Team:Paris/NoteBook

From 2009.igem.org

(Difference between revisions)
Line 38: Line 38:
|width=15%| Products in use
|width=15%| Products in use
|width=5%| Date
|width=5%| Date
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP1
 
-
|<bbpart>pJ23100</bbpart> in <bbpart>J61002</bbpart>
 
-
|Strong constitutive promoter in J61002 (clones 1 + 2) <partinfo>pJ23100 SpecifiedComponents</partinfo>
 
-
|
 
-
| [[Paris/July 15| July 15]], [[Paris/August 17| Aug. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP2
 
-
|<bbpart>pJ23107</bbpart> in <bbpart>J61002</bbpart>
 
-
|Medium constitutive promoter in J61002 (clones 1 + 2) <partinfo>pJ23107 SpecifiedComponents</partinfo>
 
-
|MP2.2
 
-
| [[Paris/July 15| July 15]], [[Paris/August 17| Aug. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP3
 
-
|<bbpart>B0015</bbpart> in <bbpart>pSB1AK3</bbpart>
 
-
|Double terminator (clones 1 + 2) <partinfo>B0015 SpecifiedComponents</partinfo>
 
-
|MP3.3, MP3.4
 
-
| [[Paris/August 14| August 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP4
 
-
|<bbpart>I0500</bbpart> in <bbpart>pSB2K3</bbpart>
 
-
|AraC pBAD (clones 1 + 2) <partinfo>I0500 SpecifiedComponents</partinfo>
 
-
|
 
-
| [[Paris/July 16| July 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP5
 
-
|<bbpart>BBa_B0030</bbpart> in <bbpart>pSB1A2</bbpart>
 
-
|Strong RBS (clones 1 + 2) <partinfo>B0030 SpecifiedComponents</partinfo>
 
-
|
 
-
| [[Paris/July 18| July 18]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP6
 
-
|<bbpart>BBa_E0422</bbpart> in <bbpart>pSB1A2</bbpart>
 
-
|ECFP (RBS+LVA+Term) (clones 1 + 2) <partinfo>E0422 SpecifiedComponents</partinfo>
 
-
|MP6'.1, MP6'.2
 
-
| [[Paris/July 18| July 18]], [[Paris/July 24| July 24]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP7
 
-
|<bbpart>BBa_E0241</bbpart> in <bbpart>pSB1A2</bbpart>
 
-
|PoPs to GFP converter (clones 1 + 2) <partinfo>BBa_E0241 DeepComponents</partinfo>
 
-
|MP7'.1
 
-
| [[Paris/July 18| July 18]], [[Paris/July 24| July 24]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP8
 
-
|<bbpart>BBa_E0840</bbpart> in <bbpart>pSB1A2</bbpart>
 
-
|gfp tri-part; strong rbs (clones 1 + 2) <partinfo>E0840 SpecifiedComponents</partinfo>
 
-
|
 
-
| [[Paris/July 18| July 18]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP9
 
-
|<bbpart>BBa_J61047</bbpart> in <bbpart>pSB1A2</bbpart>
 
-
|Cre ORF (clones 1 + 2) <partinfo>J61047 SpecifiedComponents</partinfo>
 
-
|MP9'.1, MP9'.2
 
-
| [[Paris/July 18| July 18]], [[Paris/July 24| July 24]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP10
 
-
|<bbpart>BBa_I0500</bbpart> in <bbpart>pSB2K3</bbpart>
 
-
|AraC pBAD (clones 1 + 2) <partinfo>I0500 SpecifiedComponents</partinfo>
 
-
|
 
-
| [[Paris/July 20| July 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP11
 
-
|<bbpart>BBa_pJ23107</bbpart> in <bbpart>p61002</bbpart>
 
-
|Medium constitutive promoter in J61002 (clones 3 + 4) <partinfo>pJ23107 SpecifiedComponents</partinfo>
 
-
|MP11'.3
 
-
| [[Paris/July 20| July 20]], [[Paris/July 23| July 23]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP12
 
-
|<bbpart>BBa_P1003</bbpart> in <bbpart>pSB1A2</bbpart>
 
-
|KanR <partinfo>P1003 SpecifiedComponents</partinfo>
 
-
|
 
-
| [[Paris/July 27| July 27]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP13
 
-
|<bbpart>BBa_J61002</bbpart>
 
-
|ptet-mRFP <partinfo>J61002 SpecifiedComponents</partinfo>
 
-
|MP13.1, MP13.2
 
-
| [[Paris/August 14| August 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP14
 
-
|<bbpart>BBa_J61025</bbpart>
 
-
|Medium constitutive promoter in J61002 (clones 1 + 2) <partinfo>BBa_J61025 SpecifiedComponents</partinfo>
 
-
|MP14.1, MP14.2
 
-
| [[Paris/August 14| August 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L1
 
-
|<bbpart>BBa_I0500</bbpart> in <bbpart>J61002</bbpart>
 
-
|construct with pBad promotor regulating expression of mRFP <partinfo>I0500 SpecifiedComponents</partinfo>
 
-
|L1".1, L1".2
 
-
| [[Paris/August 14| August 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |
 
-
|AttB
 
-
|
 
-
|MP15
 
-
| [[Paris/August 14| August 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |
 
-
|AttP
 
-
|Finished
 
-
|MP16
 
-
| [[Paris/July 25| July 25]], [[Paris/July 27| July 27]], [[Paris/August 7| Aug 7]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L2
 
-
|Lox66DapAE.coli in <bbpart>pSB1A2</bbpart>
 
-
|Insertion of lox66DapAE.coli construct as a biobrick in pSB1A2 plasmid
 
-
http://parts.mit.edu/registry/images/9/9f/Part_icon_dna.png
 
-
http://parts.mit.edu/registry/images/7/7b/Part_icon_cds.png
 
-
|
 
-
| [[Paris/July 25| July 25]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L6
 
