Team:Waterloo/Notebook/strainlist
From 2009.igem.org
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==Strain list== | ==Strain list== | ||
{| width="40%" border="1" cellpadding="2" | {| width="40%" border="1" cellpadding="2" | ||
- | ! | + | !Location!!Strain #!!Name!!Chassis/Strain!!Plasmid Backbone!!Registry Part!!Antibiotic Resistance!!Description!!Reference Date |
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |1 | ||
+ | |rTT + PocI | ||
+ | |DH5α | ||
+ | |pMA (GeneArt) | ||
+ | |[http://partsregistry.org/Part:BBa_K093003 BBa_K093003] | ||
+ | |Amp100 | ||
+ | |Synthesized. Contains BioBrick prefix and suffix. Reverse orientation transcriptional terminator R0015 with λ Pr promotor. | ||
+ | |2008:09:09 | ||
|- | |- | ||
- | | | + | |iGEM strain box 1 |
+ | |2 | ||
+ | |rPlacTT | ||
+ | |DH5α | ||
+ | |pMA (GeneArt) | ||
+ | |[http://partsregistry.org/Part:BBa_K093004 BBa_K093004] | ||
+ | |Amp100 | ||
+ | |Synthesized. Contains BioBrick prefix and suffix. Reverse [http://partsregistry.org/Part:BBa_R0011 BBa_R0011] and transcriptional terminator [http://partsregistry.org/Part:BBa_B0015 BBa_B0015]. | ||
+ | |2008:09:09 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |3 | ||
+ | |PmeI | ||
+ | |DH5α | ||
+ | |pMA (GeneArt) | ||
+ | |[http://partsregistry.org/Part:BBa_K093002 BBa_K093002] | ||
+ | |Amp100 | ||
+ | |Synthesized ORF. Contains BioBrick prefix and suffix. | ||
+ | |2008:09:09 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |4 | ||
+ | |rfp'-14 | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_K093005 BBa_K093005] | ||
+ | |Amp100 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) colony 14. | ||
+ | |2008:09:09 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |5 | ||
+ | |rfp''-2 | ||
+ | |DH5α | ||
+ | |pSB1AK3 | ||
+ | | | ||
+ | |Amp100, Kan25 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) colony 2. Might need testing | ||
+ | |2008:09:09 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |6 | ||
+ | |Pconst-rfp''-1 | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_K093012 BBa_K093012] | ||
+ | |Amp100 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) under a constitutive promoter ([http://partsregistry.org/Part:BBa_J23118 BBa_J23118]). Might need testing. | ||
+ | |2008:09:09 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |7 | ||
+ | |pRecA-3 | ||
+ | |DH5α | ||
+ | |psb2k3 | ||
+ | |[http://partsregistry.org/Part:BBa_K093000 BBa_K093000] | ||
+ | |Kan25 | ||
+ | |Engineered RecA promoter with lexA consensus sequence. | ||
+ | |2008:10:17 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |8 | ||
+ | |Pconst-rfp' 1 | ||
+ | |DH5α | ||
+ | |psb1a2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) under a constitutive promoter ([http://partsregistry.org/Part:BBa_J23118 BBa_J23118]) | ||
+ | |2008:10:17 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |9 | ||
+ | |c0051' | ||
+ | |DH5α | ||
+ | |psb1a2 | ||
+ | |[http://partsregistry.org/Part:BBa_K093006 BBa_K093006] | ||
+ | |Amp100 | ||
+ | |[http://partsregistry.org/Part:BBa_C0051 BBa_C0051] Repressor for Lambda Pr promoter with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]). Never got sequencing results of prefix. Rest was good | ||
+ | |2008:10:17 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |10 | ||
+ | |PmeI - 14 | ||
+ | |DH5α | ||
+ | |psb2k3 | ||
+ | |[http://partsregistry.org/Part:BBa_K093002 BBa_K093002] | ||
+ | |Kan25 | ||
+ | |PmeI cloned into BioBrick vector | ||
+ | |2008:10:17 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |11 | ||
+ | |PrecA RFP' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | |[http://partsregistry.org/Part:BBa_K093009 BBa_K093009] | ||
+ | |Kan25 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) under the control of [http://partsregistry.org/Part:BBa_K093000 BBa_K093000] promoter | ||
+ | |2008:10:17 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |12 | ||
+ | |PmeI' | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_K093013 BBa_K093013] | ||
+ | |Amp100 | ||
+ | |PmeI ([http://partsregistry.org/Part:BBa_K093002 BBa_K093002]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) | ||
+ | |2008:11:04 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |13 | ||
+ | |Pr RFP' | ||
+ | |DH5α | ||
+ | |psb1a2 | ||
+ | |[http://partsregistry.org/Part:BBa_K093010 BBa_K093010] | ||
+ | |Amp100 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) under Lamda Pr promoter (R0051) | ||
