Team:Groningen/Literature
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;Alon2007 {{anchor|Alon2007}} | ;Alon2007 {{anchor|Alon2007}} | ||
:{{star}} Uri Alon (2007). ''Introduction to systems biology: design principles of biological circuits'' Chapman & Hall/CRC. ISBN 978-1-58488-642-6 | :{{star}} Uri Alon (2007). ''Introduction to systems biology: design principles of biological circuits'' Chapman & Hall/CRC. ISBN 978-1-58488-642-6 | ||
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;Baldwin1995 {{anchor|Baldwin1995}} | ;Baldwin1995 {{anchor|Baldwin1995}} | ||
:W.W. Baldwin, Richard Myer, Nicole Powell, ''et al'' (August 1995). "[http://www.springerlink.com/content/nu1lkduf3w89fmd8 Buoyant density of Escherichia coli is determined solely by the osmolarity of the culture medium]". ''Archives of Microbiology'' '''164(2)''': 155-157 | :W.W. Baldwin, Richard Myer, Nicole Powell, ''et al'' (August 1995). "[http://www.springerlink.com/content/nu1lkduf3w89fmd8 Buoyant density of Escherichia coli is determined solely by the osmolarity of the culture medium]". ''Archives of Microbiology'' '''164(2)''': 155-157 | ||
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;Beyer2004 {{anchor|Beyer2004}} | ;Beyer2004 {{anchor|Beyer2004}} | ||
:Andreas Beyer, Jens Hollunder, Heinz-Peter Nasheuer and Thomas Wilhelm (August 2004). "[http://dx.doi.org/10.1074/mcp.M400099-MCP200 Post-transcriptional Expression Regulation in the Yeast Saccharomyces cerevisiae on a Genomic Scale]". ''Molecular & Cellular Proteomics'' '''3''': 1083-1092 | :Andreas Beyer, Jens Hollunder, Heinz-Peter Nasheuer and Thomas Wilhelm (August 2004). "[http://dx.doi.org/10.1074/mcp.M400099-MCP200 Post-transcriptional Expression Regulation in the Yeast Saccharomyces cerevisiae on a Genomic Scale]". ''Molecular & Cellular Proteomics'' '''3''': 1083-1092 | ||
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;Blancato2006 {{anchor|Blancato2006}} | ;Blancato2006 {{anchor|Blancato2006}} | ||
:Blancato VS, Magni C, Lolkema JS. (October 2006). "[http://dx.doi.org/doi:10.1016/j.jmb.2009.02.015 Functional characterization and Me ion specificity of a Ca-citrate transporter from Enterococcus faecalis]". ''FEBS journal'' '''273(22)''': 5121-5130 | :Blancato VS, Magni C, Lolkema JS. (October 2006). "[http://dx.doi.org/doi:10.1016/j.jmb.2009.02.015 Functional characterization and Me ion specificity of a Ca-citrate transporter from Enterococcus faecalis]". ''FEBS journal'' '''273(22)''': 5121-5130 | ||
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;Bowen1965 {{anchor|Bowen1965}} | ;Bowen1965 {{anchor|Bowen1965}} | ||
:C.C. Bowen and T.E. Jensen ( March 1965). "[http://dx.doi.org/10.1126/science.147.3664.1460 Blue-Green Algae: Fine Structure of the Gas Vacuoles]". ''Science '' '''147(3664)''': 1460 - 1462 | :C.C. Bowen and T.E. Jensen ( March 1965). "[http://dx.doi.org/10.1126/science.147.3664.1460 Blue-Green Algae: Fine Structure of the Gas Vacuoles]". ''Science '' '''147(3664)''': 1460 - 1462 | ||
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;Blindauer2002 {{anchor|Blindauer2002}} | ;Blindauer2002 {{anchor|Blindauer2002}} | ||
:Claudia A. Blindauer, Mark D. Harrison, Andrea K. Robinson, ''et al'' (2002). "[http://dx.doi.org/10.1046/j.1365-2958.2002.03109.x Multiple bacteria encode metallothioneins and SmtA-like zinc fingers]". ''Molecular Microbiology'' '''45(5)''': 1421-1432 | :Claudia A. Blindauer, Mark D. Harrison, Andrea K. Robinson, ''et al'' (2002). "[http://dx.doi.org/10.1046/j.1365-2958.2002.03109.x Multiple bacteria encode metallothioneins and SmtA-like zinc fingers]". ''Molecular Microbiology'' '''45(5)''': 1421-1432 | ||
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;Blindauer2001 {{anchor|Blindauer2001}} | ;Blindauer2001 {{anchor|Blindauer2001}} | ||
:Blindauer CA, Harrison MD, ''et al'' (2001). "[http://www.ncbi.nlm.nih.gov/pubmed/11493688] A metallothionein containing a zinc finger within a four-metal cluster protects a bacterium from zinc toxicity.". '' Proc Natl Acad Sci USA. '' '''98(17)''': ):9593-9598 | :Blindauer CA, Harrison MD, ''et al'' (2001). "[http://www.ncbi.nlm.nih.gov/pubmed/11493688] A metallothionein containing a zinc finger within a four-metal cluster protects a bacterium from zinc toxicity.". '' Proc Natl Acad Sci USA. '' '''98(17)''': ):9593-9598 | ||
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;Bylund1991 {{anchor|Bylund1991}} | ;Bylund1991 {{anchor|Bylund1991}} | ||
:J.E. Bylund, M.A. Haines, K. Walsh, ''et al'' (September 1991). "[http://jb.asm.org/cgi/content/abstract/173/17/5396 Buoyant density studies of several mecillinam-resistant and division mutants of Escherichia coli]". ''Journal of Bacteriology'' '''173(17):''' 5396-5402 | :J.E. Bylund, M.A. Haines, K. Walsh, ''et al'' (September 1991). "[http://jb.asm.org/cgi/content/abstract/173/17/5396 Buoyant density studies of several mecillinam-resistant and division mutants of Escherichia coli]". ''Journal of Bacteriology'' '''173(17):''' 5396-5402 | ||
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;Brady1994 {{anchor|Brady1994}} | ;Brady1994 {{anchor|Brady1994}} | ||
:Brady D, Rose PD, Duncan JR. (1994). "[http://www.ncbi.nlm.nih.gov/pubmed/18618649 The use of hollow fiber cross-flow microfiltration in bioaccumulation and continuous removal of heavy metals from solution by Saccharomyces cerevisiae.]". '' Biotechnol Bioeng. '' '''44(11)''':1362-1366 | :Brady D, Rose PD, Duncan JR. (1994). "[http://www.ncbi.nlm.nih.gov/pubmed/18618649 The use of hollow fiber cross-flow microfiltration in bioaccumulation and continuous removal of heavy metals from solution by Saccharomyces cerevisiae.]". '' Biotechnol Bioeng. '' '''44(11)''':1362-1366 | ||
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;Cadosch2008 {{anchor|Cadosch2008}} | ;Cadosch2008 {{anchor|Cadosch2008}} | ||
:Cadosch D, Meagher J, Gautschi OP, Filgueira L. (December 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/19133293 Uptake and intracellular distribution of various metal ions in human monocyte-derived dendritic cells detected by Newport Green DCF diacetate ester]". '' Journal Neurosci Methods.'' '''178(1)''':182-187 | :Cadosch D, Meagher J, Gautschi OP, Filgueira L. (December 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/19133293 Uptake and intracellular distribution of various metal ions in human monocyte-derived dendritic cells detected by Newport Green DCF diacetate ester]". '' Journal Neurosci Methods.'' '''178(1)''':182-187 | ||
