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Team:Imperial College London/Temporal Control/Graph
... href="https://2009.igem.org/Team:Imperial_College_London/Temporal_Control/Graph"><img style="vertical-align:bottom;" width="15%" src="http://i691.photobuck ...m:Imperial_College_London/Temporal_Control/Graph">Testing construct and graph</a></center></td>

7 KB (1,074 words) - 20:30, 19 October 2009

Page text matches

Team:TUDelft/Ethics results
[[image:Graph i.jpg|thumb|280px|Graph i.]] [[image:Graph ii.jpg|thumb|280px|Graph ii.]] 

52 KB (8,420 words) - 22:51, 21 October 2009
Team:Groningen/Promoters
|{{graph|Team:Groningen/Graphs/Promoters/OD600/LB/Background}} |{{graph|Team:Groningen/Graphs/Promoters/OD600/TY/Background}}

4 KB (601 words) - 11:25, 30 September 2009
Team:Aberdeen Scotland/parameters/invest 4
The graph shows the concentration of molecules against the iteration number (which is [[Image:Input Model Graph 1.jpg|center|500px]]

11 KB (1,786 words) - 17:18, 18 August 2009
Team:Calgary/Modelling/Blog
...ering about results, well our model is also able to produce nice and clean graph visualizations. Lets take a look at sample AI2 concentration over 1000 step ...12625874613266" border="0" /></a></div><div>I am gong to present only this graph for our result section just to demonstrate that our model is able to not on

27 KB (4,453 words) - 06:56, 18 September 2009
Team:Groningen/Modelling/Characterization
...rsenic. If there is no efflux of arsenic the dervative of the accumulation graph is the speed at wich arsenic is pumped inside the cell. The maximum speed w ...or at a concentration of 100 micromolair. On the left side one can see the graph of the luminance and on right side and on the right side one can see the co

29 KB (4,242 words) - 00:13, 22 October 2009
Team:Berkeley Software/Kepler
...scusses the way in which we can go from a composite device, to an assembly graph (an object representing its efficient assembly), and finally to commands fo ...d into the Kepler's workflow as Assembly Info. Our example assembly graph can be represented visually as: 

18 KB (2,814 words) - 07:18, 26 April 2010
Team:Calgary/Modelling/MC/Results
... are generated over time by divisions (red, green, and yellow lines). This graph demonstrates that number of AI-2 molecules changes logarithmically between ... the production of GFPs. After this point, the degradations of GFPs occur. Graph 3 demonstrates the number of GFP proteins in one of the newborn cells in th

7 KB (1,111 words) - 03:14, 22 October 2009
Team:Calgary/10 July 2009
Mathematica graph function (a built-in function) gets a list of numbers and plot them in a wa ..., we pass the number of AI-2s in teach time step as a list to our built-in graph function and we generate it. However, when division occurs we have to pass

14 KB (2,249 words) - 21:57, 20 October 2009
Team:Groningen/Project/Promoters
...lower production and degradation of ArsR (the two left graphs). Also, each graph has a line showing the formation of a product behind the ars promoter that * In the bottom-right graph the induction is done gradually (the amount of arsenic increases linearly d

29 KB (4,430 words) - 23:38, 21 October 2009
Team:EPF-Lausanne/LOVTAP Results
... of the fluorescence every 3 minutes: this was the data used to obtain the graph you can see further below. This graph shows the average curve for each condition (tryptophane added, ATC added, o

22 KB (3,540 words) - 20:47, 21 October 2009
Team:Imperial College London/Drylab/Enzyme/Simulations
Simulation 1: The Generic Graph ...mplex over time are shown. Comparisons between the standard enzyme kinetic graph with and without Michaelis-Menten kinetics are made.