+ | |2008:11:04 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |14 | ||
+ | |T7 gene 6 | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_K093001 BBa_K093001] | ||
+ | |Amp100 | ||
+ | |good one, correct stop codon taataa | ||
+ | |2009:02:13 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |15 | ||
+ | |PkNG101 | ||
+ | |DH5α λ pir | ||
+ | | | ||
+ | | | ||
+ | |Strep100 | ||
+ | | Only replicates in λ pir lysogen (r6k origin of replication) http://bccm.belspo.be/db/lmbp_plasmid_details.php?NM=pKNG101 | ||
+ | |2009:02:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |16 | ||
+ | |H1-4 pJET | ||
+ | |DH5α | ||
+ | |pJET | ||
+ | | | ||
+ | |Amp100 | ||
+ | |''E. coli'' melA genomic DNA for homologous recombination (“left sequence”/H1) and attP site downstream | ||
+ | |2009:03:18 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |17 | ||
+ | |CI'' pJET | ||
+ | |DH5α | ||
+ | |pJET | ||
+ | | | ||
+ | |Amp100 | ||
+ | |CI repressor for lamda Pr promoter. [http://partsregistry.org/Part:BBa_C0051 BBa_C0051] with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) in pJET (made by crossover PCR) | ||
+ | |2009:03:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |18 | ||
+ | |pFB9002 | ||
+ | |DH5α lamda pir | ||
+ | |pfb9001 | ||
+ | | | ||
+ | |Strep 100 | ||
+ | |''E. coli'' melA genomic DNA for homologous recombination (“left sequence”/H1) and attP site downstream | ||
+ | |2009:03:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |19 | ||
+ | |pJET H2 | ||
+ | |DH5α | ||
+ | |pJET | ||
+ | | | ||
+ | |Amp100 | ||
+ | |''E. coli'' melA genomic DNA for homologous recombination (“right sequence”/H2) and attP site upstream | ||
+ | |2009:04:09 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |20 | ||
+ | |Pfb9003 | ||
+ | |DH5α lamda pir | ||
+ | |pfb9001 | ||
+ | | | ||
+ | |Strep100 | ||
+ | |''E. coli'' melA genomic DNA for homologous recombination (“right sequence”/H2) and attP site upstream | ||
+ | |2009:04:23 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |21 | ||
+ | |pfb9004 | ||
+ | |DH5α lamda pir | ||
+ | |pfb9001 | ||
+ | | | ||
+ | |Strep100 | ||
+ | |Contains two attP sites flanked by ''E. coli'' melA genomic DNA for homologous recombination (H1 and H2) | ||
+ | |2009:04:23 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |22 | ||
+ | |pJET rfp-1 | ||
+ | |DH5α | ||
+ | |pJET | ||
+ | | | ||
+ | |Amp100 | ||
+ | |insert: Pconst ([http://partsregistry.org/Part:BBa_J23118 BBa_J23118]) rfp ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) EcoRV fragment for propagating pJET | ||
+ | |2009:04:24 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |79 | ||
+ | |pJET rfp-2 | ||
+ | |DH5α | ||
+ | |pJET | ||
+ | | | ||
+ | |Amp100 | ||
+ | |insert: Pconst rfp EcoRV fragment | ||
+ | |2009:04:24 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |81 | ||
+ | |pJET rfp-3 | ||
+ | |DH5α | ||
+ | |pJET | ||
+ | | | ||
+ | |Amp100 | ||
+ | |insert: Pconst rfp EcoRV fragment | ||
+ | |2009:04:24 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |23 | ||
+ | |RBS | ||
+ | |DH5α | ||
+ | |pSB1A2? | ||
+ | |B0034 | ||
+ | |Amp100 | ||
+ | |Ribosome binding site (Elowitz) | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |24 | ||
+ | |Pconst55% | ||
+ | |DH5α | ||
+ | |[http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | ||
+ | |[http://partsregistry.org/Part:BBa_J23118 BBa_J23118] | ||
+ | |Amp100 | ||
+ | |Constitutive promoter. Expression level is 55% in comparison with the highest expression levels from this Pconst family (ex. wildtype promoter) | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |25 | ||
+ | |TT | ||
+ | |DH5α | ||
+ | |pSB1AK3 | ||
+ | |[http://partsregistry.org/Part:BBa_B0015 BBa_B0015] | ||
+ | |Amp100, Kan25 | ||
+ | |Default double transcriptional terminator | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |26 | ||
+ | |rfp | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | |E1010 | ||
+ | |Kan25 | ||
+ | |Red fluorescent protein (shows up pink even without appropriate wavelength of light and filter) | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |27 | ||
+ | |Pseudomonas mendocina | ||
+ | |kr 1 | ||
+ | | | ||
+ | | | ||
+ | |? | ||
+ | |Wrong strain for cloning PmeI (received from Paul Hatzinger at Shaw Environmental NJ). Degrades N-nitrodimethylamine (NDMA). Appl Environ Microbiol. 2006 Oct;72(10):6693-8. Epub 2006 Sep 1 | ||
+ | |2008:08:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |28 | ||