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;Carlin1995 {{anchor|Carlin1995}} | ;Carlin1995 {{anchor|Carlin1995}} | ||
:Arthur Carlin, Weiping Shi, Saibal Dey and Barry P. Rosen (February 1995). "[http://www.ncbi.nlm.nih.gov/pubmed/7860609 The ars Operon of Escherichia coli Confers Arsenical and Antimonial Resistance]". ''Journal of Bacteriology'' '''177(4)''': 981-986 | :Arthur Carlin, Weiping Shi, Saibal Dey and Barry P. Rosen (February 1995). "[http://www.ncbi.nlm.nih.gov/pubmed/7860609 The ars Operon of Escherichia coli Confers Arsenical and Antimonial Resistance]". ''Journal of Bacteriology'' '''177(4)''': 981-986 | ||
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;Chen1997 {{anchor|Chen1997}} | ;Chen1997 {{anchor|Chen1997}} | ||
:{{star}} Yanxiang Chen and Barry P. Rosen (May 1997). "[http://www.ncbi.nlm.nih.gov/pubmed/9162059 Metalloregulatory Properties of the ArsD Repressor]". ''The Journal of Biological Chemistry'' '''272(22)''': 14257-14262 | :{{star}} Yanxiang Chen and Barry P. Rosen (May 1997). "[http://www.ncbi.nlm.nih.gov/pubmed/9162059 Metalloregulatory Properties of the ArsD Repressor]". ''The Journal of Biological Chemistry'' '''272(22)''': 14257-14262 | ||
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;Chen1997-2 {{anchor|Chen1997-2}} | ;Chen1997-2 {{anchor|Chen1997-2}} | ||
:Chen S, Wilson DB. (1997). "[http://www.ncbi.nlm.nih.gov/pubmed/9342882 Genetic engineering of bacteria and their potential for Hg2+ bioremediation] ". ''Biodegradation'' '''8(2)''': 97-103 | :Chen S, Wilson DB. (1997). "[http://www.ncbi.nlm.nih.gov/pubmed/9342882 Genetic engineering of bacteria and their potential for Hg2+ bioremediation] ". ''Biodegradation'' '''8(2)''': 97-103 | ||
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;Chen1998 {{anchor|Chen1998}} | ;Chen1998 {{anchor|Chen1998}} | ||
:Chen S, Kim E, Shuler ML, Wilson DB. (1998). "[http://www.ncbi.nlm.nih.gov/pubmed/9758654 Hg2+ removal by genetically engineered Escherichia coli in a hollow fiber bioreactor]". ''Biotechnol Prog. '' '''14(5)''':667-671 | :Chen S, Kim E, Shuler ML, Wilson DB. (1998). "[http://www.ncbi.nlm.nih.gov/pubmed/9758654 Hg2+ removal by genetically engineered Escherichia coli in a hollow fiber bioreactor]". ''Biotechnol Prog. '' '''14(5)''':667-671 | ||
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;Chang1998 {{anchor|Chang1998}} | ;Chang1998 {{anchor|Chang1998}} | ||
:Chang CC, Liao WF, Huang PC. (1998). "[http://www.ncbi.nlm.nih.gov/pubmed/9579658 Cysteine contributions to metal binding preference for Zn/Cd in the beta-domain of metallothionein]". '' Protein Eng.'' '''11(1)''':42-46 | :Chang CC, Liao WF, Huang PC. (1998). "[http://www.ncbi.nlm.nih.gov/pubmed/9579658 Cysteine contributions to metal binding preference for Zn/Cd in the beta-domain of metallothionein]". '' Protein Eng.'' '''11(1)''':42-46 | ||
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;Deng2003 {{anchor|Deng2003}} | ;Deng2003 {{anchor|Deng2003}} | ||
:Deng X, Li QB, Lu YH, Sun DH, Huang YL, Chen XR. (2003). "[http://www.ncbi.nlm.nih.gov/pubmed/12727263 Bioaccumulation of nickel from aqueous solutions by genetically engineered Escherichia coli.]". '' Water Res.'' '''37(10)''':2505-2511 | :Deng X, Li QB, Lu YH, Sun DH, Huang YL, Chen XR. (2003). "[http://www.ncbi.nlm.nih.gov/pubmed/12727263 Bioaccumulation of nickel from aqueous solutions by genetically engineered Escherichia coli.]". '' Water Res.'' '''37(10)''':2505-2511 | ||
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;Deng2007 {{anchor|Deng2007}} | ;Deng2007 {{anchor|Deng2007}} | ||
:Deng X, Yi XE, Liu G. (2007). "[http://www.ncbi.nlm.nih.gov/pubmed/16890348 Cadmium removal from aqueous solution by gene-modified Escherichia coli JM109]". '' Journal Hazard Mater. '' '''139(2)''':340-344 | :Deng X, Yi XE, Liu G. (2007). "[http://www.ncbi.nlm.nih.gov/pubmed/16890348 Cadmium removal from aqueous solution by gene-modified Escherichia coli JM109]". '' Journal Hazard Mater. '' '''139(2)''':340-344 | ||
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;Deng2008 {{anchor|Deng2008}} | ;Deng2008 {{anchor|Deng2008}} | ||
:Deng X, Hu ZL, Yi XE. (May 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/17920767 Continuous treatment process of mercury removal from aqueous solution by growing recombinant E. coli cells and modeling study]". '' Journal Hazard Mater. '' '''153(1-2)''':487-492 | :Deng X, Hu ZL, Yi XE. (May 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/17920767 Continuous treatment process of mercury removal from aqueous solution by growing recombinant E. coli cells and modeling study]". '' Journal Hazard Mater. '' '''153(1-2)''':487-492 | ||
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;Dey1995 {{anchor|Dey1995}} | ;Dey1995 {{anchor|Dey1995}} | ||
:Saibal Dey, Barry P. Rosen (1995). "[http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=176602 Dual Mode of Energy Coupling by the Oxyanion Translocating ArsB Protein]". ''JOURNAL OF BACTERIOLOGY'' '''177(2)''': 385–389 | :Saibal Dey, Barry P. Rosen (1995). "[http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=176602 Dual Mode of Energy Coupling by the Oxyanion Translocating ArsB Protein]". ''JOURNAL OF BACTERIOLOGY'' '''177(2)''': 385–389 | ||
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;Fowler1987 {{anchor|Fowler1987}} | ;Fowler1987 {{anchor|Fowler1987}} | ||
:Fowler BA. (1987). "[http://www.ncbi.nlm.nih.gov/pubmed/3297654 Intracellular compartmentation of metals in aquatic organisms: roles in mechanisms of cell injury]". '' Environ Health Perspect.'' '''7(1)''': 121-128 | :Fowler BA. (1987). "[http://www.ncbi.nlm.nih.gov/pubmed/3297654 Intracellular compartmentation of metals in aquatic organisms: roles in mechanisms of cell injury]". '' Environ Health Perspect.'' '''7(1)''': 121-128 | ||
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;Gilchrist2007 {{anchor|Gilchrist2007}} | ;Gilchrist2007 {{anchor|Gilchrist2007}} | ||
:Michael A. Gilchrist (2007). "[http://dx.doi.org/10.1093/molbev/msm169 Combining Models of Protein Translation and Population Genetics to Predict Protein Production Rates from Codon Usage Patterns]". ''Molecular Biology and Evolution'' '''24(11)''': 2362-2372 | :Michael A. Gilchrist (2007). "[http://dx.doi.org/10.1093/molbev/msm169 Combining Models of Protein Translation and Population Genetics to Predict Protein Production Rates from Codon Usage Patterns]". ''Molecular Biology and Evolution'' '''24(11)''': 2362-2372 | ||