6 KB (985 words) - 01:36, 22 October 2009
Team:Tokyo Tech/cph
'''Graph 1　: lacZ assay result of the constructed parts''' Shown in this graph 1, the BioBrick parts we’ve made, in the 4 columns in the right, worked e

8 KB (1,312 words) - 14:35, 21 October 2009
Team:Groningen/Brainstorm/Modelling
...e two views of the data are linked (although at this time both the kind of graph and the link is not optimal) and that it would be possible to create templa {{graph|Team:Groningen/Graphs/Test}}

10 KB (1,538 words) - 17:06, 14 February 2010
Team:Groningen/Project/Transport
...e average optical density (OD600) of a construct over time. The graph on the left shows that increased As(III) levels inhibits growth and as the The second graph represents the OD600 values of a ''E. coli'' culture with pLac-G

17 KB (2,607 words) - 23:16, 21 October 2009
Team:Aberdeen Scotland/parameters/invest 3
...wer expected limit and the upper expected limit and plot a point in our 3D graph corresponding to the randomly chosen values. This point is then colored to [[Image:Monte Carlo Graph 1.jpg|center|700px]]

4 KB (697 words) - 21:05, 21 October 2009
Team:Aberdeen Scotland/internal/SimBiology
... exactly, and if you want to see the set of parameters we used. Below is a graph of the system turning on in response to input signals of quorum sensing and ... of LacI. These had a sensitivity of many thousand as can be seen from the graph below. The reason for LacI being singled out as a sensitive species and tha

7 KB (1,191 words) - 09:43, 18 August 2009
Team:Todai-Tokyo/Modeling
...ology toolbox in MATLAB for the simulation, and the result is shown as the graph below. ...t the actual system should exhibit the oscillation pattern similar to the graph above with some possible noise and unstable behavior.

10 KB (1,580 words) - 02:26, 22 October 2009
Allen Cai's notebook
... are 100% similar, and if the p-value of the graph is 0.00, that means the graph is 0% similar (100% different). When comparing our WT strain and strain tha

26 KB (4,506 words) - 04:15, 13 October 2009
Team:Calgary/17 August 2009
...e k parameter doesn't affect the behaviour of the graph . The shape of the graph stays the same . ... constants on the graph. This resulted in no change in the behavior of the graph as predicted by the paper. The max/min/ steepness of the graphs changed as

15 KB (2,422 words) - 03:41, 22 October 2009
Team:Aberdeen Scotland/quorum/invest 1
The graph shows the concentration of molecules against the iteration number (which is [[Image:Input Model Graph 1.jpg|center|300px]]

8 KB (1,354 words) - 11:44, 14 August 2009
Team:Virginia/Model
...acellular arsenate decays as it diffuses into the cell. In the upper right graph, intracellular arsenate initially peaks as the arsenate diffuses into the c ...cell. As we can see in the lower left extracellular arsenite concentration graph, as the cellular system functions, extracellular arsenite levels rises as e

6 KB (909 words) - 03:22, 22 October 2009
Team:Cambridge/Project/CA03
...-carotene of known amount as the standard reference and included it in the graph below. ... 100μL water and loaded on to MicroPlate Reader for a full spectrum. Each graph shows the average of two readings. Value normalised with blank (50% acetone

9 KB (1,283 words) - 23:16, 21 October 2009
Team:Valencia/Parts/Characterization
...plex and photons –light- are emitted during a short period of time. This graph shows yeasts’ response to the addition of 30 µL of KOH: ...ons, and KCl, which do not perform alkali shock) are also included in this graph:

9 KB (1,413 words) - 01:29, 22 October 2009
Team:IIT Bombay India/PSM
[[Image:Graph-1.jpg]] [[Image:Graph-2.jpg]]

4 KB (651 words) - 01:02, 22 October 2009
Team:EPF-Lausanne/Analysis
Using EXCEL, we obtain the following graph, which represents the evolution of the temperature in function of time: Using EXCEL, we obtain the following graph, which represents the evolution of the density in function of time:

38 KB (5,625 words) - 09:21, 21 September 2009
Team:Groningen/Project/Vesicle
|[[Image:Groningen_ODFerAndNonFer.PNG|400px|thumb|Figure 5. Graph of OD measurements at 600nm of both the fermentor and non-fermentor tests. {{graph|Team:Groningen/Graphs/DensityLimit|id=densityLimitGraph}}

22 KB (3,354 words) - 23:48, 21 October 2009
Team:Groningen/Notebook/20 July 2009
...g. 1B) in [[Team:Groningen/Literature#Meng2004|Meng2004]] by importing the graph in Inkscape and aligning the axes with its rulers.

