Team:EPF-Lausanne/Modeling

From 2009.igem.org

(Difference between revisions)
(To envisage)
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:- Characterize how the J-alpha helix changes  
:- Characterize how the J-alpha helix changes  
:- Model structural changes that enhance the switch feature of LOVTAP e.g. in dark phase: really weak interaction between LOVTAP and the corresponding DNA sequence, in light phase: strong binding of LOVTAP on DNA.
:- Model structural changes that enhance the switch feature of LOVTAP e.g. in dark phase: really weak interaction between LOVTAP and the corresponding DNA sequence, in light phase: strong binding of LOVTAP on DNA.
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==To envisage ==
==To envisage ==

Revision as of 14:01, 28 July 2009

Contents

Modeling





To do

- Model allosteric interactions between LOVTAP & TrpR
What will be done:
- Model of LOVTAP in dark phase
- Model of LOVTAP in light phase
- Characterize how the J-alpha helix changes
- Model structural changes that enhance the switch feature of LOVTAP e.g. in dark phase: really weak interaction between LOVTAP and the corresponding DNA sequence, in light phase: strong binding of LOVTAP on DNA.


To envisage


- Molecular mutational assay