-
|<bbpart>BBa_B0030</bbpart>+<bbpart>BBa_J61047</bbpart>
 
-
|strong RBS(B0030)-Cre ORF
 
-
http://parts.mit.edu/r/parts/images/partbypart/icon_rbs.png
 
-
http://parts.mit.edu/registry/images/7/7b/Part_icon_cds.png
 
-
|L6.1, L6.2, L6.3, L6".1, L6".2
 
-
| [[Paris/July 25| July 25]], [[Paris/July 27| July 27]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L9''
 
-
|lox66 in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|
 
-
|[[Paris/July 25| July 25]], [[Paris/July 30| July 30]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L10''
 
-
|lox71 in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|
 
-
|[[Paris/July 25| July 25]], [[Paris/July 30| July 30]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L12
 
-
|lox71-gfp in pSB1A2
 
-
|construction of the biobrick lox71-gfp
 
-
http://parts.mit.edu/registry/images/9/9f/Part_icon_dna.png
 
-
http://parts.mit.edu/r/parts/images/partbypart/icon_reporter.png
 
-
|L12.1 & L12.2
 
-
|[[Paris/July 30| July 30]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L26
 
-
|araC/pbad>>RBS-Cre in <bbpart>J61002</bbpart>
 
-
|ligation ([[Paris/August 13| Aug.13]]) of RBS-Cre as a CDS behind pbad in <bbpart>J61002</bbpart>
 
-
|L26.1 (no more) & L26.2
 
-
|[[Paris/August 17| Aug. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L29
 
-
|gfptripart-lox66 <bbpart>pSB1A2</bbpart>
 
-
|ligation ([[Paris/August 13| Aug.13]]) of gfp-tripart in front of lox66
 
-
|L29.1 & L29.2
 
-
|[[Paris/August 17| Aug. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L30
 
-
|dapAp>>mRFP in <bbpart>J61002</bbpart>
 
-
|dapAp promotor placed([[Paris/August 13| Aug.13]]) upstream of mRFP <bbpart>J61002</bbpart>
 
-
|L30A1 & L30A2
 
-
|[[Paris/August 17| Aug. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L31
 
-
|lox71-<bbpart>B0015</bbpart>(T) in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L31.1 & L31.3
 
-
|[[Paris/August 20| Aug. 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L32
 
-
|<bbpart>B0015</bbpart>(T)-lox66 in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L32.1 & L32.2
 
-
|[[Paris/August 20| Aug. 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L34
 
-
|pTet>>lox71-gfptripart in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L34.1 & L34.2
 
-
|[[Paris/August 20| Aug. 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L35
 
-
|araC/pBad>>lox71-gfptripart in <bbpart>pSB1A2</bbpart>
 
-
|il manque la seq. de 740-1410
 
-
|L35.1 & L35.2
 
-
|[[Paris/August 20| Aug. 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L36
 
-
|lox66-mRFP
 
-
|
 
-
|L36.1 & L36.2
 
-
|[[Paris/August 20| Aug. 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L37
 
-
|lox66-RBS-dapAcoli
 
-
|
 
-
|L37.1 & L37.2
 
-
|[[Paris/August 20| Aug. 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L39
 
-
|RBS-dapAcoli cloned in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L39.1 & L39.2
 
-
|[[Paris/August 20| Aug. 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L46
 
-
|pTet>>lox71-B0015(T) in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L46.1
 
-
|[[Paris/September 18| Sep. 18]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L53
 
-
|B0015(T)-lox66-RBSDapAcoli in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L53.7
 
-
|[[Paris/September 18| Sep. 18]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L56
 
-
|B0015(T)-lox66-RBSdapAsubtilis in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L56.3 (attention, seq a partiellement foiré, refaire seq)
 
-
|[[Paris/September 18| Sep. 18]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L59
 
-
|pTet>>lox71-gfptripart-lox66-mRFP <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L59.6 (attention, seq avec O40 a foiré, mais les extrémités sont bonnes, je pense que c ok car les colonies sont vertes)
 
-
|[[Paris/September 18| Sep. 18]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |L64
 
-
|RBSdapAsubtilis cloned in <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|L564.1 & L64.2
 
-
|[[Paris/September 18| Sep. 18]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MPT1
 
-
|Lox66-DapAColi
 
-
|pTOPO P5
 
-
|MPT1.1, MPT1.2
 
-
|[[Paris/August 7| Aug 7]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MPT3
 
-
|Lox66-DapASubtilis
 
-
|pTOPO P6
 
-
|MPT3.2, MPT3.1
 
-
|[[Paris/August 7| Aug 7]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MPT4
 
-
|RBS-DapAColi
 
-
|pTOPO P8
 
-
|MPT4.1, .2, .3, .4& .5
 
-
|[[Paris/August 7| Aug 7]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MPT5
 
-
|RBS-DapASubtilis
 
-
|pTOPO P9
 
-
|MPT5.1, .2 &.3
 
-
|[[Paris/August 7| Aug 7]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |MP15
 
-
|pKD46
 
-
|
 
-
|
 
-
|[[Paris/October 2| Oct 2]]
 
|}
|}
Line 316: Line 58:
|width=5%| []ng/µL
|width=5%| []ng/µL
|width=5%| Date
|width=5%| Date
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D1
 
-
|<bbpart>pJ23100</bbpart>
 
-
|<bbpart>pJ23100</bbpart>
 
-
|Spe1
 
-
|Pst1
 
-
|2096
 
-
|Vector with the J23100 promoter ready for insertion of a RBS/CDS insert
 
-
|Ø (24/09/07)
 