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;Gold2008 {{anchor|Gold2008}} | ;Gold2008 {{anchor|Gold2008}} | ||
:Gold B, Deng H, ''et al''(2008). "[http://www.ncbi.nlm.nih.gov/pubmed/18724363 Identification of a copper-binding metallothionein in pathogenic mycobacteria]". ''Nat Chem Biol.'' '''4(10)''': 609-616 | :Gold B, Deng H, ''et al''(2008). "[http://www.ncbi.nlm.nih.gov/pubmed/18724363 Identification of a copper-binding metallothionein in pathogenic mycobacteria]". ''Nat Chem Biol.'' '''4(10)''': 609-616 | ||
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;Goudar1999 {{anchor|Goudar1999}} | ;Goudar1999 {{anchor|Goudar1999}} | ||
:Chetan T. Goudara, Jagadeesh R. Sonnadb and Ronald G. Duggleby (January 1999). "[http://dx.doi.org/10.1016/S0167-4838(98)00247-7 Parameter estimation using a direct solution of the integrated Michaelis-Menten equation]". ''Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology'' '''1429(2)''': 377-383 | :Chetan T. Goudara, Jagadeesh R. Sonnadb and Ronald G. Duggleby (January 1999). "[http://dx.doi.org/10.1016/S0167-4838(98)00247-7 Parameter estimation using a direct solution of the integrated Michaelis-Menten equation]". ''Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology'' '''1429(2)''': 377-383 | ||
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;Guven2007 {{anchor|Guven2007}} | ;Guven2007 {{anchor|Guven2007}} | ||
:Basak Guven and Alan Howarda (September 2007). "[http://dx.doi.org/doi:10.1016/j.ecolmodel.2007.03.024 Identifying the critical parameters of a cyanobacterial growth and movement model by using generalised sensitivity analysis]". ''Ecological Modelling'' '''207(1)''': 11-21 | :Basak Guven and Alan Howarda (September 2007). "[http://dx.doi.org/doi:10.1016/j.ecolmodel.2007.03.024 Identifying the critical parameters of a cyanobacterial growth and movement model by using generalised sensitivity analysis]". ''Ecological Modelling'' '''207(1)''': 11-21 | ||
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;Hoefnagel2002 {{anchor|Hoefnagel2002}} | ;Hoefnagel2002 {{anchor|Hoefnagel2002}} | ||
:M.H.N. Hoefnagel, A. van der Burgt, D.E. Martens, ''et al'' (March 2002). "[http://dx.doi.org/10.1023/A:1020313409954 Time Dependent Responses of Glycolytic Intermediates in a Detailed Glycolytic Model of ''Lactococcus Lactis'' During Glucose Run-Out Experiments]". ''Molecular Biology Reports'' '''29''': 157-161 | :M.H.N. Hoefnagel, A. van der Burgt, D.E. Martens, ''et al'' (March 2002). "[http://dx.doi.org/10.1023/A:1020313409954 Time Dependent Responses of Glycolytic Intermediates in a Detailed Glycolytic Model of ''Lactococcus Lactis'' During Glucose Run-Out Experiments]". ''Molecular Biology Reports'' '''29''': 157-161 | ||
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;Holland2009 {{anchor|Holland2009}} | ;Holland2009 {{anchor|Holland2009}} | ||
:Daryl P. Holland, Anthony E. Walsby (January 2009). "[http://dx.doi.org/10.1016/j.mimet.2009.02.005 Digital recordings of gas-vesicle collapse used to measure turgor pressure and cell–water relations of cyanobacterial cells ]". ''Journal of Microbiological Methods'' '''77''': 214-224 | :Daryl P. Holland, Anthony E. Walsby (January 2009). "[http://dx.doi.org/10.1016/j.mimet.2009.02.005 Digital recordings of gas-vesicle collapse used to measure turgor pressure and cell–water relations of cyanobacterial cells ]". ''Journal of Microbiological Methods'' '''77''': 214-224 | ||
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;Kao2008 {{anchor|Kao2008}} | ;Kao2008 {{anchor|Kao2008}} | ||
:Kao WC, Huang CC, Chang JS (October 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/18313216 Biosorption of nickel, chromium and zinc by MerP-expressing recombinant Escherichia coli.]". '' J Hazard Mater.'' '''158(1)''': 100-106 | :Kao WC, Huang CC, Chang JS (October 2008). "[http://www.ncbi.nlm.nih.gov/pubmed/18313216 Biosorption of nickel, chromium and zinc by MerP-expressing recombinant Escherichia coli.]". '' J Hazard Mater.'' '''158(1)''': 100-106 | ||
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;Kelly2009 {{anchor|Kelly2009}} | ;Kelly2009 {{anchor|Kelly2009}} | ||
:Jason R. Kelly, Adam J. Rubin, Joseph H. Davis, ''et al'' (March 2009). "[http://dx.doi.org/10.1186/1754-1611-3-4 Measuring the activity of BioBrick promoters using an in vivo reference standard]". ''Journal of Biological Engineering'' '''3''': 4 | :Jason R. Kelly, Adam J. Rubin, Joseph H. Davis, ''et al'' (March 2009). "[http://dx.doi.org/10.1186/1754-1611-3-4 Measuring the activity of BioBrick promoters using an in vivo reference standard]". ''Journal of Biological Engineering'' '''3''': 4 | ||
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;Kostal2004 {{anchor|Kostal2004}} | ;Kostal2004 {{anchor|Kostal2004}} | ||
:{{star}} Jan Kostal, Rosanna Yang, Cindy H. Wu, ''et al'' (August 2004). "[http://dx.doi.org/10.1128/AEM.70.8.4582-4587.2004 Enhanced Arsenic Accumulation in Engineered Bacterial Cells Expressing ArsR]". ''Applied and Environmental Microbiology'' 70(8): 4582–4587 | :{{star}} Jan Kostal, Rosanna Yang, Cindy H. Wu, ''et al'' (August 2004). "[http://dx.doi.org/10.1128/AEM.70.8.4582-4587.2004 Enhanced Arsenic Accumulation in Engineered Bacterial Cells Expressing ArsR]". ''Applied and Environmental Microbiology'' 70(8): 4582–4587 | ||
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;Lewinson2009 {{anchor|Lewinson2009}} | ;Lewinson2009 {{anchor|Lewinson2009}} | ||
:Lewinson O, Lee AT, Rees DC. (2009). "[http://www.ncbi.nlm.nih.gov/pubmed/19264958 A P-type ATPase importer that discriminates between essential and toxic transition metals]". '' PNAS'' 106(12): 4677-4682 | :Lewinson O, Lee AT, Rees DC. (2009). "[http://www.ncbi.nlm.nih.gov/pubmed/19264958 A P-type ATPase importer that discriminates between essential and toxic transition metals]". '' PNAS'' 106(12): 4677-4682 | ||
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;Li1998 {{anchor|Li1998}} | ;Li1998 {{anchor|Li1998}} | ||
:{{star}} Ning Li and Maura C. Cannon (May 1998). "Gas Vesicle Genes Identified in Bacillus megaterium and Functional Expression in Escherichia coli". ''Journal of Bacteriology'' '''180(9)''': 2450–2458 | :{{star}} Ning Li and Maura C. Cannon (May 1998). "Gas Vesicle Genes Identified in Bacillus megaterium and Functional Expression in Escherichia coli". ''Journal of Bacteriology'' '''180(9)''': 2450–2458 | ||
