Team:Southampton/Project/Protocols
From 2009.igem.org
(Difference between revisions)
m |
m |
||
(35 intermediate revisions not shown) | |||
Line 6: | Line 6: | ||
<title>University of Southampton | <title>University of Southampton | ||
Wiki</title> | Wiki</title> | ||
+ | <link rel="stylesheet" href="http://www.personal.soton.ac.uk/jeh2v07/css/lightbox.css" type="text/css" media="screen" /> | ||
+ | <link rel="stylesheet" href="http://www.personal.soton.ac.uk/jeh2v07/css/menu.css" type="text/css"/> | ||
+ | <link rel="stylesheet" href="http://www.personal.soton.ac.uk/jeh2v07/css/style.css" type="text/css"/> | ||
<style type= "text/css"> | <style type= "text/css"> | ||
+ | /*TOOLBAR*/ | ||
+ | #toolbar { | ||
+ | position:absolute; | ||
+ | left:-2px; | ||
+ | top:0px; | ||
+ | width:978px; | ||
+ | height:27px; | ||
+ | z-index:100; | ||
+ | } | ||
/*FOOTERPUSH*/ | /*FOOTERPUSH*/ | ||
#footerpush { | #footerpush { | ||
width:1px; | width:1px; | ||
- | height: | + | height:1457px; |
} | } | ||
html, body { | html, body { | ||
Line 21: | Line 33: | ||
} | } | ||
#maincont{ | #maincont{ | ||
- | position:absolute; | + | position:absolute; |
- | left:0px; | + | left:0px; |
- | top:296px; | + | top:296px; |
- | width:975px; | + | width:975px; |
- | height:1200px; | + | height:1200px; |
- | background-image:url('http://www.personal.soton.ac.uk/jeh2v07/images/bg.gif'); | + | background-image:url('http://www.personal.soton.ac.uk/jeh2v07/images/bg.gif'); |
- | background-repeat:repeat-y; | + | background-repeat:repeat-y; |
- | + | margin: 0; | |
- | + | padding: 0; | |
+ | color: #5D5D5D; | ||
} | } | ||
#sufooter { | #sufooter { | ||
position:absolute; | position:absolute; | ||
left:116px; | left:116px; | ||
- | top: | + | top:1495px; |
z-index:150; | z-index:150; | ||
color: #333; | color: #333; | ||
Line 46: | Line 59: | ||
z-index:100; | z-index:100; | ||
} | } | ||
- | + | #maincont div #Table_01 { | |
- | # | + | color: #5D5D5D; |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | # | + | |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | color: # | + | |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
} | } | ||
- | |||
- | |||
- | |||
</style> | </style> | ||
+ | <script type="text/javascript" src="http://www.personal.soton.ac.uk/jeh2v07/js/prototype.js"></script> | ||
+ | <script type="text/javascript" src="http://www.personal.soton.ac.uk/jeh2v07/js/scriptaculous.js?load=effects,builder"></script> | ||
+ | <script type="text/javascript" src="http://www.personal.soton.ac.uk/jeh2v07/js/lightbox.js"></script> | ||
</head> | </head> | ||
<body style="color: rgb(0, 0, 0); background-color: #919191;" | <body style="color: rgb(0, 0, 0); background-color: #919191;" | ||
link="#000099" alink="#000099" vlink="#990099"><div id="footerpush"></div> | link="#000099" alink="#000099" vlink="#990099"><div id="footerpush"></div> | ||
<div id="banner"><img style="width: 975px; height: 276px;" id="banner" | <div id="banner"><img style="width: 975px; height: 276px;" id="banner" | ||
- | src="http://www.personal.soton.ac.uk/jeh2v07/images/ | + | src="http://www.personal.soton.ac.uk/jeh2v07/images/white.jpg" alt="" /></div> |
<div id="toolbar"> | <div id="toolbar"> | ||
<ul class="cssMenu cssMenum"> | <ul class="cssMenu cssMenum"> | ||
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton">Home</a></li> | |
- | href="https://2009.igem.org/Team:Southampton"> | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project"><span>Project</span><![if gt IE 6]></a><![endif]><!--[if lte IE 6]><table><tr><td><![endif]--> |
- | + | <ul class=" cssMenum"> | |
- | href="https://2009.igem.org/Team:Southampton/Project">Project</a></li> | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Aims">Project Aims</a></li> |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Intro">Project Introduction</a></li> | |
- | href="https://2009.igem.org/Team:Southampton/ | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project">Project Description</a></li> |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Achievements">Project Achievements</a></li> | |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Projection">Project Projection</a></li> | |
- | href="https://2009.igem.org/Team:Southampton/Team">< | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Safety">Project Safety</a></li> |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Refer">References and Links</a></li> | |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols"><span>Protocols</span><![if gt IE 6]></a><![endif]><!--[if lte IE 6]><table><tr><td><![endif]--> | |