-
|34
 
-
|[[Paris/July 17| July 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D2
 
-
|<bbpart>mRFP dblTer</bbpart>
 
-
|<bbpart>pJ23100</bbpart>
 
-
|Spe1
 
-
|Pst1
 
-
|887
 
-
|
 
-
|
 
-
|27
 
-
|[[Paris/July 17| July 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D3
 
-
|<bbpart>pJ23107</bbpart>
 
-
|<bbpart>pJ23107</bbpart>
 
-
|Spe1
 
-
|Pst1
 
-
|2096
 
-
|Vector with the J23107 promoter ready for insertion of a RBS/CDS insert
 
-
|Ø (24/09/07)
 
-
|32
 
-
|[[Paris/July 17| July 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D4
 
-
|<bbpart>mRFP dblTer</bbpart>
 
-
|<bbpart>pJ23107</bbpart>
 
-
|Spe1
 
-
|Pst1
 
-
|887
 
-
|
 
-
|
 
-
|25
 
-
|[[Paris/July 17| July 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D5
 
-
|<bbpart>pJ23100</bbpart>
 
-
|<bbpart>pJ23100</bbpart>
 
-
|EcoR1
 
-
|Spe1
 
-
|2925
 
-
|The vector with the mRFP gene ready for insertion of a promoter. We are not sure the digestion worked properly.
 
-
|
 
-
|28&29
 
-
|[[Paris/July 17| July 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D6
 
-
|<bbpart>pJ23107</bbpart>
 
-
|<bbpart>pJ23107</bbpart>
 
-
|EcoR1
 
-
|Spe1
 
-
|2925
 
-
|The vector with the mRFP gene ready for insertion of a promoter. We are not sure the digestion worked properly.
 
-
|
 
-
|31&27
 
-
|[[Paris/July 17| July 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D7
 
-
|Lox66 DapA E.coli
 
-
|Lox66 DapA E.coli (PCR product)
 
-
|EcoR1
 
-
|Pst1
 
-
|977
 
-
|
 
-
|
 
-
|24
 
-
|[[Paris/July 17| July 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D8
 
-
|Lox66 DapA E.coli
 
-
|Lox66 DapA E.coli (PCR product)
 
-
|Xba1
 
-
|Pst1
 
-
|962
 
-
|
 
-
|
 
-
|44
 
-
|[[Paris/July 17| July 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D9
 
-
|<bbpart>pJ23100</bbpart> ES vector
 
-
|<bbpart>pJ23100</bbpart> (MP1.1 & MP1.2)
 
-
|EcoI
 
-
|SpeI
 
-
|2925
 
-
|Vector with mRFP RBS/CDS ready for insertion promoter (fw-insert)
 
-
|
 
-
|80&43
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D10
 
-
|<bbpart>pJ23100</bbpart> promoter fw-insert
 
-
|<bbpart>pJ23100</bbpart> (MP1.1 & MP1.2)
 
-
|EcoI
 
-
|SpeI
 
-
|58
 
-
|J23100 promoter ready for use as a fw-insert
 
-
|
 
-
|35&28
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D11
 
-
|<bbpart>pJ23107</bbpart> ES vector
 
-
|<bbpart>pJ23107</bbpart> (MP2.1, MP2.2, MP2.3 & MP2.4)
 
-
|EcoRI
 
-
|SpeI
 
-
|2925
 
-
|Vector with mRFP RBS/CDS ready for insertion of a fw-insert promoter
 
-
|
 
-
|49,35,28&41
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D12
 
-
|<bbpart>pJ23107</bbpart> promoter fw-insert
 
-
|<bbpart>pJ23107</bbpart> (MP2.1, MP2.2, MP2.3 & MP2.4)
 
-
|EcoRI
 
-
|SpeI
 
-
|58
 
-
|J23107 promoter ready for usage as a fw-insert
 
-
|
 
-
|23,25,32&32
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D13
 
-
|<bbpart>mRFP</bbpart>
 
-
|<bbpart>pJ23107</bbpart> (MP2.2, MP2.3 & MP2.4)
 
-
|SpeI
 
-
|PstI
 
-
|887
 
-
|mRFP RBS/CDS/T sequence, can it be used as a backward insert? => yes but you will not be able to add any biobrick after it
 
-
|
 
-
|21&41
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D14
 
-
|Cre ORF
 
-
|<bbpart>J61047</bbpart> MP9.1 & MP9.2
 
-
|XbaI
 
-
|PstI
 
-
|1063
 
-
|Cre ORF extracted for usage as a bw-insert
 
-
|Ø D14.1
 
-
|38&41
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D15
 
-
|<bbpart>B0030</bbpart> bw-vector
 
-
|<bbpart>B0030</bbpart> MP5.1 & MP5.2
 
-
|SpeI
 
-
|PstI
 
-
|2076
 
-
|bacward vector for cloning a CDS bw-insert after the B0030 RBS
 
-
|
 
-
|87&42
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D18
 
-
|BB dig. lox66DapAE.coli
 
-
|lox66-DapAE.coli P5 PCR product
 
-
|EcoRI
 
-
|PstI
 
-
|~960
 
-
|PCR product digested for cloning as a BioBrick
 
-
 
-
|44
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D19
 
-
|BB dig. lox66DapAsubtilis
 
-
|lox66-DapAsubtilis P6 PCR product
 
-
|EcoRI
 
-
|PstI
 
-
|~960
 
-
|PCR product digested for cloning as a BioBrick
 
-
 
-
|
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D19'
 