+ | |Plac | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_R0010 BBa_R0010] | ||
+ | |Amp100 | ||
+ | |Wildtype LacI repressable promoter | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |29 | ||
+ | |PtetR | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_R0040 BBa_R0040] | ||
+ | |Amp100 | ||
+ | |Promoter that is repressed by tetR and derepressed by tetracyclin. | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |30 | ||
+ | |CI | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_C0051 BBa_C0051] | ||
+ | |Amp100 | ||
+ | |CI repressor for λ Pr promoter | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |31 | ||
+ | |rTT | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |B0025 | ||
+ | |Amp100 | ||
+ | |Reverse transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | ||
+ | |2008:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |32 | ||
+ | |Taq | ||
+ | |DH5α | ||
+ | | | ||
+ | | | ||
+ | |Amp100 | ||
+ | |Taq strain from Moffatt lab for purifying taq | ||
+ | |2008:08:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |33 | ||
+ | |Pconst+ | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_J23119 BBa_J23119] | ||
+ | |Amp100 | ||
+ | |Wildtype promoter─strongest of this promoter family ([http://partsregistry.org/Part:BBa_J23100 BBa_J23100]-[http://partsregistry.org/Part:BBa_J23119 BBa_J23119]) | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |34 | ||
+ | |LacI | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | |[http://partsregistry.org/Part:BBa_C0012 BBa_C0012] | ||
+ | |Amp100 | ||
+ | |LacI repressor for Plac Promoter ([http://partsregistry.org/Part:BBa_R0010 BBa_R0010]) with LVA degredation tag | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |35 | ||
+ | |Pconst4% | ||
+ | |DH5α | ||
+ | |[http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | ||
+ | |[http://partsregistry.org/Part:BBa_J23109 BBa_J23109] | ||
+ | |Amp100 | ||
+ | |Constitutive promoter. Expression level is 4% in comparison with the highest expression levels from this Pconst family (ex. wildtype promoter) | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |36 | ||
+ | |TTbi | ||
+ | |DH5α | ||
+ | |pSB1AK3 | ||
+ | |[http://partsregistry.org/Part:BBa_B0014 BBa_B0014] | ||
+ | |Amp100,Kan25 | ||
+ | |Double terminator─not as strong as [http://partsregistry.org/Part:BBa_B0015 BBa_B0015] but more even efficiency for forward and reverse use. | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |37 | ||
+ | |Pconst100% | ||
+ | |DH5α | ||
+ | |[http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | ||
+ | |[http://partsregistry.org/Part:BBa_J23100 BBa_J23100] | ||
+ | |Amp100 | ||
+ | |Constitutive promoter. Expression level is 100%─the highest expression level for this Pconst family (i.e., wildtype promoter) | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |38 | ||
+ | |PlacCI'' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | |cI repressor ([http://partsregistry.org/Part:BBa_C0051 BBa_C0051]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) under the promoter Plac ([http://partsregistry.org/Part:BBa_R0011 BBa_R0011]). | ||
+ | |2009:04:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |39 | ||
+ | |pTC300 | ||
+ | |DH5α | ||
+ | |pUC19 | ||
+ | | | ||
+ | |Cm10, Kan25 | ||
+ | |Strain containing Kanamycin resistance gene, and SacB negative selection gene flanked together by BamHI sites | ||
+ | |2009:05:30 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |40 | ||
+ | |DB 3.1 | ||
+ | |DB 3.1 | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | |CCDB resistant strain, contains mutation in GyrA | ||
+ | |2009:05:30 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |41 | ||
+ | |DH5α | ||
+ | |DH5 alpha | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | |For making competent cells. Default strain for | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |42 | ||
+ | |pFB9006 | ||
+ | |DH5α λ pir | ||
+ | |pFB9001 | ||
+ | | | ||
+ | |Strep100/Kan20 | ||
+ | |pFB9005+KanSac. pFB9001 containing H2 homologous region to ''E. coli'' melA gene. Does not contain H1 region. | ||
+ | |2009:06:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |43 | ||
+ | |pSB1A3 | ||
+ | |DH5α | ||
+ | |pSB1A3 | ||
+ | | | ||
+ | |Amp 100 | ||
+ | |BioBrick vector from 2009 registry. | ||
+ | |2009:06:16 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |44 | ||
+ | |luxI'' | ||
+ | |DH5α | ||
+ | |pSB1AK3 | ||
+ | | | ||