- | href="https://2009.igem.org/Team:Southampton/Team/Gallery">Gallery</a></li> | + | <ul class=" cssMenum"> |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols">Protocol Overview</a></li> | |
- | <!--[if lte IE 6]></td></tr></table></a><![endif]--></li> | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/Theory1">Protocol Theory</a></li> |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/Transformation">Biobrick Transformation</a></li> | |
- | href="https://2009.igem.org/Team:Southampton/Modeling">Modelling</a></li> | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/ColonyPCR">Colony PCR</a></li> |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/DoubleDigestion">DNA Double Digestion</a></li> | |
- | href="https://2009.igem.org/Team:Southampton/Notebook">Notebook</a></li> | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/Gel">Gel Electrophoresis</a></li> |
- | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/Hfpcr">High Fidelity PCR</a></li> | |
- | href="https://2009.igem.org/Team:Southampton/Sponsors">Sponsors</a></li> | + | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/LBplates">LB Plates</a></li> |
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/Ligation">Ligation</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/Ligationtransformation">Ligation Transformation</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/PlasmidPrep">Plasmid Preparation</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Project/Protocols/TA">TA Cloning</a></li> | ||
+ | </ul> | ||
+ | <!--[if lte IE 6]></td></tr></table></a><![endif]--></li> | ||
+ | </ul> | ||
+ | <!--[if lte IE 6]></td></tr></table></a><![endif]--></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="#">Biobrick Parts<![if gt IE 6]></a><![endif]><!--[if lte IE 6]><table><tr><td><![endif]--> | ||
+ | <ul class=" cssMenum"> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Parts/GoL">Game of Life</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Parts/RPS">Rock Paper Scissors</a></li> | ||
+ | </ul></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Team"><span>Team</span><![if gt IE 6]></a><![endif]><!--[if lte IE 6]><table><tr><td><![endif]--> | ||
+ | <ul class=" cssMenum"> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Team">Team Profiles</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Team/Advisors">Advisor Profiles</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Team/Southampton">Southampton Profile</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Team/University">University Profile</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Team/Gallery">Gallery</a></li> | ||
+ | </ul> | ||
+ | <!--[if lte IE 6]></td></tr></table></a><![endif]--></li> | ||
+ | |||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Modeling"><span>Modelling</span><![if gt IE 6]></a><![endif]><!--[if lte IE 6]><table><tr><td><![endif]--> | ||
+ | <ul class=" cssMenum"> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Modeling">Modelling Overview</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Modeling/GoL">Game Of Life</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Modeling/RPS">Rock Paper Scissors</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Modeling/Open">Open Access</a></li> | ||
+ | </ul> | ||
+ | <!--[if lte IE 6]></td></tr></table></a><![endif]--></li> | ||
+ | |||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/HP"><span>Human Practices</span><![if gt IE 6]></a><![endif]><!--[if lte IE 6]><table><tr><td><![endif]--> | ||
+ | <ul class=" cssMenum"> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/HP">Overview</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/HP/Outreach">Outreach</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/HP/igemexper">iGEM Experience</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/HP/Political">Political Awareness</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/HP/Legacy">Our Legacy</a></li> | ||
+ | </ul> | ||
+ | <!--[if lte IE 6]></td></tr></table></a><![endif]--></li> | ||
+ | |||
+ | |||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Notebook">Notebook</a><![endif]><!--[if lte IE 6]><table><tr><td><![endif]--> | ||
+ | <ul class=" cssMenum"> | ||
+ | |||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Notebook">Notebook</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Notebook/Labbook">Lab Book</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Notebook/Advisorblog">Advisor Blog</a></li> | ||
+ | </ul> | ||
+ | <!--[if lte IE 6]></td></tr></table></a><![endif]--></li> | ||