-
|BB dig. lox66DapAsubtilis
 
-
|lox66-DapAsubtilis P6' PCR product
 
-
|EcoRI
 
-
|PstI
 
-
|~960
 
-
|PCR product digested for cloning as a BioBrick
 
-
|
 
-
|16
 
-
|[[Paris/July 30| July 30]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D20
 
-
|bw-insert lox66-DapAE.coli
 
-
|lox66-DapAE.coli P5 PCR product
 
-
|XbaI
 
-
|PstI
 
-
|~960
 
-
|PCR product digested for usage as a backward insert
 
-
 
-
|
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D21
 
-
|bw-insert lox66-DapAsubtilis
 
-
|lox66-DapAsubtilis P6 PCR product
 
-
|XbaI
 
-
|PstI
 
-
|~960
 
-
|PCR product digested for usage as a backward insert
 
-
 
-
|
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D21'
 
-
|bw-insert lox66-DapAsubtilis
 
-
|lox66-DapAsubtilis P6' PCR product
 
-
|XbaI
 
-
|PstI
 
-
|~960
 
-
|PCR product digested for cloning as a BI
 
-
|
 
-
|34
 
-
|[[Paris/July 30| July 30]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D22
 
-
|pSB1A2 open vector
 
-
|<bbpart>BBa_J61047</bbpart> (MP9.1 & MP9.2)
 
-
|EcoI
 
-
|PstI
 
-
|Ø D22.1
 
-
|Open pSB1A2 vector for BioBrick EcoRI/PstI insertio
 
-
|Ø (24/09/07)
 
-
|D22.2:59
 
-
|[[Paris/July 23| July 23]],[[Paris/August 13 | Aug. 13 ]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D23
 
-
|AraC/pBad promoter fw-insert
 
-
|<bbpart>BBa_I0500</bbpart> (MP4.1 & MP4.2)
 
-
|EcoI
 
-
|SpeI
 
-
|1233
 
-
|AraC/pBad promoter ready for use as a forward insert
 
-
|Ø D23.1
 
-
|93&53
 
-
|[[Paris/July 23| July 23]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D24
 
-
|eCFP bw-insert
 
-
|<bbpart>BBa_E0422</bbpart> (MP6.1 & MP6.2)
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|eCFP (RBS-OFR_LVA-T) ready for use as a backward insert
 
-
|
 
-
|56&55
 
-
|[[Paris/July 23| July 23]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D26
 
-
|gfp-tripart
 
-
|<bbpart>BBa_E0840</bbpart> (MP8.1 & MP8.2)
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|gfp-tri part (strongRBS-ORF-T) ready for use as a backward insert
 
-
|
 
-
|47&47
 
-
|[[Paris/July 23| July 23]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D27
 
-
|lox71-ftsZ bw-insert
 
-
|lox71-ftsZ PCR product P7
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|lox71-ftsZ(unmutated) ready for use as a backward insert
 
-
 
-
|
 
-
|[[Paris/July 23| July 23]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D27'
 
-
|lox71-ftsZ bw-insert
 
-
|lox71-ftsZ PCR product P7
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|lox71-ftsZ(unmutated) ready for use as a backward insert
 
-
|
 
-
|24
 
-
|[[Paris/July 30| July 30]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D28
 
-
|RBS-DapAColi BB
 
-
|P8 (RBS-DapAColi)
 
-
|EcoRI
 
-
|PstI
 
-
|~950
 
-
|Biobrick
 
-
|
 
-
|54
 
-
|[[Paris/July 25| July 25]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D29
 
-
|RBS-DapAColi
 
-
|P8 (RBS-DapAColi)
 
-
|XbaI
 
-
|PstI
 
-
|~950
 
-
|Backward insert
 
-
|
 
-
|44
 
-
|[[Paris/July 25| July 25]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D30
 
-
|RBS-DapASubtilis BB
 
-
|P9 (RBS-DapASubtilis)
 
-
|EcoRI
 
-
|PstI
 
-
|~950
 
-
|Biobrick
 
-
|
 
-
|72
 
-
|[[Paris/July 25| July 25]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D31
 
-
|RBS-DapASubtilis
 
-
|P9 (RBS-DapASubtilis)
 
-
|XbaI
 
-
|PstI
 
-
|~950
 
-
|Backward insert
 
-
|
 
-
|51
 
-
|[[Paris/July 25| July 25]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D32
 
-
|Lox71-FtsA-FtsZ
 
-
|P10 Lox71-FtsA-FtsZ
 
-
|XbaI
 
-
|PstI
 
-
|~2600
 
-
|Backward insert - EcoRI site still presents : we can't use EcoRI
 
-
|
 
-
|47
 
-
|[[Paris/July 25| July 25]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D33
 
-
|RBS(B0030)CreORF
 
-
|L6' (clone 1 & 2)
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|RBS-Cre digestion for use as a BI
 
-
|
 
-
|29&27
 
-
|[[Paris/July 30| July 30]],[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D34
 
-
|lox66
 
-
|L9' lox66
 
-
|SpeI
 
-
|PstI
 
-
|
 
-
|Biobrick plasmid carrying lox66 digested as a BV
 
-
|
 
-
|18
 
-
|[[Paris/July 30| July 30]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D35
 
-
|lox71
 
-
|L10' lox71
 
-
|SpeI
 
-
|PstI
 
-
|
 
-
|Biobrick plasmid carrying lox71 digested as a BV
 
-
|
 
-
|
 
-
|[[Paris/July 30| July 30]],[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D36
 
-
|lox71-KmR-lox66
 
-
|P11 lox71-KmR-lox66
 
-
|EcoRI
 
-
|PstI
 
-
|
 
-
|lox71-KmR-lox66 digested as a biobrick insert
 
-
|
 
-
|
 
-
|[[Paris/July 30| July 30]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D37
 