+ | |Amp100, Kan 25?? | ||
+ | |luxI ([http://partsregistry.org/Part:BBa_C0061 BBa_C0061]) +RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |45 | ||
+ | |PlaclasR'' | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |lasR (C0079) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) under the control of a lac promoter (unsure which promoter - would need testing/sequencing) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |46 | ||
+ | |Plux rfp' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) under Plux promoter | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |47 | ||
+ | |Plas rfp' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) under Plas promoter ([http://partsregistry.org/Part:BBa_R0079 BBa_R0079]) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |48 | ||
+ | |Ptet rfp' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) under Ptet promoter ([http://partsregistry.org/Part:BBa_R0040 BBa_R0040]) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |49 | ||
+ | |PompR rfp' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | |RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) under PompR promoter | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |50 | ||
+ | |tetR'' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | |tetR repressor ([http://partsregistry.org/Part:BBa_C0040 BBa_C0040]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |51 | ||
+ | |??? | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | | | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |52 | ||
+ | |lasI'' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | |lasI ([http://partsregistry.org/Part:BBa_C0078 BBa_C0078]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |53 | ||
+ | |tetR'' | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | |Kan25 | ||
+ | |tetR repressor ([http://partsregistry.org/Part:BBa_C0040 BBa_C0040]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |54 | ||
+ | |tetR' | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |tetR repressor ([http://partsregistry.org/Part:BBa_C0040 BBa_C0040]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |55 | ||
+ | |lasR'' | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |lasR ([http://partsregistry.org/Part:BBa_C0079 BBa_C0079]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | ||
+ | |2007:xx:xx | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |56 | ||
+ | |Plac IA7K | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |???? | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |57 | ||
+ | |pSB1A2 attB TG | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |Was previously Pr RFP', RFP was cut out and attB TG was inserted. Flanked by EcoRI and PstI sites. | ||
+ | |2009:07:06 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |58 | ||
+ | |pSB1A2 attB TT | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |Same as Strain #57, except the inserted fragment was attB TT instead. This is the wild-type attB. | ||
+ | |2009:07:06 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |59 | ||
+ | |pSB1A2 attB CT | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |Same as Strain #57, except the inserted fragment was attB CT instead. | ||
+ | |2009:07:06 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |60 | ||
+ | |rPlacTT + PlacCI | ||
+ | |DH5α | ||
+ | |pSB2K3 | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | |2009:06:15 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |61 | ||
+ | |2008 Construct w/o Promoter | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |RBS + Pmel + rPlacTT + PlacCI. 2008 project. | ||
+ | |2009:07:10 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |62 | ||
+ | |2008 Constant | ||
+ | |DH5α | ||
+ | | | ||
+ | | | ||
+ | |Amp100 | ||
+ | | | ||
+ | |2009:07:15 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |63 | ||
+ | |pSB3C5 | ||
+ | |DB3.1 | ||
+ | |pSB3C5 | ||
+ | | | ||
+ | |Cm25 | ||
+ | |Low copy # plasmid, no promoter, no RBS, "CCDD" (BBa 15001/15002)? | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |64 | ||
+ | |BBa | ||
+ | | | ||
+ | |pSB3C5 | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |65 | ||
+ | |pKNG101 | ||
+ | |DH5α | ||
+ | |pKNG101 | ||
+ | | | ||
+ | |Strep100 | ||
+ | |Plasmid backbone for the pFB9xxx series. | ||
+ | |2009:08:07 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |66 | ||
+ | |DH5α λ pir | ||
+ | |DH5 alpha lambda pir | ||
+ | |None | ||
+ | | | ||
+ | |None | ||