+ | |||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Sponsors"><span>Acknowledgments</span><![if gt IE 6]></a><![endif]><!--[if lte IE 6]><table><tr><td><![endif]--> | ||
+ | <ul class=" cssMenum"> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Sponsors">Sponsors</a></li> | ||
+ | <li class=" cssMenui"><a class=" cssMenui" href="https://2009.igem.org/Team:Southampton/Southampton">Team Southampton</a></li> | ||
+ | </ul> | ||
+ | <!--[if lte IE 6]></td></tr></table></a><![endif]--></li> | ||
</ul> | </ul> | ||
</div> | </div> | ||
Line 452: | Line 158: | ||
<img style="width: 63px; height: 63px;" alt="" src="http://www.personal.soton.ac.uk/jeh2v07/images/logobox.jpg" /></div> | <img style="width: 63px; height: 63px;" alt="" src="http://www.personal.soton.ac.uk/jeh2v07/images/logobox.jpg" /></div> | ||
<div id="projectheading"> | <div id="projectheading"> | ||
- | < | + | <h1>Protocol Map</h1> |
</div> | </div> | ||
<div id="maincont"> | <div id="maincont"> | ||
Line 461: | Line 167: | ||
<h3>As part of the preparation for iGEM 2009, we have peformed a number of experimental processes which are detailed in protocols. We are making these protocols available on our wiki to help future teams in their synthetic approach. These protocols can be accesed together with an explanation of the theoretical basis using the links embedded in the diagram below:</h3> | <h3>As part of the preparation for iGEM 2009, we have peformed a number of experimental processes which are detailed in protocols. We are making these protocols available on our wiki to help future teams in their synthetic approach. These protocols can be accesed together with an explanation of the theoretical basis using the links embedded in the diagram below:</h3> | ||
</blockquote> | </blockquote> | ||
- | <table width=" | + | <table width="854" border="0" align="left" cellpadding="0" cellspacing="0" id="Table_01" style="left: 75px; position: absolute; background:5D5D5D" name="Table_01"> |
<tr> | <tr> | ||
- | <td colspan=" | + | <td colspan="10" bgcolor="#5D5D5D"> |
<img id="Untitled_1_01" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_01.gif" width="822" height="78" alt="" /></td> | <img id="Untitled_1_01" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_01.gif" width="822" height="78" alt="" /></td> | ||
- | <td> | + | <td width="10" bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="78" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="78" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td rowspan="20"> | + | <td width="45" rowspan="20" bgcolor="#5D5D5D"> |
- | <img | + | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_02.gif" alt="" width="45" height="905" border="0" id="Untitled_1_02" /></td> |
- | <td colspan="3"> | + | <td colspan="3" bgcolor="#5D5D5D"> |
- | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/trans.gif" width="338" height="84" rel="lightbox" title="Transformation"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_03.gif" width="338" height="84" border="0" /></a></td> | + | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/trans.gif" width="338" height="84" rel="lightbox[pro]" title="Transformation - Single plasmids are introduced into recipient bacterial cells. The cells are allowed to replicate in order to achieve high yields of plasmid DNA."><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_03.gif" width="338" height="84" border="0" /></a></td> |
- | <td colspan=" | + | <td colspan="6" rowspan="8" bgcolor="#5D5D5D"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_04.gif" alt="" name="Untitled_1_04" width="439" height="407" border="0" id="Untitled_1_04" /></td> |
- | + | <td bgcolor="#5D5D5D"> | |
- | <td> | + | |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="84" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="84" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td> | + | <td width="162" bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Theory1#transformation"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_05.gif" alt="" name="Untitled_1_05" width="162" height="32" border="0" id="Untitled_1_05" /></a></td> |
- | + | <td colspan="2" bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Transformation"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_06.gif" alt="" name="Untitled_1_06" width="176" height="32" border="0" id="Untitled_1_06" /></a></td> | |
- | <td colspan="2"> | + | <td bgcolor="#5D5D5D"> |
- | + | ||
- | + | ||
- | <td> | + | |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="32" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="32" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="3"> | + | <td colspan="3" bgcolor="#5D5D5D"> |