-
|lox71-gfp(tripart) BI
 
-
|L12.1 & L12.2 miniprep products (from [[Paris/July 30| 30/07]] ligation reaction)
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|lox71_RBS-gfp-double terminator extracted as a backward insert
 
-
|
 
-
|
 
-
|[[Paris/August 6 | Aug. 6 ]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D38
 
-
|BB-insert lox66-DapAE.coli
 
-
|lox66-DapAE.coli in pTOPO (P5 PCR product)(clones 1+2)
 
-
|EcoRI
 
-
|PstI
 
-
|
 
-
|lox66-dapAE.coli extracted from pTOPO plasmid as a BB insert
 
-
|
 
-
|
 
-
|[[Paris/August 6| Aug. 6]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D39'
 
-
|BI-insert lox66-DapAE.coli
 
-
|lox66-DapAE.coli in pTOPO (P5 PCR product)(clones 1+2)
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|lox66-dapAcoli extracted for usage as a backward insert
 
-
|
 
-
|
 
-
|[[Paris/August 7 | Aug. 7 ]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D40
 
-
|BB-insert lox71-KmR-lox66
 
-
|L25.1 miniprep product (from ligation rxn of [[Paris/July 30| 30/07]]
 
-
|EcoRI
 
-
|PstI
 
-
|
 
-
|lox71-KmR-lox66 construct extracted for clonong as a biobrick
 
-
|
 
-
|
 
-
|[[Paris/August 6 | Aug. 6 ]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D41
 
-
|araC/pBad-J61002 plasmid SP dig.
 
-
|L1.2, L1".1 & L1".2 miniprep product
 
-
|SpeI
 
-
|PstI
 
-
|
 
-
|J61002 plasmid containing araC/pBad promotor digested for insertion of a BI CDS
 
-
|
 
-
|
 
-
|[[Paris/August 13 | Aug. 13 ]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D42
 
-
|Lox66 FV
 
-
|L9
 
-
|EcoRI
 
-
|XbaI
 
-
|
 
-
|pSB1A2-lox66 as a Forward vector
 
-
|
 
-
|
 
-
|[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D43
 
-
|gfp-tripart FI
 
-
|MP8.1
 
-
|EcoRI
 
-
|SpeI
 
-
|
 
-
|gfp-tri part (strongRBS-ORF-T) ready for use as a forward insert
 
-
|
 
-
|
 
-
|[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D44
 
-
|<bbpart>B0015</bbpart> terminator BI
 
-
|<bbpart>B0015</bbpart> in <bbpart>pSB1AK3</bbpart> (MP3.3 Aug.14)
 
-
|XbaI
 
-
|Pst1
 
-
|
 
-
|terminator B0015 extracted for use as a BI
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D45
 
-
|<bbpart>B0015</bbpart> terminator FI
 
-
|<bbpart>B0015</bbpart> in <bbpart>pSB1AK3</bbpart> (MP3.4 Aug.14)
 
-
|EcoRI
 
-
|SpeI
 
-
|
 
-
|terminator B0015 extracted for use as a FI
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D46
 
-
|<bbpart>B0015</bbpart> BV
 
-
|<bbpart>B0015</bbpart> in <bbpart>pSB1AK3</bbpart> (MP3.3 Aug.14)
 
-
|SpeI
 
-
|Pst1
 
-
|
 
-
|<bbpart>B0015</bbpart> in <bbpart>pSB1AK3</bbpart> plasmid extracted for use as a BV
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D47
 
-
|<bbpart>pSB1A2</bbpart> XP dig.
 
-
|<bbpart>pSB1A2</bbpart> carrying Cre ORF (MP9.1)
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|<bbpart>pSB1A2</bbpart> open vector ready for cloning of BI
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D48
 
-
|<bbpart>pSB1A2</bbpart> ES dig.
 
-
|<bbpart>pSB1A2</bbpart> carrying Cre ORF (MP9.2)
 
-
|EcoRI
 
-
|SpeI
 
-
|
 
-
|<bbpart>pSB1A2</bbpart> open vector ready for cloning of FI
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D49
 
-
|lox71-gfptripart BI
 
-
|lox71-gfptripart in <bbpart>pSB1A2</bbpart> (L12.2)
 
-
|XbaI
 
-
|Pst1
 
-
|
 
-
|lox71-gfptripart extracted for use as a BI
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D50
 
-
|<bbpart>BBa_J61002</bbpart> pTet SP dig.
 
-
|<bbpart>BBa_J61002</bbpart> (MP13.1 [[Paris/August 14| Aug. 14]])
 
-
|SpeI
 
-
|PstI
 
-
|
 
-
|<bbpart>BBa_J61002</bbpart> pTet promoter vector ready for insertion of CDS as a BI
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D51
 
-
|RBS-dapAcoli BBinsert
 
-
|pTOPO of RBS-dapAcoli (MPT4.3)
 
-
|EcoRI
 
-
|Pst1
 
-
|
 
-
|RBS-dapAcoli extracted for cloning as a biobrick
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D52
 
-
|RBS-dapAcoli BI
 
-
|pTOPO of RBS-dapAcoli (MPT4.3)
 
-
|XbaI
 
-
|Pst1
 
-
|
 
-
|RBS-dapAcoli extracted for use as a BI
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D53
 
-
|RBS-dapAsubtilis BBinsert
 
-
|pTOPO of RBS-dapAsubtilis (MPT5.1)
 
-
|EcoRI
 
-
|Pst1
 
-
|
 
-
|RBS-dapAsubtilis extracted for cloning as a biobrick
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D54
 
-
|RBS-dapAsubtilis BI
 
-
|pTOPO of RBS-dapAsubtilis (MPT5.1)
 