+ | |DH5α λ pir stock for making competent cells. | ||
+ | |2009:07:24 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |67 | ||
+ | |pFB9007 | ||
+ | |DH5α λ pir | ||
+ | |pFB9001 | ||
+ | | | ||
+ | |Strep100 | ||
+ | |Contains H2 region and an attP site. Same as pFB9004 except w/o the truncated SacB gene on the plasmid backbone. | ||
+ | |2009:08:05 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |68 | ||
+ | |pFB9008 | ||
+ | |DH5α λ pir | ||
+ | |pFB9007 | ||
+ | | | ||
+ | |Strep100 | ||
+ | |Same as pFB9007, but it has RFP cloned in upstream of the attP site and the H2 region. | ||
+ | |2009:08:05 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |69 | ||
+ | |pFB9009 #2 | ||
+ | |DH5α λ pir | ||
+ | |pFB9008+H1 | ||
+ | | | ||
+ | |Strep100/Kan20 | ||
+ | |Same as pFB9008+H2, but it has Kanr and sacB genes cloned in between the H1&H2 regions, directly downstream adjacent to the RFP. | ||
+ | |2009:08:28 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |70 | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |71 | ||
+ | |pSB4A5 | ||
+ | |DH5α | ||
+ | |pSB4A5 | ||
+ | | | ||
+ | |Amp100 | ||
+ | |Low copy number, no promoter, no RBS. | ||
+ | |2009:08:28 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |72 | ||
+ | |pSB4C5 | ||
+ | |DB3.1 | ||
+ | |pSB4C5 | ||
+ | | | ||
+ | |Cm25 | ||
+ | |Low copy number, no promoter, no RBS. | ||
+ | |2009:08:28 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |73 | ||
+ | |OriT-L #13 | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | | | ||
+ | |2009:08:28 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |74 | ||
+ | |OriT-L #18 | ||
+ | |DH5α | ||
+ | |pSB1A2 | ||
+ | | | ||
+ | |Amp100 | ||
+ | | | ||
+ | |2009:08:28 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |75 | ||
+ | |[http://partsregistry.org/Part:BBa_J23116 BBa_J23116] Pconst | ||
+ | |DH5α | ||
+ | |[http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | ||
+ | | | ||
+ | |Amp100 | ||
+ | | | ||
+ | |2009:08:28 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |76 | ||
+ | |[http://partsregistry.org/Part:BBa_J23118 BBa_J23118] Pconst | ||
+ | |DH5α | ||
+ | |[http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | ||
+ | | | ||
+ | |Amp100 | ||
+ | | | ||
+ | |2009:08:28 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |77 | ||
+ | |pFB9008+H1 #13 | ||
+ | |DH5α λ pir | ||
+ | |pFB9007 | ||
+ | | | ||
+ | |Strep100/Kan20 | ||
+ | |Same as pFB9008, except that H1 region and its attP site are cloned in upstream of the RFP gene to flank the RFP. Low copy number. | ||
+ | |2009:08:28 | ||
+ | |||
+ | |- | ||
+ | |iGEM strain box 1 | ||
+ | |78 | ||
+ | |pSB4C5-1 | ||
+ | |DB3.1 | ||
+ | |pSB4C5 | ||
+ | | | ||
+ | |Cm25 | ||
+ | | | ||
+ | |2009:08:20 | ||
+ | |||
|- | |- | ||
+ | |iGEM strain box 1 | ||
+ | |79 | ||
+ | |pSB4C5-2 | ||
+ | |DB3.1 | ||
+ | |pSB4C5 | ||
+ | | | ||
+ | |Cm25 | ||
+ | | | ||
+ | |2009:08:20 |
Latest revision as of 00:25, 22 October 2009
Strain list
Location | Strain # | Name | Chassis/Strain | Plasmid Backbone | Registry Part | Antibiotic Resistance | Description | Reference Date |
---|---|---|---|---|---|---|---|---|
iGEM strain box 1 | 1 | rTT + PocI | DH5α | pMA (GeneArt) | [http://partsregistry.org/Part:BBa_K093003 BBa_K093003] | Amp100 | Synthesized. Contains BioBrick prefix and suffix. Reverse orientation transcriptional terminator R0015 with λ Pr promotor. | 2008:09:09 |
iGEM strain box 1 | 2 | rPlacTT | DH5α | pMA (GeneArt) | [http://partsregistry.org/Part:BBa_K093004 BBa_K093004] | Amp100 | Synthesized. Contains BioBrick prefix and suffix. Reverse [http://partsregistry.org/Part:BBa_R0011 BBa_R0011] and transcriptional terminator [http://partsregistry.org/Part:BBa_B0015 BBa_B0015]. | 2008:09:09 |
iGEM strain box 1 | 3 | PmeI | DH5α | pMA (GeneArt) | [http://partsregistry.org/Part:BBa_K093002 BBa_K093002] | Amp100 | Synthesized ORF. Contains BioBrick prefix and suffix. | 2008:09:09 |
iGEM strain box 1 | 4 | rfp'-14 | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_K093005 BBa_K093005] | Amp100 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) colony 14. | 2008:09:09 |
iGEM strain box 1 | 5 | rfp-2 | DH5α | pSB1AK3 | Amp100, Kan25 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) colony 2. Might need testing | 2008:09:09 | |
iGEM strain box 1 | 6 | Pconst-rfp-1 | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_K093012 BBa_K093012] | Amp100 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) under a constitutive promoter ([http://partsregistry.org/Part:BBa_J23118 BBa_J23118]). Might need testing. | 2008:09:09 |
iGEM strain box 1 | 7 | pRecA-3 | DH5α | psb2k3 | [http://partsregistry.org/Part:BBa_K093000 BBa_K093000] | Kan25 | Engineered RecA promoter with lexA consensus sequence. | 2008:10:17 |
iGEM strain box 1 | 8 | Pconst-rfp' 1 | DH5α | psb1a2 | Amp100 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) under a constitutive promoter ([http://partsregistry.org/Part:BBa_J23118 BBa_J23118]) | 2008:10:17 | |
iGEM strain box 1 | 9 | c0051' | DH5α | psb1a2 | [http://partsregistry.org/Part:BBa_K093006 BBa_K093006] | Amp100 | [http://partsregistry.org/Part:BBa_C0051 BBa_C0051] Repressor for Lambda Pr promoter with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]). Never got sequencing results of prefix. Rest was good | 2008:10:17 |
iGEM strain box 1 | 10 | PmeI - 14 | DH5α | psb2k3 | [http://partsregistry.org/Part:BBa_K093002 BBa_K093002] | Kan25 | PmeI cloned into BioBrick vector | 2008:10:17 |
iGEM strain box 1 | 11 | PrecA RFP' | DH5α | pSB2K3 | [http://partsregistry.org/Part:BBa_K093009 BBa_K093009] | Kan25 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) under the control of [http://partsregistry.org/Part:BBa_K093000 BBa_K093000] promoter | 2008:10:17 |
iGEM strain box 1 | 12 | PmeI' | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_K093013 BBa_K093013] | Amp100 | PmeI ([http://partsregistry.org/Part:BBa_K093002 BBa_K093002]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) | 2008:11:04 |
iGEM strain box 1 | 13 | Pr RFP' | DH5α | psb1a2 | [http://partsregistry.org/Part:BBa_K093010 BBa_K093010] | Amp100 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) under Lamda Pr promoter (R0051) | 2008:11:04 |
iGEM strain box 1 | 14 | T7 gene 6 | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_K093001 BBa_K093001] | Amp100 | good one, correct stop codon taataa | 2009:02:13 |
iGEM strain box 1 | 15 | PkNG101 | DH5α λ pir | Strep100 | Only replicates in λ pir lysogen (r6k origin of replication) http://bccm.belspo.be/db/lmbp_plasmid_details.php?NM=pKNG101 | 2009:02:xx | ||
iGEM strain box 1 | 16 | H1-4 pJET | DH5α | pJET | Amp100 | E. coli melA genomic DNA for homologous recombination (“left sequence”/H1) and attP site downstream | 2009:03:18 | |
iGEM strain box 1 | 17 | CI pJET | DH5α | pJET | Amp100 | CI repressor for lamda Pr promoter. [http://partsregistry.org/Part:BBa_C0051 BBa_C0051] with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) in pJET (made by crossover PCR) | 2009:03:xx | |
iGEM strain box 1 | 18 | pFB9002 | DH5α lamda pir | pfb9001 | Strep 100 | E. coli melA genomic DNA for homologous recombination (“left sequence”/H1) and attP site downstream | 2009:03:xx | |
iGEM strain box 1 | 19 | pJET H2 | DH5α | pJET | Amp100 | E. coli melA genomic DNA for homologous recombination (“right sequence”/H2) and attP site upstream | 2009:04:09 | |
iGEM strain box 1 | 20 | Pfb9003 | DH5α lamda pir | pfb9001 | Strep100 | E. coli melA genomic DNA for homologous recombination (“right sequence”/H2) and attP site upstream | 2009:04:23 | |
iGEM strain box 1 | 21 | pfb9004 | DH5α lamda pir | pfb9001 | Strep100 | Contains two attP sites flanked by E. coli melA genomic DNA for homologous recombination (H1 and H2) | 2009:04:23 | |
iGEM strain box 1 | 22 | pJET rfp-1 | DH5α | pJET | Amp100 | insert: Pconst ([http://partsregistry.org/Part:BBa_J23118 BBa_J23118]) rfp ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) EcoRV fragment for propagating pJET | 2009:04:24 | |
iGEM strain box 1 | 79 | pJET rfp-2 | DH5α | pJET | Amp100 | insert: Pconst rfp EcoRV fragment | 2009:04:24 | |
iGEM strain box 1 | 81 | pJET rfp-3 | DH5α | pJET | Amp100 | insert: Pconst rfp EcoRV fragment | 2009:04:24 | |
iGEM strain box 1 | 23 | RBS | DH5α | pSB1A2? | B0034 | Amp100 | Ribosome binding site (Elowitz) | |
iGEM strain box 1 | 24 | Pconst55% | DH5α | [http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | [http://partsregistry.org/Part:BBa_J23118 BBa_J23118] | Amp100 | Constitutive promoter. Expression level is 55% in comparison with the highest expression levels from this Pconst family (ex. wildtype promoter) | |
iGEM strain box 1 | 25 | TT | DH5α | pSB1AK3 | [http://partsregistry.org/Part:BBa_B0015 BBa_B0015] | Amp100, Kan25 | Default double transcriptional terminator | |
iGEM strain box 1 | 26 | rfp | DH5α | pSB2K3 | E1010 | Kan25 | Red fluorescent protein (shows up pink even without appropriate wavelength of light and filter) | |