<img id="Untitled_1_07" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_07.gif" width="338" height="58" alt="" /></td> | <img id="Untitled_1_07" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_07.gif" width="338" height="58" alt="" /></td> | ||
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="58" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="58" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="3"> | + | <td colspan="3" bgcolor="#5D5D5D"> |
- | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/plasmidprep.gif" width="338" height="84" rel="lightbox" title="Pureyield Plasmid Preparation"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_08.gif" width="338" height="87" border="0" /></a></td> | + | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/plasmidprep.gif" width="338" height="84" rel="lightbox[pro]" title="Pureyield Plasmid Preparation - A culture of bacterial cells are grown up. The plasmids are then extracted from the cells."><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_08.gif" width="338" height="87" border="0" /></a></td> |
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="87" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="87" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="2"> | + | <td colspan="2" bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Theory1#plasmidprep"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_09.gif" alt="" name="Untitled_1_09" width="171" height="24" border="0" id="Untitled_1_09" /></a></td> |
- | + | <td width="167" rowspan="2" bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/PlasmidPrep"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_10.gif" alt="" name="Untitled_1_10" width="167" height="30" border="0" id="Untitled_1_10" /></a></td> | |
- | + | <td bgcolor="#5D5D5D"> | |
- | <td rowspan="2"> | + | |
- | + | ||
- | <td> | + | |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="24" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="24" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="2" rowspan="2"> | + | <td colspan="2" rowspan="2" bgcolor="#5D5D5D"> |
<img id="Untitled_1_11" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_11.gif" width="171" height="52" alt="" /></td> | <img id="Untitled_1_11" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_11.gif" width="171" height="52" alt="" /></td> | ||
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="6" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="6" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img id="Untitled_1_12" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_12.gif" width="167" height="46" alt="" /></td> | <img id="Untitled_1_12" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_12.gif" width="167" height="46" alt="" /></td> | ||
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="46" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="46" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="3" rowspan="2"> | + | <td colspan="3" rowspan="2" bgcolor="#5D5D5D"> |
- | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/pcr.gif" width="338" height="84" rel="lightbox" title="Polymerase Chain Reaction"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_13.gif" width="338" height="84" border="0" /></td> | + | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/pcr.gif" width="338" height="84" rel="lightbox[pro]" title="Polymerase Chain Reaction - DNA replication is instigated to increase DNA concentration. (Invitrogen Platinum® Pfx)"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_13.gif" width="338" height="84" border="0" /></td> |
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="70" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="70" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td rowspan="12"> | + | <td width="75" rowspan="12" bgcolor="#5D5D5D"> |
- | <img | + | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_14.gif" alt="" name="Untitled_1_14" width="75" height="498" border="0" id="Untitled_1_14" /></td> |
- | <td rowspan="6"> | + | <td width="186" rowspan="6" bgcolor="#5D5D5D"> |
- | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/gel.gif" width="186" height="174" rel="lightbox" title="Gel Electrophoresis"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_15.gif" width="186" height="174" border="0" /></td> | + | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/gel.gif" width="186" height="174" rel="lightbox[pro]" title="Gel Electrophoresis - Distance travelled by the DNA helps identify the DNA molecules present."><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_15.gif" width="186" height="174" border="0" /></td> |
