Team:TUDelft/Conjugation Results
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Image:TUDelft-aug5-2009-conj-test-plate-D2-noGFP.jpg|Set 1 Donors 10<sup>-2</sup> dilution plate | Image:TUDelft-aug5-2009-conj-test-plate-D2-noGFP.jpg|Set 1 Donors 10<sup>-2</sup> dilution plate |
Revision as of 20:24, 19 October 2009
Conjugation Results
Verification and Characterization of Wild R751
A conjugation test was done using our conjugation protocol to determine wild R751 conjugation efficiency.
Donors: NCCBNr# 2350 cells with R751 (TRI)
Receivers: DH5 α cells with I13522 (AMP)
Transconjugants: DH5 α cells with R751 and I13522 (TRI+AMP)
The following table shows the calculated conjugation efficiencies (raw data here):
Data Set | Conjugation Efficiency |
1 | 0.028 |
2 | 0.028 |
3 | 0.025 |
|
Verification and Characterization of trbK entry exclusion protein
Verification and Characterization of Conjugation Testing Plasmid 1
A conjugation test was done using our conjugation protocol to verify that Conjugation Testing Plasmid 1 was transmitted during conjugation.
Donors: NCCBNr# 2350 cells with R751 and Conjugation Testing Plasmid 1 (TRI+CAM)
Receivers: DH5 α cells with J23100 (AMP)
Transconjugants 1: DH5 α cells with R751 and J23100 (TRI+AMP)
Transconjugants 2: DH5 α cells with Conjugation Testing Plasmid 1 and J23100 (CAM+AMP)
The following table shows the calculated conjugation efficiencies (raw data here):
Set # | Conjugation Efficiency for Conjugation Testing Plasmid 1 | Conjugation Efficiency for wild R751 |
1 | 0.00177 | 0.0141 |
2 | 0.00224 | 0.0476 |
3 | n/a | 0.0356 |
The reason for the lower efficiency of Conjugation Testing Plasmid 1 compared to R751 is the presence of the entry exclusion protein trbK. If a receiver cell gets Conjugation Testing Plasmid 1, it can still receive R751 afterwards. But if a receiver cell gets R751, it will not accept Conjugation Testing Plasmid 1 afterwards because trbK expression will block incoming transfers.
This test will be redone with R751 ΔoriTR cells once they are available.
R751 Gene Knockouts