-
|XbaI
 
-
|Pst1
 
-
|
 
-
|RBS-dapAsubtilis extracted for use as a BI
 
-
|Ø (24/09/07)
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D55
 
-
|RBS-dapAsubtilis FI
 
-
|pTOPO of RBS-dapAsubtilis (MPT5.2)
 
-
|EcoRI
 
-
|SpeI
 
-
|
 
-
|RBS-dapAsubtilis extracted for use as a FI
 
-
|
 
-
|
 
-
|[[Paris/August 16| August 16]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D57
 
-
|lox71-B0015(T) BI
 
-
|(L31.1, L31.3) lox71-B0015(T) <bbpart>pSB1A2</bbpart>
 
-
|XbaI
 
-
|Pst1
 
-
|
 
-
|lox71-B0015(T) extracted for use as a BI <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D58
 
-
|B0015(T)-lox66 BV
 
-
|(L32.1, L32.2) B0015(T)-lox66 BV
 
-
|SpeI
 
-
|PstI
 
-
|
 
-
|B0015(T)-lox66 for use as a BV <bbpart>pSB1A2</bbpart>
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D59
 
-
|pTet>>lox71-gfptripart BI
 
-
|(L34.1, L34.2) pTet>>lox71-gfptripart <bbpart>BBa_J61002</bbpart>
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|pTet>>lox71-gfptripart for use as a BI
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;"  |D61
 
-
|lox66-mRFP FV
 
-
|(L36.1, L36.2) lox66-mRFP
 
-
|EcoRI
 
-
|XbaI
 
-
|
 
-
|lox66-mRFP part (strongRBS-ORF-T) ready for use as a forward vector
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D62
 
-
|lox66-RBSDapAcoli BI
 
-
|(L37.1, L37.2) lox66-RBSDapAcoli
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|lox66-RBSDapAcoli ready for use as a Backward insert
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D63
 
-
|RBSDapAcoli BI
 
-
|(L39.1, L39.2) RBSDapAcoli
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|RBSDapAcoli BI (for insertion behind T-lox66)
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D64
 
-
|FRT-CmR-FRT <bbpart>BBa_J61025</bbpart> BV
 
-
|(MP14.1) <bbpart>BBa_J61025</bbpart>
 
-
|SpeI
 
-
|PstI
 
-
|
 
-
|FRT-CmR-FRT <bbpart>BBa_J61025</bbpart> (for backward introduction of a casette for Wanner K insertion)
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D65
 
-
|FRT-CmR-FRT <bbpart>BBa_J61025</bbpart> FV
 
-
|(MP14.1) <bbpart>BBa_J61025</bbpart>
 
-
|EcoR
 
-
|XbaI
 
-
|
 
-
|FRT-CmR-FRT <bbpart>BBa_J61025</bbpart> (for forward introduction of a casette for Wanner K insertion)
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D68
 
-
|attB BV
 
-
|(MP15.1)
 
-
|SpeI
 
-
|PstI
 
-
|
 
-
|vector containing attB for use as a BV
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D69
 
-
|gfptripart-lox66 BV
 
-
|(L29.1) gfptripart-lox66 <bbpart>pSB1A2</bbpart>
 
-
|SpeI
 
-
|PstI
 
-
|
 
-
|
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D70
 
-
|pTet>>lox71-gfptripart FI
 
-
|(L34.1, L34.2) pTet>>lox71-gfptripart <bbpart>BBa_J61002</bbpart>
 
-
|EcoRI
 
-
|SpeI
 
-
|
 
-
|pTet>>lox71-gfptripart for use as a FI
 
-
|
 
-
|
 
-
|[[Paris/September 14| Sep. 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D71
 
-
|araC/pBad>>lox71-gfptripart FI
 
-
|L35.1 araC/pBad>>lox71-gfptripart <bbpart>BBa_J61002</bbpart>
 
-
|EcoRI
 
-
|SpeI
 
-
|
 
-
|araC/pBad>>lox71-gfptripart for use as a FI
 
-
|Ø (24/09/07)
 
-
|
 
-
|[[Paris/September 14| Sep. 14]][[Paris/September 17| Sep. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D72
 
-
|<bbpart>pSB2K3</bbpart> BBvector
 
-
|MP16 <bbpart>pSB2K3</bbpart>::attP
 
-
|EcoRI
 
-
|PstI
 
-
|
 
-
|Low copy number plasmid, BB vector
 
-
|
 
-
|
 
-
|[[Paris/September 17| Sep. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D73
 
-
|<bbpart>pSB2K3</bbpart> ES open vector
 
-
|MP16 <bbpart>pSB2K3</bbpart>::attP
 
-
|EcoRI
 
-
|SpeI
 
-
|
 
-
|Comparison of digestion efficiency between Pst and Spe in NEB2
 
-
|
 
-
|
 
-
|[[Paris/September 17| Sep. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D76
 
-
|DGAT BB
 
-
|P14 DGAT
 
-
|EcoRI
 
-
|PstI
 
-
|
 
-
|DGAT
 
-
|Ø (24/09/07)
 
-
|
 
-
|[[Paris/September 17| Sep. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D77
 
-
|araC/pBad>>lox71-gfptripart BI
 
-
|D60 (.1 & .2) digestion product
 
-
|FspI
 
-
|AhdI
 
-
|
 
-
|in D60, the extracted fragment & the open plasmid have the same size, it is thus necessary to remove the plasmid by digestion
 
-
|
 
-
|
 
-
|[[Paris/September 17| Sep. 17]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;"  |D78
 
-
|araC/pBad>>lox71-gfptripart FI
 
-
|D71 (.1 & .2) digestion product
 
-
|FspI
 
-
|AhdI
 
-
|
 
-
|in D71, the extracted fragment & the open plasmid have the same size, it is thus necessary to remove the plasmid by digestion
 