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;Lin2007-1 {{anchor|Lin2007-1}} | ;Lin2007-1 {{anchor|Lin2007-1}} | ||
:Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (April 2007). "[http://dx.doi.org/10.1074/jbc.M700886200 ArsD Residues Cys12, Cys13, and Cys18 Form an As(III)-binding Site Required for Arsenic Metallochaperone Activity]". ''The Journal of Biological Chemistry'' '''282(23)''': 16783–16791 | :Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (April 2007). "[http://dx.doi.org/10.1074/jbc.M700886200 ArsD Residues Cys12, Cys13, and Cys18 Form an As(III)-binding Site Required for Arsenic Metallochaperone Activity]". ''The Journal of Biological Chemistry'' '''282(23)''': 16783–16791 | ||
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;Lin2007-2 {{anchor|Lin2007-2}} | ;Lin2007-2 {{anchor|Lin2007-2}} | ||
:Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (December 2007). "[http://dx.doi.org/10.1007/s10863-007-9113-y ArsD: an As(III) metallochaperone for the ArsAB As(III)-translocating ATPase]". ''Journal of Bioenergetics and Biomembranes'' '''39''': 453-458 | :Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (December 2007). "[http://dx.doi.org/10.1007/s10863-007-9113-y ArsD: an As(III) metallochaperone for the ArsAB As(III)-translocating ATPase]". ''Journal of Bioenergetics and Biomembranes'' '''39''': 453-458 | ||
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;Meng2004 {{anchor|Meng2004}} | ;Meng2004 {{anchor|Meng2004}} | ||
:{{star}} Yu-Ling Meng, Zijuan Liu and Barry P. Rosen (February 2004). "[http://dx.doi.org/10.1074/jbc.M400037200 As(III) and Sb(III) Uptake by GlpF and Efflux by ArsB in Escherichia coli]". ''Journal of Biological Chemistry'' '''279''': 18334-18341 | :{{star}} Yu-Ling Meng, Zijuan Liu and Barry P. Rosen (February 2004). "[http://dx.doi.org/10.1074/jbc.M400037200 As(III) and Sb(III) Uptake by GlpF and Efflux by ArsB in Escherichia coli]". ''Journal of Biological Chemistry'' '''279''': 18334-18341 | ||
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;Neves1999 {{anchor|Neves1999}} | ;Neves1999 {{anchor|Neves1999}} | ||
:Ana Rute Neves, Ana Ramos, Marta C. Nunes, ''et al'' (1999). "[http://dx.doi.org/10.1002/(SICI)1097-0290(19990720)64%3A2%3C200%3A%3AAID-BIT9%3E3.0.CO%3B2-K In vivo nuclear magnetic resonance studies of glycolytic kinetics in ''Lactococcus lactis'']". ''Biotechnology and Bioengineering'' '''64''': 200-212 | :Ana Rute Neves, Ana Ramos, Marta C. Nunes, ''et al'' (1999). "[http://dx.doi.org/10.1002/(SICI)1097-0290(19990720)64%3A2%3C200%3A%3AAID-BIT9%3E3.0.CO%3B2-K In vivo nuclear magnetic resonance studies of glycolytic kinetics in ''Lactococcus lactis'']". ''Biotechnology and Bioengineering'' '''64''': 200-212 | ||
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;Ngu2006 {{anchor|Ngu2006}} | ;Ngu2006 {{anchor|Ngu2006}} | ||
:Thanh T. Ngu, M. Stillman (April 2006). "[http://dx.doi.org/10.1021/ja062914c Arsenic Binding to Human Metallothionein]". ''J. Am. Chem. Soc'' '''128 (38)''': 12473–12483 | :Thanh T. Ngu, M. Stillman (April 2006). "[http://dx.doi.org/10.1021/ja062914c Arsenic Binding to Human Metallothionein]". ''J. Am. Chem. Soc'' '''128 (38)''': 12473–12483 | ||
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;Poole1977 {{anchor|Poole1977}} | ;Poole1977 {{anchor|Poole1977}} | ||
:R.K. Poole (1977). "[http://mic.sgmjournals.org/cgi/content/abstract/98/1/177 Fluctuations in Buoyant Density during the Cell Cycle of Escherichia coli K12]". ''Journal of General Microbiology'' '''98''': 177-186 | :R.K. Poole (1977). "[http://mic.sgmjournals.org/cgi/content/abstract/98/1/177 Fluctuations in Buoyant Density during the Cell Cycle of Escherichia coli K12]". ''Journal of General Microbiology'' '''98''': 177-186 | ||
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;Rensing2005 {{anchor|Rensing2005}} | ;Rensing2005 {{anchor|Rensing2005}} | ||
:Christopher Rensing (June 2005). "[http://dx.doi.org/10.1128/JB.187.12.3909-3912.2005 Form and Function in Metal-Dependent Transcriptional Regulation: Dawn of the Enlightenment]". ''Journal of Bacteriology'' '''187(12)''': 3909–3912 | :Christopher Rensing (June 2005). "[http://dx.doi.org/10.1128/JB.187.12.3909-3912.2005 Form and Function in Metal-Dependent Transcriptional Regulation: Dawn of the Enlightenment]". ''Journal of Bacteriology'' '''187(12)''': 3909–3912 | ||
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;Robinson2001 {{anchor|Robinson2001}} | ;Robinson2001 {{anchor|Robinson2001}} | ||
:Nigel J. Robinson, Simon K. Whitehall and Jennifer S. Cavet (2001). "[http://www.ncbi.nlm.nih.gov/pubmed/11407113 Microbial Metallothioneins]". ''Advances in Microbial Physiology'' '''44''': 183-213 | :Nigel J. Robinson, Simon K. Whitehall and Jennifer S. Cavet (2001). "[http://www.ncbi.nlm.nih.gov/pubmed/11407113 Microbial Metallothioneins]". ''Advances in Microbial Physiology'' '''44''': 183-213 | ||
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;Rosen1996 {{anchor|Rosen1996}} | ;Rosen1996 {{anchor|Rosen1996}} | ||
:Barry P. Rosen (August 1996). "[http://dx.doi.org/10.1007/s007750050053 Bacterial resistance to heavy metals and metalloids]". ''Journal of Biological Inorganic Chemistry'' '''1(4)''': 273-277 | :Barry P. Rosen (August 1996). "[http://dx.doi.org/10.1007/s007750050053 Bacterial resistance to heavy metals and metalloids]". ''Journal of Biological Inorganic Chemistry'' '''1(4)''': 273-277 | ||
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;Rosen2009 {{anchor|Rosen2009}} | ;Rosen2009 {{anchor|Rosen2009}} | ||
:Barry P. Rosen and Zijuan Liu (April 2009). "[http://dx.doi.org/10.1016/j.envint.2008.07.023 Transport pathways for arsenic and selenium: A minireview]". ''Environment International'' '''35(3)''': 512-515 | :Barry P. Rosen and Zijuan Liu (April 2009). "[http://dx.doi.org/10.1016/j.envint.2008.07.023 Transport pathways for arsenic and selenium: A minireview]". ''Environment International'' '''35(3)''': 512-515 | ||
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;Schwartz2008 {{anchor|Schwartz2008}} | ;Schwartz2008 {{anchor|Schwartz2008}} | ||
:Russel Schwartz (2008). ''Biological modeling and simulation: a survey of practical models, algorithms, and numerical methods'' MIT Press. ISBN 978-0-262-19584-3 | :Russel Schwartz (2008). ''Biological modeling and simulation: a survey of practical models, algorithms, and numerical methods'' MIT Press. ISBN 978-0-262-19584-3 | ||
+ | |||
;Shi1992 {{anchor|Shi1992}} | ;Shi1992 {{anchor|Shi1992}} | ||
