Team:Edinburgh/modelling(results)
From 2009.igem.org
(Difference between revisions)
Clonerohin (Talk | contribs) |
|||
(16 intermediate revisions not shown) | |||
Line 85: | Line 85: | ||
float:left; | float:left; | ||
width:150px; | width:150px; | ||
- | margin-top: | + | margin-top:125px; |
border-top:6px solid #CA9A38; | border-top:6px solid #CA9A38; | ||
border-bottom:6px solid #CA9A38; | border-bottom:6px solid #CA9A38; | ||
+ | } | ||
+ | |||
+ | #Upgradebox { | ||
+ | background-color:#dae7b4; | ||
+ | float:left; | ||
+ | width:150px; | ||
+ | margin-top:320px; | ||
+ | border-top:6px solid #CA9A38; | ||
+ | border-bottom:6px solid #CA9A38; | ||
+ | font-size:11px; | ||
+ | font-family:Arial; | ||
+ | color:#556B2F; | ||
+ | } | ||
+ | |||
+ | #Upgradenote { | ||
+ | padding:5%; | ||
} | } | ||
Line 98: | Line 114: | ||
#contentmenu { | #contentmenu { | ||
margin-bottom:30px; | margin-bottom:30px; | ||
- | margin-left: | + | margin-left:251px; |
text-decoration: none | text-decoration: none | ||
} | } | ||
Line 107: | Line 123: | ||
margin-bottom:2px; | margin-bottom:2px; | ||
background-color: #e5e7e2; | background-color: #e5e7e2; | ||
- | height: | + | height:620px; |
width:795px; | width:795px; | ||
- | font-size: | + | font-size:12px; |
text-align:justify; | text-align:justify; | ||
} | } | ||
Line 183: | Line 199: | ||
<div id=main> | <div id=main> | ||
<div id=leftspace> | <div id=leftspace> | ||
+ | <div id="Upgradebox"> | ||
+ | <div id="Upgradenote" align="left"> | ||
+ | Our WIKI is best viewed with (click title):<br /><br /> | ||
+ | * <a target="_blank" style="color:#00008B;text-decoration:underline;" href="http://www.microsoft.com/windows/Internet-explorer/default.aspx">Internet Explorer 8</a> <br /> | ||
+ | * <a target="_blank" style="color:#00008B;text-decoration:underline;" href="http://www.mozilla.com/en-US/">Firefox 3</a><br /> | ||
+ | * <a target="_blank" style="color:#00008B;text-decoration:underline;" href="http://get.adobe.com/flashplayer/">Adobe Flash Player 10</a> <br /><br /> | ||
+ | If you encounter any visual problems please upgrade your browser to the latest version in order to get the most out of our WIKI. Thank you! | ||
+ | </div> | ||
+ | </div> | ||
</div> | </div> | ||
<div id=mainmenu> | <div id=mainmenu> | ||
Line 190: | Line 215: | ||
<div id=menuitem > <a href="https://2009.igem.org/Team:Edinburgh/reallifeapplication%28scaleup%29"> Scale Up </a> </div> | <div id=menuitem > <a href="https://2009.igem.org/Team:Edinburgh/reallifeapplication%28scaleup%29"> Scale Up </a> </div> | ||
<div id=menuitem > <a href="https://2009.igem.org/Team:Edinburgh/modelling%28results%29"> Results </a> </div> | <div id=menuitem > <a href="https://2009.igem.org/Team:Edinburgh/modelling%28results%29"> Results </a> </div> | ||
- | |||
<div id=menuitem > <a href="https://2009.igem.org/Team:Edinburgh/modelling%28references%29"> References </a> </div> | <div id=menuitem > <a href="https://2009.igem.org/Team:Edinburgh/modelling%28references%29"> References </a> </div> | ||
</div> | </div> | ||
Line 197: | Line 221: | ||
<ul id="nav" class="dropdown dropdown-horizontal"> | <ul id="nav" class="dropdown dropdown-horizontal"> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh">Home</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh">Home</a></li> | ||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
<li><a href="https://2009.igem.org/Team:Edinburgh/biology%28overalldescription%29" class="dir">Biology</a> | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28overalldescription%29" class="dir">Biology</a> | ||
<ul> | <ul> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/biology%28overalldescription%29">Overall Description and Design</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28overalldescription%29">Overall Description and Design</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28tntsensing%29">TNT-Sensing Pathway</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28nitritenitratesensing%29">Nitrite/Nitrate-Sensing Pathway</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28biobricks%29">Biobrick Parts</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28results%29">Results</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28solvedproblems%29">Problem Solving and Tips</a></li> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/biology%28materialsandmethods%29">Materials and Methods</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28materialsandmethods%29">Materials and Methods</a></li> | ||
- | |||
- | |||
- | |||
- | |||
<li><a href="https://2009.igem.org/Team:Edinburgh/biology%28references%29">References</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/biology%28references%29">References</a></li> | ||
</ul> | </ul> | ||
Line 227: | Line 242: | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/reallifeapplication%28scaleup%29">Scale Up</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/reallifeapplication%28scaleup%29">Scale Up</a></li> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/modelling%28results%29">Results</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/modelling%28results%29">Results</a></li> | ||
- | |||
<li><a href="https://2009.igem.org/Team:Edinburgh/modelling%28references%29">References</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/modelling%28references%29">References</a></li> | ||
</ul> | </ul> | ||
</li> | </li> | ||