-
|
 
-
|
 
-
|[[Paris/September 17| Sep. 17]]
 
|}
|}
Line 1,122: Line 72:
|width=55%| Description
|width=55%| Description
|width=5%| Date
|width=5%| Date
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D16
 
-
|<bbpart>pSB1AK3</bbpart>::<bbpart>B0015</bbpart> (MP3.1 & MP3.2)
 
-
|EcoR1
 
-
|Pst1
 
-
|~3000
 
-
|We have one band at ~2000. Furthermore, the strain which is suppose to be resistant to Kanamycin is not. We suspect that the part is in the pSB1A2 instead of the pSB1AK3
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D17
 
-
|<bbpart>pSB1A2</bbpart>::<bbpart>E0422</bbpart> (MP6.1 & MP6.2)
 
-
|EcoRI
 
-
|PstI
 
-
|~2040 + ~920
 
-
|3 bands
 
-
|[[Paris/July 21| July 21]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |D25
 
-
|<bbpart>BBa_E0421</bbpart> (MP7.1 & MP7.2) PoPs to GFP converter
 
-
|XbaI
 
-
|PstI
 
-
|
 
-
|
 
-
|[[Paris/July 23| July 23]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #FF99FF;" |D66
 
-
|(MP12.1, MP12.2) <bbpart>BBa_P1003</bbpart> in <bbpart>pSB1A2</bbpart>
 
-
|EcoR
 
-
|XbaI
 
-
|
 
-
|KanR <bbpart>BBa_J61025</bbpart> FV (for forward introduction of a casette for Wanner K insertion). The strange thing is that this digestion produces 2 visible products: ~1000 bp & ~2500 bp!!!
 
-
|[[Paris/September 17| Sep.17]], [[Paris/September 27| Sep.27]]
 
|}
|}
Line 1,166: Line 84:
|width=5%| Verified clone
|width=5%| Verified clone
|width=5%| Date
|width=5%| Date
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S1
 
-
|MG1655
 
-
|Standard E.Coli strain
 
-
|
 
-
|
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S2
 
-
|Acinetobacter ADP1
 
-
|Strain used for TG coloration test with Red Nile
 
-
|
 
-
|
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S3
 
-
|DH5alpha pKs::DGAT
 
-
|Enzyme catalysing the transormation of DAG into TG
 
-
|
 
-
|
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S4
 
-
|<bbpart>BBa_pJ23100</bbpart>
 
-
|Strong constitutive promoter in J61002 (clones 1 + 2) <partinfo>pJ23100 SpecifiedComponents</partinfo>
 
-
|
 
-
|
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S5
 
-
|<bbpart>BBa_B0015</bbpart>
 
-
|Double terminator (clones 1 + 2)    <partinfo>B0015 SpecifiedComponents</partinfo>
 
-
|
 
-
|
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S6
 
-
|<bbpart>BBa_pJ23107</bbpart>
 
-
|Medium constitutive promoter in J61002 (clones 1 + 2) <partinfo>pJ23107 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 19| July 19]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S7
 
-
|<bbpart>BBa_B0030</bbpart>
 
-
|Strong RBS (clones 1 + 2) <partinfo>B0030 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 19| July 19]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S8
 
-
|<bbpart>BBa_E0422</bbpart>
 
-
|ECFP (RBS+LVA+Term) (clones 1 + 2) <partinfo>E0422 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 19| July 19]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S9
 
-
|<bbpart>BBa_E0241</bbpart>
 
-
|PoPs to GFP converter (clones 1 + 2) <partinfo>E0241 DeepComponents</partinfo>
 
-
|
 
-
|[[Paris/July 19| July 19]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S10
 
-
|<bbpart>BBa_E0840</bbpart>
 
-
|gfp tri-part; strong rbs (clones 1 + 2) <partinfo>E0840 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 19| July 19]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S11
 
-
|<bbpart>BBa_J61047</bbpart>
 
-
|Cre ORF (clones 1 + 2) <partinfo>J61047 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 19| July 19]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S12
 
-
|W121
 
-
|
 
-
|
 
-
|05/07/07
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S13
 
-
|<bbpart>BBa_I0500</bbpart>
 
-
|pBAD AraC (clone 1+2) <partinfo>I0500 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 20| July 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S14
 
-
|<bbpart>BBa_pJ23107</bbpart>
 
-
|Medium constitutive promoter in J61002 (clone 3+4) <partinfo>pJ23107 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 20| July 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S15
 
-
|<bbpart>BBa_P1003</bbpart>
 
-
|Kanamycin resistance cassette (clone 1+2) <partinfo>P1003 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 20| July 20]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S16
 
-
|<bbpart>J61002</bbpart>::<bbpart>I0500</bbpart>
 
-
|AraC pBad regulating mRFP expression in pJ61002 (L1) <partinfo>J61002 SpecifiedComponents</partinfo>
 
-
|L1.2, L1.3
 
-
|[[Paris/July 27| July 27]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S17
 
-
|<bbpart>pSB1A2</bbpart>::Lox66-DapA Coli
 
-
|Lox66-DapA Coli cloned as a biobrick (L2)
 
-
|
 
-
|[[Paris/July 27| July 27]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S18
 
-
|<bbpart>pSB1A2</bbpart>::B0030 + J61047
 
-
|RBS(B0030)-Cre ORF (L6) (clones 1+2)
 
-
|
 
-
|[[Paris/July 27| July 27]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S19
 
-
|<bbpart>pSB1A2</bbpart>::<bbpart>BBa_J37026</bbpart>
 
-
|Lox66 (L9)(1 clone) <partinfo>J37026 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 27| July 27]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S20
 