:Jianguo Shi, William P. Lindsay, James W. Huckle (June 1992). "[http://dx.doi.org/10.1016/0014-5793(92)80509-F Cyanobacterial metallothionein gene expressed in Escherichia coli: Metal-binding properties of the expressed protein]". ''FEBS Letters'' '''303(2-3)''': 159-163 | :Jianguo Shi, William P. Lindsay, James W. Huckle (June 1992). "[http://dx.doi.org/10.1016/0014-5793(92)80509-F Cyanobacterial metallothionein gene expressed in Escherichia coli: Metal-binding properties of the expressed protein]". ''FEBS Letters'' '''303(2-3)''': 159-163 | ||
+ | |||
;Singh2008 {{anchor|Singh2008}} | ;Singh2008 {{anchor|Singh2008}} | ||
:Shailendra Singh, Ashok Mulchandani, Wilfred Chen (February 2008). "[http://dx.doi.org/10.1128/AEM.02871-07 Highly Selective and Rapid Arsenic Removal by Metabolically Engineered Escherichia coli Cells Expressing Fucus vesiculosus Metallothionein]". ''MICROBIOLOGY'' '''74(9)''': 2924–2927 | :Shailendra Singh, Ashok Mulchandani, Wilfred Chen (February 2008). "[http://dx.doi.org/10.1128/AEM.02871-07 Highly Selective and Rapid Arsenic Removal by Metabolically Engineered Escherichia coli Cells Expressing Fucus vesiculosus Metallothionein]". ''MICROBIOLOGY'' '''74(9)''': 2924–2927 | ||
+ | |||
;Sivertsen2008 {{anchor|Sivertsen2008}} | ;Sivertsen2008 {{anchor|Sivertsen2008}} | ||
:Astrid C. Sivertsen, Marvin J. Bayro, ''et al'' ( april 2008). "[http://dx.doi.org/doi:10.1016/j.jmb.2009.02.015 Solid-State NMR Evidence for Inequivalent GvpA Subunits in Gas Vesicles]". ''Journal of Molecular Biology'' '''387(4)''': 1032-1039 | :Astrid C. Sivertsen, Marvin J. Bayro, ''et al'' ( april 2008). "[http://dx.doi.org/doi:10.1016/j.jmb.2009.02.015 Solid-State NMR Evidence for Inequivalent GvpA Subunits in Gas Vesicles]". ''Journal of Molecular Biology'' '''387(4)''': 1032-1039 | ||
+ | |||
;Summers2009 {{anchor|Summers2009}} | ;Summers2009 {{anchor|Summers2009}} | ||
:Anne O. Summers (April 2009). "[http://dx.doi.org/10.1016/j.mib.2009.02.003 Damage control: regulating defenses against toxic metals and metalloids]". ''Current Opinion in Microbiology'' '''12(2)''': 138-144 | :Anne O. Summers (April 2009). "[http://dx.doi.org/10.1016/j.mib.2009.02.003 Damage control: regulating defenses against toxic metals and metalloids]". ''Current Opinion in Microbiology'' '''12(2)''': 138-144 | ||
+ | |||
;Tisa1989 {{anchor|Tisa1989}} | ;Tisa1989 {{anchor|Tisa1989}} | ||
:Louis S. Tisa and Barry P. Rosen (January 1990). "[http://www.ncbi.nlm.nih.gov/pubmed/1688427 Molecular characterization of an anion pump. The ArsB protein is the membrane anchor for the ArsA protein]". ''The journal of biological chemistry'' '''265(1)''': 190-194 | :Louis S. Tisa and Barry P. Rosen (January 1990). "[http://www.ncbi.nlm.nih.gov/pubmed/1688427 Molecular characterization of an anion pump. The ArsB protein is the membrane anchor for the ArsA protein]". ''The journal of biological chemistry'' '''265(1)''': 190-194 | ||
+ | |||
;Turner1995 {{anchor|Turner1995}} | ;Turner1995 {{anchor|Turner1995}} | ||
:Jennifer S. Turner, Nigel J. Robinson and Amit Gupta (March 1995). "[http://dx.doi.org/10.1007/BF01569937 Construction of Zn<sup>2+</sup>/Cd<sup>2+</sup>-tolerant cyanobacteria with a modified metallothionein divergon: Further analysis of the function and regulation of ''smt'']". ''Journal of Industrial Microbiology and Biotechnology'' '''14(3-4)''': 259-264 | :Jennifer S. Turner, Nigel J. Robinson and Amit Gupta (March 1995). "[http://dx.doi.org/10.1007/BF01569937 Construction of Zn<sup>2+</sup>/Cd<sup>2+</sup>-tolerant cyanobacteria with a modified metallothionein divergon: Further analysis of the function and regulation of ''smt'']". ''Journal of Industrial Microbiology and Biotechnology'' '''14(3-4)''': 259-264 | ||
+ | |||
;Walsby1979 {{anchor|Walsby1979}} | ;Walsby1979 {{anchor|Walsby1979}} | ||
:A.E. Walsby (April 1979). "[http://dx.doi.org/10.1016/0022-2836(79)90281-X Average thickness of the gas vesicle wall in Anabaena flos-aquae]". ''Journal of Molecular Biology'' '''129(2)''': 279-285 | :A.E. Walsby (April 1979). "[http://dx.doi.org/10.1016/0022-2836(79)90281-X Average thickness of the gas vesicle wall in Anabaena flos-aquae]". ''Journal of Molecular Biology'' '''129(2)''': 279-285 | ||
+ | |||
;Walsby1994 {{anchor|Walsby1994}} | ;Walsby1994 {{anchor|Walsby1994}} | ||
:A.E. Walsby (March 1994). "[http://www.ncbi.nlm.nih.gov/pubmed/8177173 Gas Vesicles]". ''Microbiological reviews'' '''58(1)''': 94-144 | :A.E. Walsby (March 1994). "[http://www.ncbi.nlm.nih.gov/pubmed/8177173 Gas Vesicles]". ''Microbiological reviews'' '''58(1)''': 94-144 | ||
- | |||
;Nawapan2009 {{anchor|Nawapan2009}} | ;Nawapan2009 {{anchor|Nawapan2009}} | ||
:Sirikan Nawapan, Nisanart Charoenlap ''et al'' (August 2009). | :Sirikan Nawapan, Nisanart Charoenlap ''et al'' (August 2009). | ||
"[http://dx.doi.org/10.1046/10.1128/JB.00384-09 Functional and Expression Analyses of the cop Operon, Required for Copper Resistance in Agrobacterium tumefaciens]". ''American Society for Microbiology '''191(16)''': 5159-5168 | "[http://dx.doi.org/10.1046/10.1128/JB.00384-09 Functional and Expression Analyses of the cop Operon, Required for Copper Resistance in Agrobacterium tumefaciens]". ''American Society for Microbiology '''191(16)''': 5159-5168 | ||
+ | |||
;Liu2006 {{anchor|Liu2006}} | ;Liu2006 {{anchor|Liu2006}} | ||
:Tong Liu Arati Ramesh ''et al''(December 2006). "[http://dx.doi.org/10.1038/nchembio844 CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator]". ''Nature Chemical Biology'' '''3''': 60-68 | :Tong Liu Arati Ramesh ''et al''(December 2006). "[http://dx.doi.org/10.1038/nchembio844 CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator]". ''Nature Chemical Biology'' '''3''': 60-68 | ||
+ | |||
;Mills1994 {{anchor|Mills1994}} | ;Mills1994 {{anchor|Mills1994}} | ||
:Scott D. Mills Chun-Keun Lim and Donald A. Cooksey (1994). | :Scott D. Mills Chun-Keun Lim and Donald A. Cooksey (1994). | ||
"[http://dx.doi.org/10.1007/BF00286685 Purification and characterization of CopR, a transcriptional activator protein that binds to a conserved domain (cop box) in copper- inducible promoters of Pseudomonas syringae]". ''Molecular and General Genetics MGG '''244(4)''': 1432-1874 | "[http://dx.doi.org/10.1007/BF00286685 Purification and characterization of CopR, a transcriptional activator protein that binds to a conserved domain (cop box) in copper- inducible promoters of Pseudomonas syringae]". ''Molecular and General Genetics MGG '''244(4)''': 1432-1874 | ||
