Team:Newcastle/SBML

From 2009.igem.org

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The following are models which we have developed using SBML:
The following are models which we have developed using SBML:
* [[Team:Newcastle/SporulationTuning#Modelling|KinA Model]]
* [[Team:Newcastle/SporulationTuning#Modelling|KinA Model]]
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* [[Team:Newcastle/Modelling/Degradation Degradation]]
== External links ==
== External links ==

Revision as of 08:04, 21 October 2009


Contents

SBML

SBML is a language which stores and exchanges computer-based mathematical models. It is an open standard based on the XML markup language. For writing the models in SBML we used the COPASI program.

JSim

To bridge the gap between agent based models (Java) and cellular models (SBML), the Newcastle team are using a software product called JSim, developed by the University of Washington.

Models developed

The following are models which we have developed using SBML:

External links

  • [http://sbml.org SBML]
  • [http://www.copasi.org/tiki-index.php COPASI]



News

Events

Social Net

  • Newcastle iGEM Twitter
  • [http://www.facebook.com/home.php#/group.php?gid=131709337641 Newcastle on Facebook]
  • [http://www.youtube.com/user/newcastle2009igem Newcastle Youtube Channel]