4 KB (609 words) - 09:33, 19 August 2009
Team:Cambridge/Notebook/Week5
...M. Very low level transcription can be seen to be amplified. The amplified graph (91) starts to drop off at high concentrations: this may be due to toxicity ...hat for zero, showing the basal amplification. What is interesting in this graph is that the gain drops off, well before the reduction of expression for cel

17 KB (2,722 words) - 08:32, 3 September 2009
Minnesota/30 June 2009
Here is the "leaky" graph along with the base for comparison: As can be seen the "leaky" graph indeed does show increased GFP production at low aTc concentrations. 

1 KB (188 words) - 16:21, 25 August 2009
Team:McGill/Modeling
...nd then getting closer to the inhibitory site along the opposite side. The graph of frequency of the inhibitory molecule at the inhibitory site vs separatio ...iodic motion. Before we look into these curves, let's look over the entire graph. When the two oscillators are very close together, their frequency is alway

19 KB (2,820 words) - 01:54, 22 October 2009
Team:EPF-Lausanne/Analysis methods
...cs → Labels. By chosing Bonds we select the distance labeled. The graph tab will create a plot of the distance between these two atoms over time. ..."label", select dihedral, click on the created dihedral, click on the tab "Graph" and finally save the calculated data.

36 KB (5,624 words) - 19:21, 21 October 2009
Team:Sheffield/Modeling
From the graph above it is clear that at high intensity OmpRP concentration is less, there [[Image:graph.png|center|750px|border]]

4 KB (674 words) - 16:21, 18 October 2009
Team:Calgary/9 October 2009
...d degradation of GFP proteins in parent cells and newborn cells. The First graph graph shows the number of GFP proteins within one of the parent cells (indicated

8 KB (1,191 words) - 23:32, 21 October 2009
Team:Edinburgh/biology(results)
...moter activity from BBa_I20260 is represented by "positive control" on the graph. Procaine acts as an agonist to phosphorylated omp-R, the inherent activato ...nstrated that 10 mM is the sensitivity peak of this promoter (look at last graph).

16 KB (2,190 words) - 23:01, 21 October 2009
Team:Stanford/ModelingPage
... RA is mainly based on a chain of two catalyzed reactions, as shown in the graph below: [[Image:RA graph.jpg|800px|center]]

6 KB (949 words) - 03:52, 22 October 2009
Team:DTU Denmark/theory private securkey=hjg1mab2ak47
... controlled bursts in product of reporter gene expression (C: lower graph). 

13 KB (2,106 words) - 15:02, 17 October 2009
Team:DTU Denmark/applications private securkey Dhjg1mab2ak47
... controlled bursts in product of reporter gene expression (C: lower graph). 

11 KB (1,718 words) - 10:27, 20 October 2009
Team:Berkeley Software/KeplerTutorial
...emblyGraph & GetString: both receive data from Clotho, such as an assembly graph or some debugging information. These actors output either genetic Object da G. OneStageProcessing: Creates the files from an assembly graph, the choice of stage, and antibiotic selection. 

9 KB (1,374 words) - 00:32, 22 October 2009
Team:DTU Denmark/testtesttest242
... controlled bursts in product of reporter gene expression (C: lower graph). 

18 KB (2,809 words) - 22:11, 18 October 2009
Team:EPF-Lausanne/Results/EDS
We get a quite constant value. It would be more interesting to compare this graph to the [https://2009.igem.org/wiki/index.php?title=Team:EPF-Lausanne/Result ...he position of ASN414, that's why we wanted to check it with the following graph, which plot the dihedral angles of Asn 414 against the dihedral angles of G

11 KB (1,794 words) - 21:40, 21 October 2009
Team:EPF-Lausanne/Results/Validation
Using EXCEL, we obtain the following graph, which represents the evolution of the temperature in function of time: Using EXCEL, we obtain the following graph, which represents the evolution of the density in function of time:

5 KB (771 words) - 16:03, 19 October 2009
Team:UCL London/From the lab/Results
...://partsregistry.org/Part:BBa_K239009 BBa_K239009]). ''Please click on the graph to view larger image.'' ...org/Part:BBa_K239001 BBa_K239001]. According to Fig.3a and Fig.3c degP+GFP graph, degP promoter showed weak fluorescence when it reached stationary phase.No

5 KB (726 words) - 00:43, 22 October 2009
Team:NYMU-Taipei/Project/Removal
====Graph of Experiments====

16 KB (2,250 words) - 02:53, 22 October 2009
Team:DTU Denmark/applications
... leading to controlled bursts of reporter gene expression (C: lower graph). 