+ | |||
;Ettema2006 {{anchor|Ettema2006}} | ;Ettema2006 {{anchor|Ettema2006}} | ||
:Thijs J. G. Ettema, Arie B. Brinkman ''et al'' (2006). | :Thijs J. G. Ettema, Arie B. Brinkman ''et al'' (2006). | ||
"[http://dx.doi.org/10.1099/mic.0.28724-0 Molecular characterization of a conserved archaeal copper resistance (cop) gene cluster and its copper-responsive regulator in Sulfolobus solfataricus P2]". ''Microbiology '''152''': 1969-1979 | "[http://dx.doi.org/10.1099/mic.0.28724-0 Molecular characterization of a conserved archaeal copper resistance (cop) gene cluster and its copper-responsive regulator in Sulfolobus solfataricus P2]". ''Microbiology '''152''': 1969-1979 | ||
+ | |||
;Khunajakr1999 {{anchor|Khunajakr1999}} | ;Khunajakr1999 {{anchor|Khunajakr1999}} | ||
:Nongpanga Khunajakr, Chun-Qiang Liu ''et al'' (March 1999). | :Nongpanga Khunajakr, Chun-Qiang Liu ''et al'' (March 1999). | ||
"[http://dx.doi.org/10.1016/S0378-1119(98)00395-3 | "[http://dx.doi.org/10.1016/S0378-1119(98)00395-3 | ||
A plasmid-encoded two-component regulatory system involved in copper-inducible transcription in Lactococcus lactis]". ''Gene'''229(1-1)''': 229-235 | A plasmid-encoded two-component regulatory system involved in copper-inducible transcription in Lactococcus lactis]". ''Gene'''229(1-1)''': 229-235 | ||
+ | |||
;Kloosterman2008 {{anchor|Kloosterman2008}} | ;Kloosterman2008 {{anchor|Kloosterman2008}} | ||
:Tomas G. Kloosterman, Robert M. Witwicki ''et al'' (2008). | :Tomas G. Kloosterman, Robert M. Witwicki ''et al'' (2008). | ||
"[http://dx.doi.org/10.1128/JB.00307-08 Opposite Effects of Mn2+ and Zn2+ on PsaR-Mediated Expression of the Virulence Genes pcpA, prtA, and psaBCA of Streptococcus pneumonia]". ''J Bacterio'''190(15)''': 5382–5393 | "[http://dx.doi.org/10.1128/JB.00307-08 Opposite Effects of Mn2+ and Zn2+ on PsaR-Mediated Expression of the Virulence Genes pcpA, prtA, and psaBCA of Streptococcus pneumonia]". ''J Bacterio'''190(15)''': 5382–5393 | ||
- | |||
- | |||
- | |||
- | |||
;Moore2005 {{anchor|Moore2005}} | ;Moore2005 {{anchor|Moore2005}} | ||
Line 221: | Line 270: | ||
"[http://dx.doi.org/10.1128/JB.00307-08 Opposite Effects of Mn2+ and Zn2+ on PsaR-Mediated Expression of the Virulence Genes pcpA, prtA, and psaBCA of Streptococcus pneumonia]". | "[http://dx.doi.org/10.1128/JB.00307-08 Opposite Effects of Mn2+ and Zn2+ on PsaR-Mediated Expression of the Virulence Genes pcpA, prtA, and psaBCA of Streptococcus pneumonia]". | ||
''Molecular Microbiology'''57(1)''': 27-40 | ''Molecular Microbiology'''57(1)''': 27-40 | ||
- | |||
- | |||
;Tong Liu2008 {{anchor|Tong Liu2008}} | ;Tong Liu2008 {{anchor|Tong Liu2008}} | ||
Line 234: | Line 281: | ||
"[http://dx.doi.org/10.1074/jbc.M310560200 A Novel Cyanobacterial SmtB/ArsR Family Repressor Regulates the Expression of a CPx-ATPase and a Metallothionein in Response to Both Cu(I)/Ag(I) and Zn(II)/Cd(II)]". | "[http://dx.doi.org/10.1074/jbc.M310560200 A Novel Cyanobacterial SmtB/ArsR Family Repressor Regulates the Expression of a CPx-ATPase and a Metallothionein in Response to Both Cu(I)/Ag(I) and Zn(II)/Cd(II)]". | ||
''The Journal of Biological Chemistry, '''2004''', Vol. 279, No. 17, 17810–17818. | ''The Journal of Biological Chemistry, '''2004''', Vol. 279, No. 17, 17810–17818. | ||
- | |||
;Summers2009 {{anchor|Summers2009}} | ;Summers2009 {{anchor|Summers2009}} | ||
- | :Summers A.O. | + | :Summers A.O. (March 2009) |
"[http://dx.doi.org/10.1016/j.mib.2009.02.003 Damage control: regulating defenses against toxic metals and metalloids]". | "[http://dx.doi.org/10.1016/j.mib.2009.02.003 Damage control: regulating defenses against toxic metals and metalloids]". | ||
''Current Opinion in Microbiology, '''2009''', 12, 138–144. | ''Current Opinion in Microbiology, '''2009''', 12, 138–144. | ||
- | |||
;Hirose2006 {{anchor|Hirose2006}} | ;Hirose2006 {{anchor|Hirose2006}} | ||
- | :Hirose K, Ezaki B, Tong L Nakashima S, ''et al'' | + | :Hirose K, Ezaki B, Tong L Nakashima S, ''et al'' (August 2005) |
- | + | "[http://dx.doi.org/10.1016/j.toxlet.2005.11.008 Diamide stress induces a metallothionein BmtA through a repressor BxmR and is modulated by Zn-inducible BmtA in the cyanobacterium Oscillatoria brevis]". | |
- | Toxicology Letters, '''2006''', 163, 250–256. | + | ''Toxicology Letters, '''2006''', 163, 250–256. |
;Chen2008 {{anchor|Chen2008}} | ;Chen2008 {{anchor|Chen2008}} | ||
- | + | :Chen P.R. & He C., (March 2008) | |
- | + | "[http://dx.doi.org/10.1016/j.cbpa.2007.12.010 Selective recognition of metal ions by metalloregulatory proteins'', | |
- | Current Opinion in Chemical Biology | + | ''Current Opinion in Chemical Biology}". '''2008''', 12, 214–221. |
;Pennella2005 {{anchor|Pennella2005}} | ;Pennella2005 {{anchor|Pennella2005}} | ||
- | + | :Pennella M.A. & Giedroc D.P., (August 2005) | |
- | + | "[http://dx.doi.org/10.1007/s10534-005-3716-8 Structural determinants of metal selectivity in prokaryotic metal-responsive transcriptional regulator]". | |
- | BioMetals, '''2005''', 18, 413–428. | + | ''BioMetals, '''2005''', 18, 413–428. |
- | ; | + | ;Catini2008 {{anchor|Catini2008}} |
- | + | :Cantini F., Banci L. & Solioz M., (October 2008) | |
- | + | "[http://dx.doi.org/10.1042/BJ20081713 The copper-responsive repressor CopR of Lactococcus lactis is a ‘winged helix’ protein]". | |
- | Biochem. J., '''2009''', 417, 493–499. | + | ''Biochem. J., '''2009''', 417, 493–499. |
;Busenlehner2003 {{anchor|Busenlehner2003}} | ;Busenlehner2003 {{anchor|Busenlehner2003}} | ||
- | + | :Busenlehner L.S., Pennella M.A. & Giedroc D.P., (June 2003) | |
- | + | "[http://dx.doi.org/10.1155/2006/837139 The SmtB/ArsR family of metalloregulatory transcriptional repressors: structural insights into prokaryotic metal resistance]". | |
- | FEMS Microbiology Reviews, '''2003''', 27, 131-143. | + | ''FEMS Microbiology Reviews, '''2003''', 27, 131-143. |
;Thelwell1998 {{anchor|Thelwell1998}} | ;Thelwell1998 {{anchor|Thelwell1998}} | ||
- | + | :Thelwell C., Robinson N.J. & Turner-Cavet J.S., | |
- | + | "[http://dx.doi.org/10.1073/pnas.95.18.10728 An SmtB-like repressor from Synechocystis PCC 6803 regulates a zinc exporter]". | |
- | Proc. Natl. Acad. Sci. USA, '''1998''', Vol. 95, 10728–10733. | + | ''Proc. Natl. Acad. Sci. USA, '''1998''', Vol. 95, 10728–10733. |
Revision as of 11:34, 12 August 2009
Literature
|
---|
Currently many references are connected to the paragraph its information has been used.