-
|<bbpart>pSB1A2</bbpart>::<bbpart>BBa_J37028</bbpart>
 
-
|Lox71 (L10)(1 clone) <partinfo>J37028 SpecifiedComponents</partinfo>
 
-
|
 
-
|[[Paris/July 27| July 27]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S21
 
-
|<bbpart>pSB1A2</bbpart>::<bbpart>BBa_J37028</bbpart>+<bbpart>BBa_E0840</bbpart>
 
-
|Lox71-gfp tri-part (L12)
 
-
|L12.2 ok
 
-
|?
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S22
 
-
|<bbpart>pSB1A2</bbpart>::Lox71-kmR-lox66
 
-
|Lox71-kmR-lox66 (L25)
 
-
|sequence not good (thrown away)
 
-
|?
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S23
 
-
|pTopo::P5
 
-
|Lox66-DapAColi
 
-
|
 
-
|?
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S24
 
-
|pTopo::P6
 
-
|Lox66-DapASubtilis
 
-
|
 
-
|?
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S25
 
-
|pTopo::P8
 
-
|RBS-DapAColi
 
-
|MPT4.3, MPT4.5
 
-
|?
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S26
 
-
|pTopo::P9
 
-
|RBS-DapASubtilis
 
-
|
 
-
|?
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S27
 
-
|<bbpart>J61002</bbpart>
 
-
|
 
-
|
 
-
|[[Paris/August 14| August 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S28
 
-
|<bbpart>J61025</bbpart>
 
-
|FRT-Cm-FRT
 
-
|
 
-
|[[Paris/August 14| August 14]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S29
 
-
|L26
 
-
|Insertion of RBS-Cre behind araC/pBad
 
-
|
 
-
|[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S30
 
-
|L27
 
-
|Insertion of ftsZ behind araC/pBad
 
-
|
 
-
|[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S31
 
-
|L28
 
-
|Insertion of ftsAZ behind araC/pBad
 
-
|
 
-
|[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S32
 
-
|L29
 
-
|Insertion of gfp-tripart in front of lox66
 
-
|
 
-
|[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S33A
 
-
|L30A
 
-
|cloning dapAp promotor in J61002
 
-
|
 
-
|[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S33B
 
-
|L30B
 
-
|cloning dapAp promotor in J61002
 
-
|
 
-
|[[Paris/August 13| August 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S34
 
-
|L31
 
-
|Insertion of B0015 terminator behind lox71
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S35
 
-
|L32
 
-
|Insertion of B0015 terminator in front of lox66
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S36
 
-
|L34
 
-
|pTet>>lox71-gfptripart
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S37
 
-
|L35
 
-
|araC/pBad>>lox71-gfptripart
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S38
 
-
|L36
 
-
|lox66-mRFP
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S39
 
-
|L37
 
-
|lox66-RBS-dapAcoli BI
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S40
 
-
|L39
 
-
|RBS-dapAcoli cloned in pSB1A2
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S41
 
-
|L40
 
-
|RBS-dapAsubtilis cloned in pSB1A2
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S42
 
-
|L41
 
-
|lox71-ftsZ cloned in pSB1A2
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S43
 
-
|L42
 
-
|lox71-ftsA-Z cloned in pSB1A2
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S44
 
-
|L43
 
-
|RBS-dapAsubtilis cloned in pSB1A2
 
-
|
 
-
|[[Paris/August 22| August 22]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S45A
 
-
|L30A
 
-
|DapAp>>mRFP within W121 strain
 
-
|
 
-
|[[Paris/August 25| August 25]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S45B
 
-
|L30B
 
-
|DapAp>>mRFP within W121 strain
 
-
|
 
-
|[[Paris/August 25| August 25]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S48
 
-
|pKD13
 
-
|FRT-KanR-FRT; Wanner plasmid
 
-
|
 
-
|[[Paris/September 18| Sep. 18]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S49
 
-
|pKD46
 
-
|Red recombination system; Wanner plasmid
 
-
|
 
-
|[[Paris/September_13| Sep. 13]]
 
-
|- style="background: #cccccc;"
 
-
| style="background: #ccffcc;" |S50
 
-
|L30 plasmid in FR781
 
-
|dapAp>>mRFP plasmid
 
-
|
 
-
|[[Paris/September_28| Sep. 28]]
 
|}
|}

Revision as of 11:49, 17 July 2009

Contents

PCR products

PCR products
Number Name Oligo F Oligo R Matrix Length Comments Product Left ? []ng/µL Date

http://parts.mit.edu/r/parts/images/partbypart/icon_terminator.png http://parts.mit.edu/images/partbypart/icon_regulatory.png http://parts.mit.edu/r/parts/images/partbypart/icon_rbs.png http://parts.mit.edu/r/parts/images/partbypart/icon_reporter.png http://parts.mit.edu/registry/images/7/7b/Part_icon_cds.png http://parts.mit.edu/registry/images/9/9f/Part_icon_dna.png http://parts.mit.edu/registry/images/2/2e/Part_icon_generator.png http://parts.mit.edu/registry/images/a/ab/Part_icon_plasmid.png

Plasmids: MiniPrep Products

Plasmids: MiniPrep Products
Number Name Description Products in use Date

Digestion Products


PURPLE = Vector
GREEN = Insert

Digestion Products
Number Product Name Matrix Name Enzyme 1 Enzyme 2 Size Description Product Left []ng/µL Date

Unexpected digestion results

Unexpected results
Number Matrix Name Enzyme 1 Enzyme 2 Expected Size Description Date

Strains (glycerol stock)

Strains glycerol stock
Number Name Description Verified clone Date