Team:Warsaw/Calendar-Main/22 April 2009

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<p>Tasks:</p>
<p>Tasks:</p>
<ul>
<ul>
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<li>Amplification of mgtc and hly</li>
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<li>Amplification of hly</li>
</ul>
</ul>
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Revision as of 00:31, 10 June 2009


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PCR mgtc, hly

Kamila


Tasks:

  • Amplification of hly

Methods:

  • PCR mixture's composition:

    2ul buffer, 1ul MgCl2, 0,5ul primers, 1,5ul dNTPs (10 mM), 01,ul polymerase, solution was topped up with H2O to 20ul.

    2 repeats of every sample were made.

  • PCR programs:
  • mgtc

    90s 95°C 
    (30s 95°C, 35s 48°C, 60s 72°C)x2
    (30s 95°C, 35s 58°C, 60s 72°C)x28
    600s 72°C
    ~ 4°C

    hly

    90s 95°C 
    (30s 95°C, 35s 42°C, 150s 72°C)x2
    (30s 95°C, 35s 47°C, 150s 72°C)x28
    600s 72°C
    ~ 10°C
  • Electrophoretic separation on 1% agarose gel

Results:

  • Gel (from left)
  1. GeneRuler DNA Ladder Mix #SM0333 (Fermentas)
  2. mgtc 1 repeat
  3. mgtc 2 repeat
  4. mgtc sample -
  5. hly 1 repeat
  6. hly 2 repeat
  7. hly sample -

Notes:

  • Inappropriate template DNA was used for mgtc (ganomic DNA from Yersinia instead of genomic DNA from Listeria).