Our metal related literature by subject:
Cu | Zn | As | Cd | Sb | Hg | ||
---|---|---|---|---|---|---|---|
Importers | GlpF | Meng2004, Rosen2009 | Meng2004 | ||||
HmtA | |||||||
Exporters | ArsB | Tisa1989, Carlin1995, | Tisa1989, Carlin1995, Rosen1996, Meng2004, Summers2009 | ||||
Accumulators | ArsR | Carlin1995, Rosen1996, Chen1997, Kostal2004, Rensing2005, Summers2009 | Carlin1995, Rosen1996, Summers2009 | ||||
ArsD | Chen1997, Lin2007-1/2, Summers2009 | Chen1997, Lin2007-1/2, Summers2009 | |||||
SmtA | Shi1992 | Shi1992, Turner1995, Robinson2001, Blindauer2002 | Shi1992 | Shi1992 | |||
MymT | |||||||
MT | Ngu2006,Singh2008 | ||||||
Promoters |
- Alon2007
- Uri Alon (2007). Introduction to systems biology: design principles of biological circuits Chapman & Hall/CRC. ISBN 978-1-58488-642-6
- Baldwin1995
- W.W. Baldwin, Richard Myer, Nicole Powell, et al (August 1995). "Buoyant density of Escherichia coli is determined solely by the osmolarity of the culture medium". Archives of Microbiology 164(2): 155-157
- Beyer2004
- Andreas Beyer, Jens Hollunder, Heinz-Peter Nasheuer and Thomas Wilhelm (August 2004). "Post-transcriptional Expression Regulation in the Yeast Saccharomyces cerevisiae on a Genomic Scale". Molecular & Cellular Proteomics 3: 1083-1092
- Blancato2006
- Blancato VS, Magni C, Lolkema JS. (October 2006). "Functional characterization and Me ion specificity of a Ca-citrate transporter from Enterococcus faecalis". FEBS journal 273(22): 5121-5130
- Bowen1965
- C.C. Bowen and T.E. Jensen ( March 1965). "Blue-Green Algae: Fine Structure of the Gas Vacuoles". Science 147(3664): 1460 - 1462
- Blindauer2002
- Claudia A. Blindauer, Mark D. Harrison, Andrea K. Robinson, et al (2002). "Multiple bacteria encode metallothioneins and SmtA-like zinc fingers". Molecular Microbiology 45(5): 1421-1432
- Blindauer2001
- Blindauer CA, Harrison MD, et al (2001). "[2] A metallothionein containing a zinc finger within a four-metal cluster protects a bacterium from zinc toxicity.". Proc Natl Acad Sci USA. 98(17): ):9593-9598
- Bylund1991
- J.E. Bylund, M.A. Haines, K. Walsh, et al (September 1991). "Buoyant density studies of several mecillinam-resistant and division mutants of Escherichia coli". Journal of Bacteriology 173(17): 5396-5402
- Brady1994
- Brady D, Rose PD, Duncan JR. (1994). "The use of hollow fiber cross-flow microfiltration in bioaccumulation and continuous removal of heavy metals from solution by Saccharomyces cerevisiae.". Biotechnol Bioeng. 44(11):1362-1366
- Cadosch2008
- Cadosch D, Meagher J, Gautschi OP, Filgueira L. (December 2008). "Uptake and intracellular distribution of various metal ions in human monocyte-derived dendritic cells detected by Newport Green DCF diacetate ester". Journal Neurosci Methods. 178(1):182-187
- Carlin1995
- Arthur Carlin, Weiping Shi, Saibal Dey and Barry P. Rosen (February 1995). "The ars Operon of Escherichia coli Confers Arsenical and Antimonial Resistance". Journal of Bacteriology 177(4): 981-986
- Chen1997
- Yanxiang Chen and Barry P. Rosen (May 1997). "Metalloregulatory Properties of the ArsD Repressor". The Journal of Biological Chemistry 272(22): 14257-14262
- Chen1997-2
- Chen S, Wilson DB. (1997). "Genetic engineering of bacteria and their potential for Hg2+ bioremediation ". Biodegradation 8(2): 97-103
- Chen1998
- Chen S, Kim E, Shuler ML, Wilson DB. (1998). "Hg2+ removal by genetically engineered Escherichia coli in a hollow fiber bioreactor". Biotechnol Prog. 14(5):667-671
- Chang1998
- Chang CC, Liao WF, Huang PC. (1998). "Cysteine contributions to metal binding preference for Zn/Cd in the beta-domain of metallothionein". Protein Eng. 11(1):42-46
- Deng2003
- Deng X, Li QB, Lu YH, Sun DH, Huang YL, Chen XR. (2003). "Bioaccumulation of nickel from aqueous solutions by genetically engineered Escherichia coli.". Water Res. 37(10):2505-2511
- Deng2007
- Deng X, Yi XE, Liu G. (2007). "Cadmium removal from aqueous solution by gene-modified Escherichia coli JM109". Journal Hazard Mater. 139(2):340-344
- Deng2008
- Deng X, Hu ZL, Yi XE. (May 2008). "Continuous treatment process of mercury removal from aqueous solution by growing recombinant E. coli cells and modeling study". Journal Hazard Mater. 153(1-2):487-492
- Dey1995
- Saibal Dey, Barry P. Rosen (1995). "Dual Mode of Energy Coupling by the Oxyanion Translocating ArsB Protein". JOURNAL OF BACTERIOLOGY 177(2): 385–389
- Fowler1987
- Fowler BA. (1987). "Intracellular compartmentation of metals in aquatic organisms: roles in mechanisms of cell injury". Environ Health Perspect. 7(1): 121-128
- Gilchrist2007
- Michael A. Gilchrist (2007). "Combining Models of Protein Translation and Population Genetics to Predict Protein Production Rates from Codon Usage Patterns". Molecular Biology and Evolution 24(11): 2362-2372
- Gold2008
- Gold B, Deng H, et al(2008). "Identification of a copper-binding metallothionein in pathogenic mycobacteria". Nat Chem Biol. 4(10): 609-616
- Goudar1999
- Chetan T. Goudara, Jagadeesh R. Sonnadb and Ronald G. Duggleby (January 1999). "Parameter estimation using a direct solution of the integrated Michaelis-Menten equation". Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology 1429(2): 377-383
- Guven2007
- Basak Guven and Alan Howarda (September 2007). "Identifying the critical parameters of a cyanobacterial growth and movement model by using generalised sensitivity analysis". Ecological Modelling 207(1): 11-21
- Hoefnagel2002
- M.H.N. Hoefnagel, A. van der Burgt, D.E. Martens, et al (March 2002). "Time Dependent Responses of Glycolytic Intermediates in a Detailed Glycolytic Model of Lactococcus Lactis During Glucose Run-Out Experiments". Molecular Biology Reports 29: 157-161
- Holland2009
- Daryl P. Holland, Anthony E. Walsby (January 2009). "Digital recordings of gas-vesicle collapse used to measure turgor pressure and cell–water relations of cyanobacterial cells ". Journal of Microbiological Methods 77: 214-224
- Kao2008
- Kao WC, Huang CC, Chang JS (October 2008). "Biosorption of nickel, chromium and zinc by MerP-expressing recombinant Escherichia coli.". J Hazard Mater. 158(1): 100-106
- Kelly2009
- Jason R. Kelly, Adam J. Rubin, Joseph H. Davis, et al (March 2009). "Measuring the activity of BioBrick promoters using an in vivo reference standard". Journal of Biological Engineering 3: 4
- Kostal2004
- Jan Kostal, Rosanna Yang, Cindy H. Wu, et al (August 2004). "Enhanced Arsenic Accumulation in Engineered Bacterial Cells Expressing ArsR". Applied and Environmental Microbiology 70(8): 4582–4587
- Lewinson2009
- Lewinson O, Lee AT, Rees DC. (2009). "A P-type ATPase importer that discriminates between essential and toxic transition metals". PNAS 106(12): 4677-4682
- Li1998
- Ning Li and Maura C. Cannon (May 1998). "Gas Vesicle Genes Identified in Bacillus megaterium and Functional Expression in Escherichia coli". Journal of Bacteriology 180(9): 2450–2458
- Lin2007-1
- Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (April 2007). "ArsD Residues Cys12, Cys13, and Cys18 Form an As(III)-binding Site Required for Arsenic Metallochaperone Activity". The Journal of Biological Chemistry 282(23): 16783–16791