iGEM strain box 1 | 27 | Pseudomonas mendocina | kr 1 | ? | Wrong strain for cloning PmeI (received from Paul Hatzinger at Shaw Environmental NJ). Degrades N-nitrodimethylamine (NDMA). Appl Environ Microbiol. 2006 Oct;72(10):6693-8. Epub 2006 Sep 1 | 2008:08:xx | ||
iGEM strain box 1 | 28 | Plac | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_R0010 BBa_R0010] | Amp100 | Wildtype LacI repressable promoter | |
iGEM strain box 1 | 29 | PtetR | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_R0040 BBa_R0040] | Amp100 | Promoter that is repressed by tetR and derepressed by tetracyclin. | |
iGEM strain box 1 | 30 | CI | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_C0051 BBa_C0051] | Amp100 | CI repressor for λ Pr promoter | |
iGEM strain box 1 | 31 | rTT | DH5α | pSB1A2 | B0025 | Amp100 | Reverse transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | 2008:xx:xx |
iGEM strain box 1 | 32 | Taq | DH5α | Amp100 | Taq strain from Moffatt lab for purifying taq | 2008:08:xx | ||
iGEM strain box 1 | 33 | Pconst+ | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_J23119 BBa_J23119] | Amp100 | Wildtype promoter─strongest of this promoter family ([http://partsregistry.org/Part:BBa_J23100 BBa_J23100]-[http://partsregistry.org/Part:BBa_J23119 BBa_J23119]) | |
iGEM strain box 1 | 34 | LacI | DH5α | pSB1A2 | [http://partsregistry.org/Part:BBa_C0012 BBa_C0012] | Amp100 | LacI repressor for Plac Promoter ([http://partsregistry.org/Part:BBa_R0010 BBa_R0010]) with LVA degredation tag | |
iGEM strain box 1 | 35 | Pconst4% | DH5α | [http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | [http://partsregistry.org/Part:BBa_J23109 BBa_J23109] | Amp100 | Constitutive promoter. Expression level is 4% in comparison with the highest expression levels from this Pconst family (ex. wildtype promoter) | |
iGEM strain box 1 | 36 | TTbi | DH5α | pSB1AK3 | [http://partsregistry.org/Part:BBa_B0014 BBa_B0014] | Amp100,Kan25 | Double terminator─not as strong as [http://partsregistry.org/Part:BBa_B0015 BBa_B0015] but more even efficiency for forward and reverse use. | |
iGEM strain box 1 | 37 | Pconst100% | DH5α | [http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | [http://partsregistry.org/Part:BBa_J23100 BBa_J23100] | Amp100 | Constitutive promoter. Expression level is 100%─the highest expression level for this Pconst family (i.e., wildtype promoter) | |
iGEM strain box 1 | 38 | PlacCI | DH5α | pSB2K3 | Kan25 | cI repressor ([http://partsregistry.org/Part:BBa_C0051 BBa_C0051]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) under the promoter Plac ([http://partsregistry.org/Part:BBa_R0011 BBa_R0011]). | 2009:04:xx | |
iGEM strain box 1 | 39 | pTC300 | DH5α | pUC19 | Cm10, Kan25 | Strain containing Kanamycin resistance gene, and SacB negative selection gene flanked together by BamHI sites | 2009:05:30 | |
iGEM strain box 1 | 40 | DB 3.1 | DB 3.1 | CCDB resistant strain, contains mutation in GyrA | 2009:05:30 | |||
iGEM strain box 1 | 41 | DH5α | DH5 alpha | For making competent cells. Default strain for | 2007:xx:xx | |||
iGEM strain box 1 | 42 | pFB9006 | DH5α λ pir | pFB9001 | Strep100/Kan20 | pFB9005+KanSac. pFB9001 containing H2 homologous region to E. coli melA gene. Does not contain H1 region. | 2009:06:xx | |
iGEM strain box 1 | 43 | pSB1A3 | DH5α | pSB1A3 | Amp 100 | BioBrick vector from 2009 registry. | 2009:06:16 | |
iGEM strain box 1 | 44 | luxI | DH5α | pSB1AK3 | Amp100, Kan 25?? | luxI ([http://partsregistry.org/Part:BBa_C0061 BBa_C0061]) +RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and transcriptional terminator ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | 2007:xx:xx | |
iGEM strain box 1 | 45 | PlaclasR | DH5α | pSB1A2 | Amp100 | lasR (C0079) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) under the control of a lac promoter (unsure which promoter - would need testing/sequencing) | 2007:xx:xx | |
iGEM strain box 1 | 46 | Plux rfp' | DH5α | pSB2K3 | Kan25 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) under Plux promoter | 2007:xx:xx | |
iGEM strain box 1 | 47 | Plas rfp' | DH5α | pSB2K3 | Kan25 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) under Plas promoter ([http://partsregistry.org/Part:BBa_R0079 BBa_R0079]) | 2007:xx:xx | |
iGEM strain box 1 | 48 | Ptet rfp' | DH5α | pSB2K3 | Kan25 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) under Ptet promoter ([http://partsregistry.org/Part:BBa_R0040 BBa_R0040]) | 2007:xx:xx | |
