Team:Cambridge/Project/CA03

From 2009.igem.org

(Difference between revisions)
(In vivo expression of our devices in E.coli MG1655)
(In vivo expression of our devices in E.coli MG1655)
Line 13: Line 13:
== TESTING AND CHARACTERISATION ==
== TESTING AND CHARACTERISATION ==
-
=== In vivo expression of our devices in E.coli MG1655 ===
+
=== In vivo expression of our devices in ''E.coli'' MG1655 ===
Our preliminary research indicated that carotenoids production in ''E.coli'' TOP10 was very weak. We decided to use another strain, ''E.coli'' MG1655, for in vivo expression of our devices. The amount of carotenoids produced became visibly higher. Generally, the colour became visible after incubation for about 12 hours.
Our preliminary research indicated that carotenoids production in ''E.coli'' TOP10 was very weak. We decided to use another strain, ''E.coli'' MG1655, for in vivo expression of our devices. The amount of carotenoids produced became visibly higher. Generally, the colour became visible after incubation for about 12 hours.
Line 38: Line 38:
|[[Image:Cam09_caro_1.jpg]]
|[[Image:Cam09_caro_1.jpg]]
|[[Image:Cam09_caro_2.jpg]]
|[[Image:Cam09_caro_2.jpg]]
 +
|- style="color:#333; background-color:#FFFFFF;" cellpadding="6" cellspacing="0" border="1"
 +
|''E.coli'' MG1655 transformed with K274210 and grown on agar plate overnight.
 +
|Cell pellet of ''E.coli'' MG1655 transformed with K274220 (from 20mL LB culture at 37°C for 24 hours).
 +
|- style="color:#333; background-color:#FFFFFF;" cellpadding="6" cellspacing="0" border="1"
 +
|}
 +
 +
=== Quantitative measurement of pigment production ===
 +
 +
In addition to visual inspection of coloured colonies, we hope to quantitatively measure the amount of lycopene or β-carotene produced by our devices. We grew transformed ''E.coli'' MG1655 in LB culture at 37°C for 24 hours and collected cell pellet by centrifugation. Acetone was added to the cell pellet and warmed at 50°C for 10 minutes, allowing carotenoids (lycopene or β-carotene) in the cells to dissolve. The acetone extracts were then put into MicroPlate Reader for a full photospectrum scan (wavelengths between 300nm and 800nm). The absorbance curves showed peaks characteristics of the respective carotenoids: at wavelength 474nm for lycopene, and 456nm for β-carotene. In the case of β-carotene, we used pure β-carotene of known amount as the standard reference and included it in the graph below.
 +
 +
 +
'''''Lycopene-producing device (constitutive)'''''
 +
{| style="color:#333; background-color:#FFFFFF;" cellpadding="5" cellspacing="0" border="1"
 +
|[[Image:Cam09_lyco_1.jpg]]
 +
|[[Image:Cam09_lyco_2.jpg]]
|- style="color:#333; background-color:#FFFFFF;" cellpadding="6" cellspacing="0" border="1"
|- style="color:#333; background-color:#FFFFFF;" cellpadding="6" cellspacing="0" border="1"
|''E.coli'' MG1655 transformed with K274110 and grown on agar plate overnight.
|''E.coli'' MG1655 transformed with K274110 and grown on agar plate overnight.
Line 43: Line 58:
|- style="color:#333; background-color:#FFFFFF;" cellpadding="6" cellspacing="0" border="1"
|- style="color:#333; background-color:#FFFFFF;" cellpadding="6" cellspacing="0" border="1"
|}
|}
 +
<!--Do not remove the first and last lines in this page!-->{{Template:CambridgeBottom}}
<!--Do not remove the first and last lines in this page!-->{{Template:CambridgeBottom}}

Revision as of 12:14, 21 October 2009


Carotenoids

TESTING AND CHARACTERISATION

In vivo expression of our devices in E.coli MG1655

Our preliminary research indicated that carotenoids production in E.coli TOP10 was very weak. We decided to use another strain, E.coli MG1655, for in vivo expression of our devices. The amount of carotenoids produced became visibly higher. Generally, the colour became visible after incubation for about 12 hours.


Lycopene-producing device (constitutive)

Agar plate colonies Cell pellet from LB culture
Cam09 lyco 1.jpg Cam09 lyco 2.jpg
E.coli MG1655 transformed with K274110 and grown on agar plate overnight. Cell pellet of E.coli MG1655 transformed with K274210 (from 20mL LB culture at 37°C for 24 hours).


β -carotene-producing device (constitutive)

Agar plate colonies Cell pellet from LB culture
Cam09 caro 1.jpg Cam09 caro 2.jpg
E.coli MG1655 transformed with K274210 and grown on agar plate overnight. Cell pellet of E.coli MG1655 transformed with K274220 (from 20mL LB culture at 37°C for 24 hours).

Quantitative measurement of pigment production

In addition to visual inspection of coloured colonies, we hope to quantitatively measure the amount of lycopene or β-carotene produced by our devices. We grew transformed E.coli MG1655 in LB culture at 37°C for 24 hours and collected cell pellet by centrifugation. Acetone was added to the cell pellet and warmed at 50°C for 10 minutes, allowing carotenoids (lycopene or β-carotene) in the cells to dissolve. The acetone extracts were then put into MicroPlate Reader for a full photospectrum scan (wavelengths between 300nm and 800nm). The absorbance curves showed peaks characteristics of the respective carotenoids: at wavelength 474nm for lycopene, and 456nm for β-carotene. In the case of β-carotene, we used pure β-carotene of known amount as the standard reference and included it in the graph below.


Lycopene-producing device (constitutive)

Cam09 lyco 1.jpg Cam09 lyco 2.jpg
E.coli MG1655 transformed with K274110 and grown on agar plate overnight. Cell pellet of E.coli MG1655 transformed with K274210 (from 20mL LB culture at 37°C for 24 hours).


Cambridge Sponsor Logo1.pngCambridge Sponsor Logo2.pngCambridge Sponsor Logo3.pngCambridge Sponsor Logo4.pngCambridge Sponsor Logo5.pngCambridge Sponsor Logo8.pngCambridge Sponsor Logo6.pngCambridge Sponsor Logo7.pngCambridge Sponsor Logo9.pngCambridge Sponsor Logo10.pngCambridge Sponsor Logo11.pngCambridge Sponsor Logo12.pngCambridge Sponsor Logo14.pngCambridge Sponsor Logo13.pngCambridge Sponsor Logo15.pngCambridge Sponsor Logo16.pngCambridge Sponsor Logo17.pngCambridge Sponsor Logo18.pngCambridge Sponsor Logo19.pngBmglab.jpg