Deposited BioBricks.html

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Deposited BioBricks


Designed BioBricks

We have designed four NEW functionalised linker-extension standard vectors. All together, 106 parts were generated all cloned into our NEW functionalised linker-extension standard vectors and forty-one were single coding, thirteen intermediates and forty-eight composite parts.

Plasmid backbones

Four NEW linker-extension standard vectors are constructed.


NameTypeDescriptionLength
BBa_K245005Plasmid_BackboneBB-NIC-II-HisN2261
BBa_K245006Plasmid_BackboneBB-NIC-II-NC2240
BBa_K245007Plasmid_BackboneBB-NIC-II-HisC2167
BBa_K245008Plasmid_BackboneBB-NIC-III-HisN2261


The coding sequences

The forty-one BioBrick coding sequences are prepared and are listed as (i) coiled-coil-forming segments, (ii) oligimerisation domains, (iii) functional domains and others.

Coiled-coil segments

NameTypeDescriptionLength
BBa_K245038CodingNZ - cc homodimer87
BBa_K245039CodingCZ90
BBa_K245118CodingP199
BBa_K245119CodingP299
BBa_K245120CodingP399
BBa_K245121CodingP499
BBa_K245122CodingP599
BBa_K245123CodingP699
BBa_K245124CodingP799
BBa_K245125CodingP899
BBa_K245126CodingH199
BBa_K245127CodingGCN99
BBa_K245132CodingAPH190
BBa_K245133CodingAPH135
BBa_K245134CodingBCR108


Oligomerization domains

NameTypeDescriptionLength
BBa_K245026CodingTA63
BBa_K245027CodingTB63
BBa_K245028CodingTC63
BBa_K245029CodingT1W_DDD189
BBa_K245030CodingT1W_KKK189
BBa_K245031CodingT1W_EEE186
BBa_K245042CodingVASP135
BBa_K245116CodingGyrB657
BBa_K245117CodingGyrB-SG663
BBa_K245128Codingp5390
BBa_K245129CodingCutA1333
BBa_K245130CodingT1W_AEA186
BBa_K245141Codingfoldon81


Functional domains

NameTypeDescriptionLength
BBa_K245021CodingcYFP252
BBa_K245022CodingnYFP462
BBa_K245024CodingZ136
BBa_K245025CodingAUP36
BBa_K245046CodingccdB306
BBa_K245113CodingKSI-DP378
BBa_K245114CodingLL37111
BBa_K245115CodingKSI-DP-P2/33405
BBa_K245140CodingmNGF669


Others

NameTypeDescriptionLength
BBa_K245131CodingELST150
BBa_K245139CodingRADA66



The intermediate sequences

Thirteen BioBricks with intermediate parts are constructed.

NameTypeDescriptionLength
BBa_K245048IntermediateH1-P2204
BBa_K245049IntermediateKSI-DP-P1489
BBa_K245052IntermediateGCN_P2204
BBa_K245053IntermediateP4-H1204
BBa_K245054IntermediateP2-H1204
BBa_K245055IntermediateP6-H1204
BBa_K245056IntermediateP3-P5204
BBa_K245057IntermediateP4-P2204
BBa_K245059IntermediateLL37-ELST267
BBa_K245060IntermediateELST-ELST-ELST462
BBa_K245061IntermediateELST-ELST306
BBa_K245096IntermediateBCR-P2213
BBa_K245097IntermediateAPH-P2240



Composite parts

The forty-eight BioBricks as composites are prepared, which are used in (i) polypeptide manufacturing, (ii) polypeptide membranes, (iii) coiled-coil polyhedra, (iv) regulated assembly and (v) functional biopolymers.


Polypeptide manufacturing

NameTypeDescriptionLength
BBa_K245115CodingKSI-DP-P2/33405


Polypeptide membrane

NameTypeDescriptionLength
BBa_K245091Compositep53-APH1186
BBa_K245092Compositep53-APH231
BBa_K245093Compositep53-BCR204
BBa_K245099CompositeAPH-p53231
BBa_K245100CompositeBCR-p53204


Coiled-coil polyhedra

NameTypeDescriptionLength
BBa_K245066CompositeP1-GCN-P2309


Regulated assembly

NameTypeDescriptionLength
BBa_K245098CompositeGyrB-foldon744
BBa_K245050CompositeGyrB-CutA1996
BBa_K245051CompositeGyrB-SG-SG-CutA11002


Functional biopolymers

NameTypeDescriptionLength
BBa_K245102CompositeLL37-ELST-GCN-ELST-P2633
BBa_K245105CompositeELST-ELST-ELST-mNGF1137



Slovenia 2009 iGEM Team Parts Sandbox



NameTypeDescriptionLength
BBa_K245005Plasmid_BackboneBB-NIC-II-HisN2261
BBa_K245006Plasmid_BackboneBB-NIC-II-NC2240
BBa_K245007Plasmid_BackboneBB-NIC-II-HisC2167
BBa_K245008Plasmid_BackboneBB-NIC-III-HisN2261
BBa_K245009DNARFC 37 Scar Sequence6
BBa_K245021CodingcYFP252
BBa_K245022CodingnYFP462
BBa_K245024CodingZ136
BBa_K245025CodingAUP36
BBa_K245026CodingTA63
BBa_K245027CodingTB63
BBa_K245028CodingTC63
BBa_K245029CodingT1W_DDD189
BBa_K245030CodingT1W_KKK189
BBa_K245031CodingT1W_EEE186
BBa_K245038CodingNZ - cc homodimer87
BBa_K245039CodingCZ90
BBa_K245042CodingVASP135
BBa_K245046CodingccdB306
BBa_K245048IntermediateH1-P2204
BBa_K245049IntermediateKSI-DP-P1489
BBa_K245050CompositeGyrB-CutA1996
BBa_K245051CompositeGyrB-SG-SG-CutA11002
BBa_K245052IntermediateGCN_P2204
BBa_K245053IntermediateP4-H1204
BBa_K245054IntermediateP2-H1204
BBa_K245055IntermediateP6-H1204
BBa_K245056IntermediateP3-P5204
BBa_K245057IntermediateP4-P2204
BBa_K245058CompositeKSI-DP-P6489
BBa_K245059IntermediateLL37-ELST267
BBa_K245060IntermediateELST-ELST-ELST462
BBa_K245061IntermediateELST-ELST306
BBa_K245062CompositeP1-H1-P2309
BBa_K245063CompositeKSI-DP-P1-H1-P2699
BBa_K245064CompositeP1-BCR-P2318
BBa_K245065CompositeP1-APH-P2345
BBa_K245066CompositeP1-GCN-P2309
BBa_K245067CompositeP3-P4-H1309
BBa_K245068CompositeP1-P3-P5309
BBa_K245069CompositeKSI-DP-P1-P3-P5699
BBa_K245070CompositeP6-P4-P2309
BBa_K245071CompositeKSI-DP-P6-P4-P2699
BBa_K245072CompositeKSI-DP-LL37-ELST657
BBa_K245073CompositeKSI-DP-LL37-ELST-ELST-ELST-ELST1125
BBa_K245074CompositeKSI-DP-LL-37-ELST-GCN-ELST918
BBa_K245075CompositeKSI-DP-EEE576
BBa_K245076CompositeKSI_DP-LL37-ELST-P2-ELST918
BBa_K245077CompositeKSI-DP-LL37-ELST-P4-ELST918
BBa_K245078CompositeLL37-ELST-GCN-ELST528
BBa_K245079CompositeGCN-ELST255
BBa_K245080DNAscar Xba/Spe NgoMIV12
BBa_K245081CompositeP2-ELST255
BBa_K245082CompositeP4-ELST255
BBa_K245083CompositeTA-P1168
BBa_K245084CompositeTB-P3168
BBa_K245085CompositeTC-P5168
BBa_K245086CompositeP2-TA168
BBa_K245087CompositeP4-TB168
BBa_K245088CompositeTC-P5168
BBa_K245089Compositefoldon-APH222
BBa_K245090Compositefoldon-BCR195
BBa_K245091Compositep53-APH1186
BBa_K245092Compositep53-APH231
BBa_K245093Compositep53-BCR204
BBa_K245094Compositefoldon-p53177
BBa_K245095CompositeGyrB-p53753
BBa_K245096IntermediateBCR-P2213
BBa_K245097IntermediateAPH-P2240
BBa_K245098CompositeGyrB-foldon744
BBa_K245099CompositeAPH-p53231
BBa_K245100CompositeBCR-p53204
BBa_K245101CompositeLL37-ELST-GCN-ELST-P1633
BBa_K245102CompositeLL37-ELST-GCN-ELST-P2633
BBa_K245105CompositeELST-ELST-ELST-mNGF1137
BBa_K245106CompositeRADA-mNGF741
BBa_K245107CompositeLL37-ELST-GCN-ELST-mNGF1203
BBa_K245108CompositeKSI-DP-P2/33-LL37-ELST-GCN-ELST945
BBa_K245111CompositeP2-P6-H1309
BBa_K245112CompositeP5-P2-H1309
BBa_K245113CodingKSI-DP378
BBa_K245114CodingLL37111
BBa_K245115CodingKSI-DP-P2/33405
BBa_K245116CodingGyrB657
BBa_K245117CodingGyrB-SG663
BBa_K245118CodingP199
BBa_K245119CodingP299
BBa_K245120CodingP399
BBa_K245121CodingP499
BBa_K245122CodingP599
BBa_K245123CodingP699
BBa_K245124CodingP799
BBa_K245125CodingP899
BBa_K245126CodingH199
BBa_K245127CodingGCN99
BBa_K245128Codingp5390
BBa_K245129CodingCutA1333
BBa_K245130CodingT1W_AEA186
BBa_K245131CodingELST150
BBa_K245132CodingAPH190
BBa_K245133CodingAPH135
BBa_K245134CodingBCR108
BBa_K245135CodingAPHE135
BBa_K245139CodingRADA66
BBa_K245140CodingmNGF669
BBa_K245141Codingfoldon81
BBa_K245200CompositeP1-P4-H1309



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