- Lin2007-2
- Yung-Feng Lin, Jianbo Yang and Barry P. Rosen (December 2007). "ArsD: an As(III) metallochaperone for the ArsAB As(III)-translocating ATPase". Journal of Bioenergetics and Biomembranes 39: 453-458
- Meng2004
- Yu-Ling Meng, Zijuan Liu and Barry P. Rosen (February 2004). "As(III) and Sb(III) Uptake by GlpF and Efflux by ArsB in Escherichia coli". Journal of Biological Chemistry 279: 18334-18341
- Neves1999
- Ana Rute Neves, Ana Ramos, Marta C. Nunes, et al (1999). "In vivo nuclear magnetic resonance studies of glycolytic kinetics in Lactococcus lactis". Biotechnology and Bioengineering 64: 200-212
- Ngu2006
- Thanh T. Ngu, M. Stillman (April 2006). "Arsenic Binding to Human Metallothionein". J. Am. Chem. Soc 128 (38): 12473–12483
- Poole1977
- R.K. Poole (1977). "Fluctuations in Buoyant Density during the Cell Cycle of Escherichia coli K12". Journal of General Microbiology 98: 177-186
- Rensing2005
- Christopher Rensing (June 2005). "Form and Function in Metal-Dependent Transcriptional Regulation: Dawn of the Enlightenment". Journal of Bacteriology 187(12): 3909–3912
- Robinson2001
- Nigel J. Robinson, Simon K. Whitehall and Jennifer S. Cavet (2001). "Microbial Metallothioneins". Advances in Microbial Physiology 44: 183-213
- Rosen1996
- Barry P. Rosen (August 1996). "Bacterial resistance to heavy metals and metalloids". Journal of Biological Inorganic Chemistry 1(4): 273-277
- Rosen2009
- Barry P. Rosen and Zijuan Liu (April 2009). "Transport pathways for arsenic and selenium: A minireview". Environment International 35(3): 512-515
- Schwartz2008
- Russel Schwartz (2008). Biological modeling and simulation: a survey of practical models, algorithms, and numerical methods MIT Press. ISBN 978-0-262-19584-3
- Shi1992
- Jianguo Shi, William P. Lindsay, James W. Huckle (June 1992). "Cyanobacterial metallothionein gene expressed in Escherichia coli: Metal-binding properties of the expressed protein". FEBS Letters 303(2-3): 159-163
- Singh2008
- Shailendra Singh, Ashok Mulchandani, Wilfred Chen (February 2008). "Highly Selective and Rapid Arsenic Removal by Metabolically Engineered Escherichia coli Cells Expressing Fucus vesiculosus Metallothionein". MICROBIOLOGY 74(9): 2924–2927
- Sivertsen2008
- Astrid C. Sivertsen, Marvin J. Bayro, et al ( april 2008). "Solid-State NMR Evidence for Inequivalent GvpA Subunits in Gas Vesicles". Journal of Molecular Biology 387(4): 1032-1039
- Summers2009
- Anne O. Summers (April 2009). "Damage control: regulating defenses against toxic metals and metalloids". Current Opinion in Microbiology 12(2): 138-144
- Tisa1989
- Louis S. Tisa and Barry P. Rosen (January 1990). "Molecular characterization of an anion pump. The ArsB protein is the membrane anchor for the ArsA protein". The journal of biological chemistry 265(1): 190-194
- Turner1995
- Jennifer S. Turner, Nigel J. Robinson and Amit Gupta (March 1995). "Construction of Zn2+/Cd2+-tolerant cyanobacteria with a modified metallothionein divergon: Further analysis of the function and regulation of smt". Journal of Industrial Microbiology and Biotechnology 14(3-4): 259-264
- Walsby1979
- A.E. Walsby (April 1979). "Average thickness of the gas vesicle wall in Anabaena flos-aquae". Journal of Molecular Biology 129(2): 279-285
- Walsby1994
- A.E. Walsby (March 1994). "Gas Vesicles". Microbiological reviews 58(1): 94-144
- Nawapan2009
- Sirikan Nawapan, Nisanart Charoenlap et al (August 2009).
"Functional and Expression Analyses of the cop Operon, Required for Copper Resistance in Agrobacterium tumefaciens". American Society for Microbiology 191(16): 5159-5168
- Liu2006
- Tong Liu Arati Ramesh et al(December 2006). "CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator". Nature Chemical Biology 3: 60-68
- Mills1994
- Scott D. Mills Chun-Keun Lim and Donald A. Cooksey (1994).
"Purification and characterization of CopR, a transcriptional activator protein that binds to a conserved domain (cop box) in copper- inducible promoters of Pseudomonas syringae". Molecular and General Genetics MGG 244(4): 1432-1874
- Ettema2006
- Thijs J. G. Ettema, Arie B. Brinkman et al (2006).
"Molecular characterization of a conserved archaeal copper resistance (cop) gene cluster and its copper-responsive regulator in Sulfolobus solfataricus P2". Microbiology 152: 1969-1979
- Khunajakr1999
- Nongpanga Khunajakr, Chun-Qiang Liu et al (March 1999).
"[http://dx.doi.org/10.1016/S0378-1119(98)00395-3 A plasmid-encoded two-component regulatory system involved in copper-inducible transcription in Lactococcus lactis]". Gene229(1-1): 229-235
- Kloosterman2008
- Tomas G. Kloosterman, Robert M. Witwicki et al (2008).
"Opposite Effects of Mn2+ and Zn2+ on PsaR-Mediated Expression of the Virulence Genes pcpA, prtA, and psaBCA of Streptococcus pneumonia". J Bacterio190(15): 5382–5393
- Moore2005
- Charles M. Moore, Ahmed Gaballa et al (May 2005).
"Opposite Effects of Mn2+ and Zn2+ on PsaR-Mediated Expression of the Virulence Genes pcpA, prtA, and psaBCA of Streptococcus pneumonia". Molecular Microbiology57(1): 27-40
- Tong Liu2008
- Tong Liu, Xiaohua Chen, Zhen Ma, et al (September 2008)
"A CuI-sensing ArsR family Metal Sensor Protein with a Relaxed Metal Selectivity Profile". Biochemistry, 2008, 47(40), 10564–10575.
- Tong Liu2004
- Tong Liu, Susumu Nakashima et al (April 2004)
"A Novel Cyanobacterial SmtB/ArsR Family Repressor Regulates the Expression of a CPx-ATPase and a Metallothionein in Response to Both Cu(I)/Ag(I) and Zn(II)/Cd(II)". The Journal of Biological Chemistry, 2004, Vol. 279, No. 17, 17810–17818.
- Summers2009
- Summers A.O. (March 2009)
"Damage control: regulating defenses against toxic metals and metalloids". Current Opinion in Microbiology, 2009, 12, 138–144.
- Hirose2006
- Hirose K, Ezaki B, Tong L Nakashima S, et al (August 2005)
"Diamide stress induces a metallothionein BmtA through a repressor BxmR and is modulated by Zn-inducible BmtA in the cyanobacterium Oscillatoria brevis". Toxicology Letters, 2006, 163, 250–256.
- Chen2008
- Chen P.R. & He C., (March 2008)
"[http://dx.doi.org/10.1016/j.cbpa.2007.12.010 Selective recognition of metal ions by metalloregulatory proteins, Current Opinion in Chemical Biology}". 2008, 12, 214–221.
- Pennella2005
- Pennella M.A. & Giedroc D.P., (August 2005)
"Structural determinants of metal selectivity in prokaryotic metal-responsive transcriptional regulator". BioMetals, 2005, 18, 413–428.
- Catini2008
- Cantini F., Banci L. & Solioz M., (October 2008)
"The copper-responsive repressor CopR of Lactococcus lactis is a ‘winged helix’ protein". Biochem. J., 2009, 417, 493–499.
- Busenlehner2003
- Busenlehner L.S., Pennella M.A. & Giedroc D.P., (June 2003)
"The SmtB/ArsR family of metalloregulatory transcriptional repressors: structural insights into prokaryotic metal resistance". FEMS Microbiology Reviews, 2003, 27, 131-143.
- Thelwell1998
- Thelwell C., Robinson N.J. & Turner-Cavet J.S.,
"An SmtB-like repressor from Synechocystis PCC 6803 regulates a zinc exporter". Proc. Natl. Acad. Sci. USA, 1998, Vol. 95, 10728–10733.
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