- | <td colspan=" | + | <td colspan="4" rowspan="3" bgcolor="#5D5D5D"> |
- | <img | + | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_16.gif" alt="" name="Untitled_1_16" width="178" height="85" border="0" id="Untitled_1_16" /></td> |
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="14" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="14" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="2"> | + | <td colspan="2" bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Theory1#pcr"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_17.gif" alt="" name="Untitled_1_17" width="171" height="35" border="0" id="Untitled_1_17" /></a></td> |
- | + | <td bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Hfpcr"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_18.gif" alt="" name="Untitled_1_18" width="167" height="35" border="0" id="Untitled_1_18" /></a></td> | |
- | + | <td bgcolor="#5D5D5D"> | |
- | <td> | + | |
- | + | ||
- | <td> | + | |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="35" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="35" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="3" rowspan="2"> | + | <td colspan="3" rowspan="2" bgcolor="#5D5D5D"> |
<img id="Untitled_1_19" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_19.gif" width="338" height="60" alt="" /></td> | <img id="Untitled_1_19" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_19.gif" width="338" height="60" alt="" /></td> | ||
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="36" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="36" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td rowspan="2"> | + | <td width="143" rowspan="2" bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Theory1#gel"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_20.gif" alt="" name="Untitled_1_20" width="143" height="38" border="0" id="Untitled_1_20" /></a></td> |
- | + | <td width="35" rowspan="9" bgcolor="#5D5D5D"> | |
- | <td rowspan="9"> | + | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_21.gif" alt="" name="Untitled_1_21" width="35" height="413" border="0" id="Untitled_1_21" /></td> |
- | <img | + | <td width="28" rowspan="9" bgcolor="#5D5D5D"> </td> |
- | <td> | + | <td width="4" rowspan="9" bgcolor="#5D5D5D"> </td> |
+ | <td bgcolor="#5D5D5D"> | ||
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="24" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="24" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="3" rowspan="3"> | + | <td colspan="3" rowspan="3" bgcolor="#5D5D5D"> |
- | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/digest.gif" width="338" height="84" rel="lightbox" title="Digestion"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_22.gif" width="338" height="150" border="0" /></td> | + | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/digest.gif" width="338" height="84" rel="lightbox[pro]" title="Digestion - DNA strands are cut to either remove a sequence of base pairs or open up a plasmid."><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_22.gif" width="338" height="150" border="0" /></td> |
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="14" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="14" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td> | + | <td bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Gel"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_23.gif" alt="" name="Untitled_1_23" width="143" height="51" border="0" id="Untitled_1_23" /></a></td> |
- | + | <td bgcolor="#5D5D5D"> | |
- | <td> | + | |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="51" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="51" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="2" rowspan="6"> | + | |
- | <img | + | <td colspan="2" rowspan="6" bgcolor="#5D5D5D"> |
- | <td> | + | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_24.gif" alt="" name="Untitled_1_24" width="329" height="324" border="0" id="Untitled_1_24" /></td> |
+ | <td bgcolor="#5D5D5D"> | ||
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="85" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="85" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td> | + | <td bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Theory1#digestion"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_25.gif" alt="" name="Untitled_1_25" width="162" height="40" border="0" id="Untitled_1_25" /></a></td> |
