Team:Groningen/Literature
From 2009.igem.org
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:Chang CC, Liao WF, Huang PC. (1998). "[http://www.ncbi.nlm.nih.gov/pubmed/9579658 Cysteine contributions to metal binding preference for Zn/Cd in the beta-domain of metallothionein]". '' Protein Eng.'' '''11(1)''':42-46 | :Chang CC, Liao WF, Huang PC. (1998). "[http://www.ncbi.nlm.nih.gov/pubmed/9579658 Cysteine contributions to metal binding preference for Zn/Cd in the beta-domain of metallothionein]". '' Protein Eng.'' '''11(1)''':42-46 | ||
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+ | :Deng X, Li QB, Lu YH, Sun DH, Huang YL, Chen XR. (2003). "[http://www.ncbi.nlm.nih.gov/pubmed/12727263 Bioaccumulation of nickel from aqueous solutions by genetically engineered Escherichia coli.]". '' Water Res.'' '''37(10)''':2505-2511 | ||
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;Deng2007 {{anchor|Deng2007}} | ;Deng2007 {{anchor|Deng2007}} |
Revision as of 14:37, 10 August 2009
Literature
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Currently many references are connected to the paragraph its information has been used.
Our metal related literature by subject:
Cu | Zn | As | Cd | Sb | Hg | ||
---|---|---|---|---|---|---|---|
Importers | GlpF | Meng2004, Rosen2009 | Meng2004 | ||||
HmtA | |||||||
Exporters | ArsB | Tisa1989, Carlin1995, | Tisa1989, Carlin1995, Rosen1996, Meng2004, Summers2009 | ||||
Accumulators | ArsR | Carlin1995, Rosen1996, Chen1997, Kostal2004, Rensing2005, Summers2009 | Carlin1995, Rosen1996, Summers2009 | ||||
ArsD | Chen1997, Lin2007-1/2, Summers2009 | Chen1997, Lin2007-1/2, Summers2009 | |||||
SmtA | Shi1992 | Shi1992, Turner1995, Robinson2001, Blindauer2002 | Shi1992 | Shi1992 | |||
MymT | |||||||
MT | Ngu2006,Singh2008 | ||||||
Promoters |
- Alon2007
- Uri Alon (2007). Introduction to systems biology: design principles of biological circuits Chapman & Hall/CRC. ISBN 978-1-58488-642-6
- Baldwin1995
- W.W. Baldwin, Richard Myer, Nicole Powell, et al (August 1995). "Buoyant density of Escherichia coli is determined solely by the osmolarity of the culture medium". Archives of Microbiology 164(2): 155-157
- Beyer2004
- Andreas Beyer, Jens Hollunder, Heinz-Peter Nasheuer and Thomas Wilhelm (August 2004). "Post-transcriptional Expression Regulation in the Yeast Saccharomyces cerevisiae on a Genomic Scale". Molecular & Cellular Proteomics 3: 1083-1092
- Blindauer2002
- Claudia A. Blindauer, Mark D. Harrison, Andrea K. Robinson, et al (2002). "Multiple bacteria encode metallothioneins and SmtA-like zinc fingers". Molecular Microbiology 45(5): 1421-1432
- Bylund1991
- J.E. Bylund, M.A. Haines, K. Walsh, et al (September 1991). "Buoyant density studies of several mecillinam-resistant and division mutants of Escherichia coli". Journal of Bacteriology 173(17): 5396-5402
- Brady1994
- Brady D, Rose PD, Duncan JR. (1994). "The use of hollow fiber cross-flow microfiltration in bioaccumulation and continuous removal of heavy metals from solution by Saccharomyces cerevisiae.". Biotechnol Bioeng. 44(11):1362-1366
- Carlin1995
- Arthur Carlin, Weiping Shi, Saibal Dey and Barry P. Rosen (February 1995). "The ars Operon of Escherichia coli Confers Arsenical and Antimonial Resistance". Journal of Bacteriology 177(4): 981-986
- Chen1997
- Yanxiang Chen and Barry P. Rosen (May 1997). "Metalloregulatory Properties of the ArsD Repressor". The Journal of Biological Chemistry 272(22): 14257-14262
- Chen1997-2
- Chen S, Wilson DB. (1997). "Genetic engineering of bacteria and their potential for Hg2+ bioremediation ". Biodegradation 8(2): 97-103
- Chen1998
- Chen S, Kim E, Shuler ML, Wilson DB. (1998). "Hg2+ removal by genetically engineered Escherichia coli in a hollow fiber bioreactor". Biotechnol Prog. 14(5):667-671
- Chang1998
- Chang CC, Liao WF, Huang PC. (1998). "Cysteine contributions to metal binding preference for Zn/Cd in the beta-domain of metallothionein". Protein Eng. 11(1):42-46
- Deng2003
- Deng X, Li QB, Lu YH, Sun DH, Huang YL, Chen XR. (2003). "Bioaccumulation of nickel from aqueous solutions by genetically engineered Escherichia coli.". Water Res. 37(10):2505-2511
- Deng2007
- Deng X, Yi XE, Liu G. (2007). "Cadmium removal from aqueous solution by gene-modified Escherichia coli JM109". Journal Hazard Mater. 139(2):340-344
- Deng2008
- Deng X, Hu ZL, Yi XE. (May 2008). "Continuous treatment process of mercury removal from aqueous solution by growing recombinant E. coli cells and modeling study". Journal Hazard Mater. 153(1-2):487-492
- Dey1995
- Saibal Dey, Barry P. ROSEN (1995). "Dual Mode of Energy Coupling by the Oxyanion Translocating ArsB Protein". JOURNAL OF BACTERIOLOGY 177(2): 385–389
- Gilchrist2007
- Michael A. Gilchrist (2007). "Combining Models of Protein Translation and Population Genetics to Predict Protein Production Rates from Codon Usage Patterns". Molecular Biology and Evolution 24(11): 2362-2372
