"
Team:Sweden/Project
From 2009.igem.org
(→Project) |
|||
| Line 35: | Line 35: | ||
---- | ---- | ||
| - | <font color="blue">We want to implement an automaton in the cell. It is based on a few simple rules on how to parse a simple sentence like<br>'''The little girl plays ball''' or '''Boys stroke the little dog'''.<br>These simple rules are : | + | <font color="blue">We want to implement an automaton in the E-Coli cell. It is based on a few simple grammer rules on how to parse a simple sentence like<br>'''The little girl plays ball''' or '''Boys stroke the little dog'''.<br>These simple rules are : |
<ul type="disc"> | <ul type="disc"> | ||
<li>S --> NP VP | <li>S --> NP VP | ||
Revision as of 17:11, 20 October 2009
| Home | Team | Project | Mathematical Modelling | Logbook | Result | Sponsors |
|---|
Project
|
We want to implement an automaton in the E-Coli cell. It is based on a few simple grammer rules on how to parse a simple sentence like
We target only the parts of speech (POS) tags which in these above grammars are:
This way the grammar can be implemented as a finite state automaton (FSA) and not as a push-down automaton. A finite state automation is a 5-tupel A = (Q, Σ, δ, s0, F), where Q is a finite set of states, Σ is the finite set of input symbols (alphabet), δ is the transition function, δ: Q × Σ -> Q, s0 is the start state and F is the set of final/accepting states. Our AimThe sentence in our project is a string of different reagents which will be introduced to the cell one by one. As soon as a wrong input is detected the cell will light up red. A sentence is finished by a stop reagent and then the cell will light up green. |
The image represents an automaton that show how state transition occurs in a particular sentence parsing automaton  |
Safety issues\ We suggest our plasmid using a current Biobrick in the bank and no new bio bricks are suggested or built. So no safety issue is raised so far. |
 |
