]". Journal of Biological Inorganic Chemistry 1(4): 273-277

Rosen, BR, et al.2009

Rosen, BR, et al.(2009). “[http://dx.doi.org/10.1007/s007750050053 Transport pathways for arsenic and selenium: A minireview]".Environment International. 3(35):512-515

Samuel, GN, et al.2009

Samuel, GN, et al.(2009). "[http://www.ncbi.nlm.nih.gov/pubmed/19079130?dopt=Abstract Managing the unimaginable Regulatory responses to the challenges posed by synthetic biology and synthetic genomics]".Embo Reports. 1(10):7-11

Schmidt, M 2008

Schmidt, M (2008). "[http://dx.doi.org/10.1007/s11693-008-9018-z Diffusion of synthetic biology: a challenge to biosafety]", Syst Synth Biol.

Schwartz 2008

Russel Schwartz (2008). Biological modeling and simulation: a survey of practical models, algorithms, and numerical methods MIT Press. ISBN 978-0-262-19584-3

Serrano, L2007

Serrano, L(2007). "[http://www.ncbi.nlm.nih.gov/pubmed/18091727?dopt=Abstract Synthetic biology: promises and challenges]".Molecular Systems Biology. 3):

Shi 1992

Jianguo Shi, William P. Lindsay, James W. Huckle (June 1992). "[http://dx.doi.org/10.1016/0014-5793(92)80509-F Cyanobacterial metallothionein gene expressed in Escherichia coli: Metal-binding properties of the expressed protein]". FEBS Letters 303(2-3): 159-163

ZntR is an autoregulatory protein and negatively regulates the chromosomal zinc resistance operon znt of Staphylococcus aureus.

Singh 1999

Singh VK, Xiong A, Usgaard TR, Chakrabarti S, Deora R, Misra TK, Jayaswal RK. (July 1999). "[http://www.ncbi.nlm.nih.gov/pubmed/10411736?ordinalpos=10&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum ZntR is an autoregulatory protein and negatively regulates the chromosomal zinc resistance operon znt of Staphylococcus aureus.]". Molecular Microbiology 33(1): 200-7

Singh 2008

Shailendra Singh, Ashok Mulchandani, Wilfred Chen (February 2008). "[http://dx.doi.org/10.1128/AEM.02871-07 Highly Selective and Rapid Arsenic Removal by Metabolically Engineered Escherichia coli Cells Expressing Fucus vesiculosus Metallothionein]". MICROBIOLOGY 74(9): 2924–2927

Sivertsen 2008

Astrid C. Sivertsen, Marvin J. Bayro, et al ( april 2008). "[http://dx.doi.org/doi:10.1016/j.jmb.2009.02.015 Solid-State NMR Evidence for Inequivalent GvpA Subunits in Gas Vesicles]". Journal of Molecular Biology 387(4): 1032-1039

Stephan Hug

Stephan Hug. "[http://www.eawag.ch/publications/eawagnews/www_en49/en49e_ihv_web.html Arsenic Contamination of Ground Water: Disastrous Consequences in Bangladesh]". EAWAG news 49(e): 18-20

Stephenson, JR, et al.1996

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Miscellaneous:

• [http://ginkgobioworks.com/cgi/primer.cgi Primer design Bioworks]
• [http://openwetware.org/wiki/The_BioBricks_Foundation:Standards/Technical/Measurement Promotor measurement]
• [http://openwetware.org/wiki/Main_Page OpenWetWare]
• [http://www.hgsc.bcm.tmc.edu/projects/microbial/microbial-detail.xsp?project_id=105 E. coli DH10B genome] (with BLAST)