- Goudar1999
- Chetan T. Goudara, Jagadeesh R. Sonnadb and Ronald G. Duggleby (January 1999). "Parameter estimation using a direct solution of the integrated Michaelis-Menten equation". Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology 1429(2): 377-383
- Hoefnagel2002
- M.H.N. Hoefnagel, A. van der Burgt, D.E. Martens, et al (March 2002). "Time Dependent Responses of Glycolytic Intermediates in a Detailed Glycolytic Model of Lactococcus Lactis During Glucose Run-Out Experiments". Molecular Biology Reports 29: 157-161
- Holland2009
- Daryl P. Holland, Anthony E. Walsby (January 2009). "Digital recordings of gas-vesicle collapse used to measure turgor pressure and cell–water relations of cyanobacterial cells ". Journal of Microbiological Methods 77: 214-224
- Kelly2009
- Jason R. Kelly, Adam J. Rubin, Joseph H. Davis, et al (March 2009). "Measuring the activity of BioBrick promoters using an in vivo reference standard". Journal of Biological Engineering 3: 4
- Kostal2004
- Jan Kostal, Rosanna Yang, Cindy H. Wu, et al (August 2004). "Enhanced Arsenic Accumulation in Engineered Bacterial Cells Expressing ArsR". Applied and Environmental Microbiology 70(8): 4582–4587
- Li1998
- Ning Li and Maura C. Cannon (May 1998). "Gas Vesicle Genes Identified in Bacillus megaterium and Functional Expression in Escherichia coli". Journal of Bacteriology 180(9): 2450–2458
- Lin2007-1
- Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (April 2007). "ArsD Residues Cys12, Cys13, and Cys18 Form an As(III)-binding Site Required for Arsenic Metallochaperone Activity". The Journal of Biological Chemistry 282(23): 16783–16791
- Lin2007-2
- Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (December 2007). "ArsD: an As(III) metallochaperone for the ArsAB As(III)-translocating ATPase". Journal of Bioenergetics and Biomembranes 39: 453-458
- Meng2004
- Yu-Ling Meng, Zijuan Liu and Barry P. Rosen (February 2004). "As(III) and Sb(III) Uptake by GlpF and Efflux by ArsB in Escherichia coli". Journal of Biological Chemistry 279: 18334-18341
- Neves1999
- Ana Rute Neves, Ana Ramos, Marta C. Nunes, et al (1999). "In vivo nuclear magnetic resonance studies of glycolytic kinetics in Lactococcus lactis". Biotechnology and Bioengineering 64: 200-212
- Ngu2006
- Thanh T. Ngu, M. Stillman (April 2006). "Arsenic Binding to Human Metallothionein". J. Am. Chem. Soc 128 (38): 12473–12483
- Poole1977
- R.K. Poole (1977). "Fluctuations in Buoyant Density during the Cell Cycle of Escherichia coli K12". Journal of General Microbiology 98: 177-186
- Rensing2005
- Christopher Rensing (June 2005). "Form and Function in Metal-Dependent Transcriptional Regulation: Dawn of the Enlightenment". Journal of Bacteriology 187(12): 3909–3912
- Robinson2001
- Nigel J. Robinson, Simon K. Whitehall and Jennifer S. Cavet (2001). "Microbial Metallothioneins". Advances in Microbial Physiology 44: 183-213
- Rosen1996
- Barry P. Rosen (August 1996). "Bacterial resistance to heavy metals and metalloids". Journal of Biological Inorganic Chemistry 1(4): 273-277
- Rosen2009
- Barry P. Rosen and Zijuan Liu (April 2009). "Transport pathways for arsenic and selenium: A minireview". Environment International 35(3): 512-515
- Schwartz2008
- Russel Schwartz (2008). Biological modeling and simulation: a survey of practical models, algorithms, and numerical methods MIT Press. ISBN 978-0-262-19584-3
- Shi1992
- Jianguo Shi, William P. Lindsay, James W. Huckle (June 1992). "Cyanobacterial metallothionein gene expressed in Escherichia coli: Metal-binding properties of the expressed protein". FEBS Letters 303(2-3): 159-163
- Singh2008
- Shailendra Singh, Ashok Mulchandani, Wilfred Chen (February 2008). "Highly Selective and Rapid Arsenic Removal by Metabolically Engineered Escherichia coli Cells Expressing Fucus vesiculosus Metallothionein". MICROBIOLOGY 74(9): 2924–2927
- Summers2009
- Anne O. Summers (April 2009). "Damage control: regulating defenses against toxic metals and metalloids". Current Opinion in Microbiology 12(2): 138-144
- Tisa1989
- Louis S. Tisa and Barry P. Rosen (January 1990). "Molecular characterization of an anion pump. The ArsB protein is the membrane anchor for the ArsA protein". The journal of biological chemistry 265(1): 190-194
- Turner1995
- Jennifer S. Turner, Nigel J. Robinson and Amit Gupta (March 1995). "Construction of Zn2+/Cd2+-tolerant cyanobacteria with a modified metallothionein divergon: Further analysis of the function and regulation of smt". Journal of Industrial Microbiology and Biotechnology 14(3-4): 259-264
- Walsby1979
- A.E. Walsby (April 1979). "Average thickness of the gas vesicle wall in Anabaena flos-aquae". Journal of Molecular Biology 129(2): 279-285
- Walsby1994
- A.E. Walsby (March 1994). "Gas Vesicles". Microbiological reviews 58(1): 94-144
Miscellaneous: