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Minnesota/29 June 2009
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I switched over today to looking at making the "leakiness" equations for the TTN model. Initially I would represent the leakiness with two equations:<br> | I switched over today to looking at making the "leakiness" equations for the TTN model. Initially I would represent the leakiness with two equations:<br> | ||
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{| class="wikitable" style="text-align:center" border = "1" | {| class="wikitable" style="text-align:center" border = "1" | ||
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|47||RNAp + lacP + tetO1 + tetO2:tetR2 -> RNAp:lacP||1E+07 | |47||RNAp + lacP + tetO1 + tetO2:tetR2 -> RNAp:lacP||1E+07 | ||
| - | |}<br> | + | |}</center><br> |
The aTc complexes don't have to be represented since the leakiness is for aTc=0 in particular. Also a third leakiness equation could be made, one where both tetO1:tetR2 and tetO2:tetR2 exist, but I chose to add this later if necessary. I expect the results tomorrow.<br> | The aTc complexes don't have to be represented since the leakiness is for aTc=0 in particular. Also a third leakiness equation could be made, one where both tetO1:tetR2 and tetO2:tetR2 exist, but I chose to add this later if necessary. I expect the results tomorrow.<br> | ||
Revision as of 22:17, 30 July 2009
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Patrick
I switched over today to looking at making the "leakiness" equations for the TTN model. Initially I would represent the leakiness with two equations:
| Rxn # | Reaction | Forward Kinetic Constant |
|---|---|---|
| 46 | RNAp + lacP + tetO1:tetR2 + tetO2 -> RNAp:lacP | 1E+07 |
| 47 | RNAp + lacP + tetO1 + tetO2:tetR2 -> RNAp:lacP | 1E+07 |
The aTc complexes don't have to be represented since the leakiness is for aTc=0 in particular. Also a third leakiness equation could be made, one where both tetO1:tetR2 and tetO2:tetR2 exist, but I chose to add this later if necessary. I expect the results tomorrow.
Ben