- | <li><a href="https://2009.igem.org/Team:Edinburgh/ethics% | + | <li><a href="https://2009.igem.org/Team:Edinburgh/ethics%28publicperception%29" class="dir">Underlying Philosophy</a> |
<ul> | <ul> | ||
- | <li><a href="https://2009.igem.org/Team:Edinburgh/ethics% | + | <li><a href="https://2009.igem.org/Team:Edinburgh/ethics%28publicperception%29">Public Perception</a></li> |
<li><a href="https://2009.igem.org/Team:Edinburgh/ethics%28legislationissues%29">Legislation issues</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/ethics%28legislationissues%29">Legislation issues</a></li> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/ethics%28biosafety%29">Biosafety</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/ethics%28biosafety%29">Biosafety</a></li> | ||
- | + | <li><a href="https://2009.igem.org/Team:Edinburgh/ethics%28summary%29">DEMOCS Card Game</a></li> | |
- | + | ||
- | + | ||
- | <li><a href="https://2009.igem.org/Team:Edinburgh/ethics%28summary%29"> | + | |
</ul> | </ul> | ||
</li> | </li> | ||
- | <li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28introduction%29" class="dir"> | + | <li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28introduction%29" class="dir">Informatics</a> |
<ul> | <ul> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28introduction%29">Introduction</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28introduction%29">Introduction</a></li> | ||
- | |||
<li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28globetutorial%29">Globe Tutorial</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28globetutorial%29">Globe Tutorial</a></li> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28igemwikhacks%29">iGEM WIKI Hacks</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28igemwikhacks%29">iGEM WIKI Hacks</a></li> | ||
- | <li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28conclusions%29"> | + | <li><a href="https://2009.igem.org/Team:Edinburgh/newinformatics%28conclusions%29">Blog Entry</a></li> |
</ul> | </ul> | ||
</li> | </li> | ||
- | + | ||
- | + | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/Notebook">Notebook</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/Notebook">Notebook</a></li> | ||
- | <li><a href="https://2009.igem.org/Team:Edinburgh/team% | + | <li><a href="https://2009.igem.org/Team:Edinburgh/team%28teammembers%29" class="dir">Team</a> |
<ul> | <ul> | ||
- | |||
- | |||
<li><a href="https://2009.igem.org/Team:Edinburgh/team%28teammembers%29">Team Members</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/team%28teammembers%29">Team Members</a></li> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/team%28advisors%29">Advisors</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/team%28advisors%29">Advisors</a></li> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/team%28supervisors%29">Supervisors</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/team%28supervisors%29">Supervisors</a></li> | ||
- | |||
<li><a href="https://2009.igem.org/Team:Edinburgh/team%28gallery%29">Gallery</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/team%28gallery%29">Gallery</a></li> | ||
<li><a href="https://2009.igem.org/Team:Edinburgh/team%28contacts%29">Contacts</a></li> | <li><a href="https://2009.igem.org/Team:Edinburgh/team%28contacts%29">Contacts</a></li> | ||
Line 278: | Line 284: | ||
<img src="https://static.igem.org/mediawiki/2009/6/68/EdinburghPagemarker.jpg" style="margin-left:766px;"> | <img src="https://static.igem.org/mediawiki/2009/6/68/EdinburghPagemarker.jpg" style="margin-left:766px;"> | ||
- | + | <img src="https://static.igem.org/mediawiki/2009/9/9b/GeneRegulatoryNetworkResults.jpg" style="margin-left:-5px;margin-top:0px;"> | |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | <img src="https://static.igem.org/mediawiki/2009/ | + | |
<div id="text" style="margin-left:20px;margin-top:10px;padding-bottom:15px;"> | <div id="text" style="margin-left:20px;margin-top:10px;padding-bottom:15px;"> | ||
- | |||
- | + | Results from the model show this is the optimal setup to build the model: <br /><br /> | |
+ | <center><img src="https://static.igem.org/mediawiki/2009/2/2d/ResultingGeneRegulatoryNetwork.jpg"></center> | ||
<br /><br /> | <br /><br /> | ||
+ | <center>When nitrates/nitrites and TNT are present:</center> | ||
+ | <center><img src="https://static.igem.org/mediawiki/2009/6/61/Generesult4.jpg"></center> | ||
+ | <center>Everything is expressed, and a yellow light is seen as the GFP fusion protein of the luciferase activates the EYFP.</center> | ||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
</div> | </div> | ||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
- | |||
</div> | </div> | ||
<div id=bottombox> | <div id=bottombox> |
Latest revision as of 23:05, 21 October 2009
Our WIKI is best viewed with (click title):
* Internet Explorer 8
* Firefox 3
* Adobe Flash Player 10
If you encounter any visual problems please upgrade your browser to the latest version in order to get the most out of our WIKI. Thank you!
* Internet Explorer 8
* Firefox 3
* Adobe Flash Player 10
If you encounter any visual problems please upgrade your browser to the latest version in order to get the most out of our WIKI. Thank you!
Results from the model show this is the optimal setup to build the model:
When nitrates/nitrites and TNT are present:
Everything is expressed, and a yellow light is seen as the GFP fusion protein of the luciferase activates the EYFP.
Edinburgh University iGEM Team 2009