11 KB (1,640 words) - 03:24, 22 October 2009
Team:University of Alberta/14 September 2009
Take out bar graph on essential genes list ...one testing them. Replace with bullet slide of what we had to optimize – graph it?

6 KB (925 words) - 01:45, 22 October 2009
Team:Cambridge/Project/Amplification/Characterisation
=== Sample Graph ===

6 KB (778 words) - 03:08, 22 October 2009
Team:Aberdeen Scotland/modeling/combined model
...orum sensing activate for a lower density of bacteria than in reality. The graph below shows the number of alive bacteria at the site of the breach: As you can see in the above graph the number of bacteria increases initially as bacteria arrive from the surr

4 KB (583 words) - 23:10, 21 October 2009
Team:Illinois-Tools/Project
...also access organism, enzyme, and gene information. A visualization of our graph can be seen below. ...lgorithm we used is the bidirectional dikstra. We took this algorithm from graph theory to handle our large data set. The weights are assigned based on the

17 KB (2,699 words) - 16:12, 15 June 2010
Team:Berkeley Software/BingNotebook/Notes
...problem. I've found a java graph library, JGraphT, that I'll be using as a graph framework. I also found the java Preferences library, which I think we shou

12 KB (2,048 words) - 05:57, 20 October 2009
Team:Wash U/Biological Parts
[[Image:02 puc pro characterization graph a.png|700px|]] ...ity and the associated absorbance with that point. The center stacked bar graph shows the accumulation of optical density given by the absorbance readings

23 KB (3,627 words) - 03:59, 22 October 2009
Team:Groningen/Project/Accumulation
{{graph|Team:Groningen/Graphs/AccumulationFactor|id=accumulationFactorGraph}} // Draw graph

35 KB (5,337 words) - 22:10, 21 October 2009
Minnesota/7 July 2009
...basal''' came back and were analyzed, here is the base model and the basal graph: As expected, regardless of aTc concentration the graph looks like the GFP expression at high aTc concentrations of the base model.

746 B (120 words) - 16:39, 30 July 2009
Team:Calgary/10 June 2009
...ems such as limits , integrations , matricies etc . Can also plot data and graph equations . Integrated DNA technologies has generously offered to donate graph papers and sharpies. IDT is iGEM's community partner.

7 KB (986 words) - 02:15, 20 October 2009
Team:Calgary/13 August 2009
... it is able to produce a visual representation of our model. The following graph represents the system without AI-2, and when there are 20 Pqrr4 promoters i The next graph represents the system without AI-2, and when there is only 1 Pqrr4 promoter

17 KB (2,753 words) - 03:38, 22 October 2009
Team:Cambridge/Project/Violacein
...sed for carotene. The results were normalised for OD and then plotted as a graph of absorption units against wavelength: [[Image:Vio wavelength graph.JPG]]

5 KB (763 words) - 12:45, 21 October 2009
Team:Newcastle/Modeling/Population
[[Image:Newcastle Population Example Graph.png|thumb|This is an example graph created using some of the output from a small run of the population model,

8 KB (1,197 words) - 02:51, 22 October 2009
Team:IIT Bombay India/Project
[[Image:Graph-1.jpg]] [[Image:Graph-2.jpg]]

12 KB (1,765 words) - 03:53, 22 October 2009
IllinoisTools/1 August 2009
...ls. I was very successful with my program, as it makes a nice, easy to see graph of any reaction pathway. I sent this code to Donny, so that he may work it

2 KB (361 words) - 18:36, 21 October 2009
Team:Aberdeen Scotland/Project
...erdeen_Scotland/internal/stochastic">stochastically</a></html>, an example graph is shown here: ...arameters/invest_3">Monte Carlo</a></html> simulations as in the following graph:

13 KB (2,046 words) - 17:15, 14 October 2009
Team:Aberdeen Scotland/internal/deterministic
[[Image:Det graph 1.jpg|center|700px]] [[Image:Det graph 2.jpg|center|700px]]