iGEM strain box 1 | 49 | PompR rfp' | DH5α | pSB2K3 | Kan25 | RFP ([http://partsregistry.org/Part:BBa_E1010 BBa_E1010]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) under PompR promoter | 2007:xx:xx | |
iGEM strain box 1 | 50 | tetR | DH5α | pSB2K3 | Kan25 | tetR repressor ([http://partsregistry.org/Part:BBa_C0040 BBa_C0040]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | 2007:xx:xx | |
iGEM strain box 1 | 51 | ??? | DH5α | pSB2K3 | Kan25 | |||
iGEM strain box 1 | 52 | lasI | DH5α | pSB2K3 | Kan25 | lasI ([http://partsregistry.org/Part:BBa_C0078 BBa_C0078]) with RBS ([http://partsregistry.org/Part:BBa_E0034 BBa_E0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | 2007:xx:xx | |
iGEM strain box 1 | 53 | tetR | DH5α | pSB2K3 | Kan25 | tetR repressor ([http://partsregistry.org/Part:BBa_C0040 BBa_C0040]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | 2007:xx:xx | |
iGEM strain box 1 | 54 | tetR' | DH5α | pSB1A2 | Amp100 | tetR repressor ([http://partsregistry.org/Part:BBa_C0040 BBa_C0040]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) | 2007:xx:xx | |
iGEM strain box 1 | 55 | lasR | DH5α | pSB1A2 | Amp100 | lasR ([http://partsregistry.org/Part:BBa_C0079 BBa_C0079]) with RBS ([http://partsregistry.org/Part:BBa_B0034 BBa_B0034]) and TT ([http://partsregistry.org/Part:BBa_B0015 BBa_B0015]) | 2007:xx:xx | |
iGEM strain box 1 | 56 | Plac IA7K | DH5α | pSB1A2 | Amp100 | ???? | ||
iGEM strain box 1 | 57 | pSB1A2 attB TG | DH5α | pSB1A2 | Amp100 | Was previously Pr RFP', RFP was cut out and attB TG was inserted. Flanked by EcoRI and PstI sites. | 2009:07:06 | |
iGEM strain box 1 | 58 | pSB1A2 attB TT | DH5α | pSB1A2 | Amp100 | Same as Strain #57, except the inserted fragment was attB TT instead. This is the wild-type attB. | 2009:07:06 | |
iGEM strain box 1 | 59 | pSB1A2 attB CT | DH5α | pSB1A2 | Amp100 | Same as Strain #57, except the inserted fragment was attB CT instead. | 2009:07:06 | |
iGEM strain box 1 | 60 | rPlacTT + PlacCI | DH5α | pSB2K3 | 2009:06:15 | |||
iGEM strain box 1 | 61 | 2008 Construct w/o Promoter | DH5α | pSB1A2 | Amp100 | RBS + Pmel + rPlacTT + PlacCI. 2008 project. | 2009:07:10 | |
iGEM strain box 1 | 62 | 2008 Constant | DH5α | Amp100 | 2009:07:15 | |||
iGEM strain box 1 | 63 | pSB3C5 | DB3.1 | pSB3C5 | Cm25 | Low copy # plasmid, no promoter, no RBS, "CCDD" (BBa 15001/15002)? | ||
iGEM strain box 1 | 64 | BBa | pSB3C5 | |||||
iGEM strain box 1 | 65 | pKNG101 | DH5α | pKNG101 | Strep100 | Plasmid backbone for the pFB9xxx series. | 2009:08:07 | |
iGEM strain box 1 | 66 | DH5α λ pir | DH5 alpha lambda pir | None | None | DH5α λ pir stock for making competent cells. | 2009:07:24 | |
iGEM strain box 1 | 67 | pFB9007 | DH5α λ pir | pFB9001 | Strep100 | Contains H2 region and an attP site. Same as pFB9004 except w/o the truncated SacB gene on the plasmid backbone. | 2009:08:05 | |
iGEM strain box 1 | 68 | pFB9008 | DH5α λ pir | pFB9007 | Strep100 | Same as pFB9007, but it has RFP cloned in upstream of the attP site and the H2 region. | 2009:08:05 | |
iGEM strain box 1 | 69 | pFB9009 #2 | DH5α λ pir | pFB9008+H1 | Strep100/Kan20 | Same as pFB9008+H2, but it has Kanr and sacB genes cloned in between the H1&H2 regions, directly downstream adjacent to the RFP. | 2009:08:28 | |
iGEM strain box 1 | 70 | |||||||
iGEM strain box 1 | 71 | pSB4A5 | DH5α | pSB4A5 | Amp100 | Low copy number, no promoter, no RBS. | 2009:08:28 | |
iGEM strain box 1 | 72 | pSB4C5 | DB3.1 | pSB4C5 | Cm25 | Low copy number, no promoter, no RBS. | 2009:08:28 | |
iGEM strain box 1 | 73 | OriT-L #13 | DH5α | pSB1A2 | Amp100 | 2009:08:28 | ||
iGEM strain box 1 | 74 | OriT-L #18 | DH5α | pSB1A2 | Amp100 | 2009:08:28 | ||
iGEM strain box 1 | 75 | [http://partsregistry.org/Part:BBa_J23116 BBa_J23116] Pconst | DH5α | [http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | Amp100 | 2009:08:28 | ||
iGEM strain box 1 | 76 | [http://partsregistry.org/Part:BBa_J23118 BBa_J23118] Pconst | DH5α | [http://partsregistry.org/Part:BBa_J61002 BBa_J61002] | Amp100 | 2009:08:28 | ||
iGEM strain box 1 | 77 | pFB9008+H1 #13 | DH5α λ pir | pFB9007 | Strep100/Kan20 | Same as pFB9008, except that H1 region and its attP site are cloned in upstream of the RFP gene to flank the RFP. Low copy number. | 2009:08:28 | |
iGEM strain box 1 | 78 | pSB4C5-1 | DB3.1 | pSB4C5 | Cm25 | 2009:08:20 | ||
iGEM strain box 1 | 79 | pSB4C5-2 | DB3.1 | pSB4C5 | Cm25 | 2009:08:20 |