- | + | <td colspan="2" bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/DoubleDigestion"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_26.gif" alt="" name="Untitled_1_26" width="176" height="40" border="0" id="Untitled_1_26" /></a></td> | |
- | <td colspan="2"> | + | <td bgcolor="#5D5D5D"> |
- | + | ||
- | <td> | + | |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="40" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="40" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="3"> | + | <td colspan="3" bgcolor="#5D5D5D"> |
<img id="Untitled_1_27" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_27.gif" width="338" height="54" alt="" /></td> | <img id="Untitled_1_27" src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_27.gif" width="338" height="54" alt="" /></td> | ||
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="54" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="54" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="3"> | + | <td colspan="3" bgcolor="#5D5D5D"> |
- | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/ligate.gif" width="338" height="88" rel="lightbox" title="Ligation"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_28.gif" width="338" height="88" border="0" /></td> | + | <a href="http://www.personal.soton.ac.uk/jeh2v07/images/ProtocolL/ligate.gif" width="338" height="88" rel="lightbox[pro]" title="Ligation - Two samples of DNA are joined together."><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_28.gif" width="338" height="88" border="0" /></td> |
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="88" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="88" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="2"> | + | <td colspan="2" bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Theory1#ligation"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_29.gif" alt="" name="Untitled_1_29" width="171" height="36" border="0" id="Untitled_1_29" /></a></td> |
- | + | <td bgcolor="#5D5D5D"><a href="https://2009.igem.org/Team:Southampton/Project/Protocols/Ligation"><img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_30.gif" alt="" name="Untitled_1_30" width="167" height="36" border="0" id="Untitled_1_30" /></a></td> | |
- | <td> | + | |
- | + | ||
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="36" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="36" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="3"> | + | <td colspan="3" bgcolor="#5D5D5D"> |
- | <img | + | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/Untitled-1_31.gif" alt="" name="Untitled_1_31" width="338" height="21" border="0" id="Untitled_1_31" /></td> |
- | <td> | + | <td bgcolor="#5D5D5D"> |
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="21" alt="" /></td> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/spacer.gif" width="1" height="21" alt="" /></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td bgcolor="#5D5D5D"> </td> |
- | + | <td bgcolor="#5D5D5D"> </td> | |
- | <td | + | <td width="9" bgcolor="#5D5D5D"> </td> |
- | + | <td bgcolor="#5D5D5D"> </td> | |
- | <td | + | |
- | + | ||
- | <td | + | |
- | + | ||
- | <td> | + | <td bgcolor="#5D5D5D"> </td> |
- | + | <td bgcolor="#5D5D5D"> </td> | |
- | <td | + | <td bgcolor="#5D5D5D"> </td> |
- | + | <td bgcolor="#5D5D5D"> </td> | |
- | <td | + | <td bgcolor="#5D5D5D"> </td> |
- | + | <td bgcolor="#5D5D5D"> </td> | |
- | <td | + | <td bgcolor="#5D5D5D"></td> |
- | + | ||
- | <td></td> | + | |
- | + | </tr> | |
- | + | </table> | |
Line 654: | Line 341: | ||
</div> | </div> | ||
<div id="sufooter"> | <div id="sufooter"> | ||
- | + | <h5>| <a href="#">Top</a> | | |
- | + | ||
- | + | ||
| | ||
University of | University of | ||
- | Southampton iGEM 2009 | + | Southampton iGEM 2009</h5> |
</div> | </div> | ||
<div id="contfoot"> | <div id="contfoot"> | ||
<img src="http://www.personal.soton.ac.uk/jeh2v07/images/mainfoot.gif" width="975" height="61" /></div></body> | <img src="http://www.personal.soton.ac.uk/jeh2v07/images/mainfoot.gif" width="975" height="61" /></div></body> | ||
</html> | </html> |
Latest revision as of 19:36, 20 October 2009
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
Protocol Map
As part of the preparation for iGEM 2009, we have peformed a number of experimental processes which are detailed in protocols. We are making these protocols available on our wiki to help future teams in their synthetic approach. These protocols can be accesed together with an explanation of the theoretical basis using the links embedded in the diagram below: