Team:Paris/Transduction testing fusion

From 2009.igem.org

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== Fusion ==
== Fusion ==
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Fusion : the construction required for the fusion of the vesicles that contain the message.  
Fusion : the construction required for the fusion of the vesicles that contain the message.  
G3P , OmpAL , Jun, Fos , and AIDA protein.
G3P , OmpAL , Jun, Fos , and AIDA protein.
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[[Image:Paris_construc_7_aida.jpg |700px|center|plasmid = ]]
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[[Image:Paris_construc_8_junfos.jpg  |700px|center|plasmid = ]]
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Time required : A lOT !!!!!
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Experiments ran :
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{|
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|- style="background: #0a3585; text-align: center; color:white; font-weight:bold; "
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|width= 300px| row 1
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|width=300px| row 2
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|width=300px| row 3
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|- style="background: #bebebe; text-align: center;"
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|'''PCR :'''
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|'''PCR :'''
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|'''PCR :'''
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|- style="background: #d8d8d8; text-align: center;"
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|'''Verification on gel :'''
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ok
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|'''Verification on gel :'''
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ok
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|'''Verification on gel :'''
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ok
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|- style="background: #bebebe; text-align: center;" 
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|'''Purification on gel :'''
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ok
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|'''Purification on gel :'''
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ok
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|'''Purification on gel :'''
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ok
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|- style="background: #d8d8d8; text-align: center;"
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|'''digestion:'''
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|'''digestion:'''
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|'''digestion:'''
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|- style="background: #bebebe; text-align: center;" 
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|'''verification digestion:'''
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ok
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|'''verification digestion:'''
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ok
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|'''verification digestion:'''
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ok
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|- style="background: #d8d8d8; text-align: center;"
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|'''ligation:'''
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|'''ligation:'''
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|'''ligation:'''
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|- style="background: #bebebe; text-align: center;" 
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|'''PCR colo :'''
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ok
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|'''PCR colo :'''
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ok
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|'''PCR colo :'''
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ok
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|- style="background: #d8d8d8; text-align: center;"
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|'''miniprep:'''
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clone :
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|'''miniprep:'''
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clone :
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|'''miniprep:'''
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clone :
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|- style="background: #bebebe; text-align: center;" 
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|'''sequencing :'''
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ok
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|'''sequencing :'''
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ok
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|'''sequencing :'''
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ok
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|}
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===G3P===
===G3P===
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<div class="francais">
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Bien que non réalisé, nous avions prévus de faire ses manipulations afin de vérifier que la G3P ets bien exprimer à la surface bactériène et que cela induisse la fusion memebranaire.
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Even though it has not been realized, we planned to do these experiments to verify that G3P is expressed into the bacterial surface and induces the membranal fusion.  
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</div>
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*<b>Surface expression of G3P</b>
*<b>Surface expression of G3P</b>
Surface expression of G3P could be seen with antibodies.<br>
Surface expression of G3P could be seen with antibodies.<br>
Culture of bacteria expressing OmpA-linker-G3P construction on a membrane. Adding antibodies anti-G3P. Revelation should shows whether G3P is expressed at the surface of bacteria.
Culture of bacteria expressing OmpA-linker-G3P construction on a membrane. Adding antibodies anti-G3P. Revelation should shows whether G3P is expressed at the surface of bacteria.
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*<b>Floculation test</b>
*<b>Floculation test</b>

Latest revision as of 15:44, 17 October 2009

iGEM > Paris > Reception > Testing > Fusion

WetLab

Main - Addressing - Production - reception -
Reception


Fusion

Fusion : the construction required for the fusion of the vesicles that contain the message.

G3P , OmpAL , Jun, Fos , and AIDA protein.

plasmid =




plasmid =




Time required : A lOT !!!!!

Experiments ran :

row 1 row 2 row 3
PCR :



PCR : PCR :


Verification on gel :

ok

Verification on gel :

ok

Verification on gel :

ok

Purification on gel :

ok

Purification on gel :

ok

Purification on gel :

ok


digestion:



digestion: digestion:
verification digestion:

ok

verification digestion:

ok

verification digestion:

ok


ligation:


ligation: ligation:


PCR colo :

ok

PCR colo :

ok

PCR colo :

ok


miniprep:

clone :

miniprep:

clone :

miniprep:

clone :


sequencing :

ok

sequencing :

ok

sequencing :

ok



G3P

Even though it has not been realized, we planned to do these experiments to verify that G3P is expressed into the bacterial surface and induces the membranal fusion.


  • Surface expression of G3P

Surface expression of G3P could be seen with antibodies.
Culture of bacteria expressing OmpA-linker-G3P construction on a membrane. Adding antibodies anti-G3P. Revelation should shows whether G3P is expressed at the surface of bacteria.


  • Floculation test

"Fusion" could be approached by a flocculation test.
Two separate bacterial population growth on media. A population (F-) expressing the OmpA-linker_G3P construction and a population (F +) which express sexual pilus (by expression of the episome F).

Then we growth bacteria without agitation and we look (compared to culture controls) the speed of sedimentation. Faster sedimentation is due to an interaction between bacterial populations showing an increase of contact time. At vesicle level, it induce membrane fusion.

Retrieved from "http://2009.igem.org/Team:Paris/Transduction_testing_fusion"