Team:UNICAMP-Brazil/Notebooks/September 17
From 2009.igem.org
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*<p style=”text-align:justify;”>Since the enzymes XbaI and SpeI produce compatible cohesive ends, the fragments PY1 and PY2 digested with this enzymes can be inserted in both orientations in the plasmid digested with the same enzymes. So, it will be necessary to do a screening of the transformants to find those ones that have the plasmid with the fragment inserted in the right orientation.</p> | *<p style=”text-align:justify;”>Since the enzymes XbaI and SpeI produce compatible cohesive ends, the fragments PY1 and PY2 digested with this enzymes can be inserted in both orientations in the plasmid digested with the same enzymes. So, it will be necessary to do a screening of the transformants to find those ones that have the plasmid with the fragment inserted in the right orientation.</p> | ||
- | *<p style=”text-align:justify;”>We then selected 15 colonies of each transformation we did yesterday to perform a colony-PCR screening. In this PCR we used the forward primer of the inserted fragment and the reverse verification primer (VR) of the plasmid. Only in those colonies that have the plasmid with the fragment inserted in the right orientation this pair of primers would be able to amplify a fragment.</p> | + | *<p style=”text-align:justify;”>We then selected 15 colonies of each transformation we did yesterday (PY1 + BBa_J23100 and PY2 + BBa_J23100) to perform a colony-PCR screening. In this PCR we used the forward primer of the inserted fragment and the reverse verification primer (VR) of the plasmid. Only in those colonies that have the plasmid with the fragment inserted in the right orientation this pair of primers would be able to amplify a fragment.</p> |
*<p style=”text-align:justify;”>We then chose 4 candidate colonies in the agarose gel of the PCR. 2 with PY1 and 2 with PY2:</p> | *<p style=”text-align:justify;”>We then chose 4 candidate colonies in the agarose gel of the PCR. 2 with PY1 and 2 with PY2:</p> | ||
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GEL | GEL | ||
- | *<p style=”text-align:justify;”>We inoculated this colonies to perform mini-prep for plasmid extraction tomorrow.</p> | + | *<p style=”text-align:justify;”>We inoculated this colonies in liquid LB-AMP at 37ºC to perform mini-prep for plasmid extraction tomorrow.</p> |
''Fabi and Léo'' | ''Fabi and Léo'' | ||
{{:Team:UNICAMP-Brazil/inc_rodape}} | {{:Team:UNICAMP-Brazil/inc_rodape}} |
Revision as of 00:18, 20 October 2009
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