11 KB (1,717 words) - 21:22, 21 October 2009
Team:Aberdeen Scotland/parameters/invest 5
..., the increase in the production of GFP becomes even more pronounced. This graph shows that changing the system to mimick V.fischeri, gives us the behaviour

6 KB (926 words) - 17:41, 14 October 2009
Team:Valencia/WetLab/YeastTeam/Results/graphs
...lts of the other. According this, when we only compare results in the same graph if they were obtained with the same luminometer. However, an increase (or n This graph clearly show us that using a same voltage, we obtain a better response with

4 KB (696 words) - 18:14, 21 October 2009
Team:Groningen/Modelling/model
{{graph|Team:Groningen/Graphs/model|id= modelDataGraph}} {{graph|Team:Groningen/Graphs/Totalmodel|id=TotalmodelGraph}}

2 KB (187 words) - 11:26, 16 September 2009
Team:Heidelberg/Notebook measure/NotebookMi
[[image:HD09_microscopy_exposuretime.PNG|center|350px|thumb|'''Figure 2: Graph of exposure time versus average grey values''' The correlation factor is in [[Image:HD09 microscopy HeLastand.PNG|center|350px|thumb|'''Figure 5: Graph of exposure time versus average grey values''' Mean grey values were obtain

9 KB (1,268 words) - 00:24, 22 October 2009
EPF-Lausanne/11 September 2009
All the clones react in the same way, here it is the graph for RO2#4. It seems we have an increase until somewhere between 2ul and 4 u Nicolas ce graph n'est pas dans ce que tu nous a envoyé, est-ce que tu peux le rajouter stp

2 KB (377 words) - 12:48, 4 October 2009
Team:Calgary/28 September 2009
The graph changes rapidly in the first few seconds to give equilibrium values . ...re very similar . Only the level of expression and the rate with which the graph reaches equilibrium changes (but only minutely ).

6 KB (832 words) - 00:04, 22 October 2009
Team:Imperial College London/Wetlab/Protocols/SecondaryCarbon
...ake half hour readings from 5th hour to more accurately determine shape of graph. 

5 KB (782 words) - 11:03, 2 October 2009
Team:Imperial College London/Wetlab/Protocols/Abs
...lture. This data set is then combined with absorbance readings to create a graph relating the number of colony forming cells per ml to their absorbance meas The absorbance is related to the number of colony forming units in a graph. 

5 KB (816 words) - 11:02, 2 October 2009
Team:Imperial College London/Temporal Control
... href="https://2009.igem.org/Team:Imperial_College_London/Temporal_Control/Graph#Explanation_of_Timeline [[Team:Imperial_College_London/Temporal_Control/Graph#Testing_Construct | Click here]] to see our testing construct.

14 KB (2,079 words) - 01:00, 21 October 2009
Team:Imperial College London/Wetlab/Protocols/Trehalose
...plot a graph of trehalose concentration against time. The gradient of this graph would give us the total activity of cells. Dividing this by the number of c

11 KB (1,700 words) - 10:45, 30 September 2009
Team:Edinburgh/modelling(reallifemodelling)
The TNT diffusion graph after a year is shown below ... a very low conversion of TNT to Nitrites will be achieved. The diffusion graph for Nitrite is very similar to that for TNT.

27 KB (3,692 words) - 23:05, 21 October 2009
Team:Calgary/Modelling/Results
The following is the graph produced by our differential equation based model under five different leve The following is the graph produced by our differential equation based model under five different leve

4 KB (648 words) - 03:21, 22 October 2009
Ryan Liang's notebook
...Flowjo program; organized the data on excel, then put the results on a bar graph. ...analyze these numbers on a computer program Flowjo, excel, as well as on a graph.

9 KB (1,308 words) - 01:16, 13 October 2009
Team:Wisconsin-Madison/SDMT
This graph shows the growth of DH10B control cells in .6 M NaCl/LB. Cells were treate This graph shows the growth of DH10B cells harboring the GsSDMT gene on an expression

1 KB (213 words) - 16:46, 20 October 2009
Team:EPF-Lausanne/Results/Differential Analysis
... high positive value. We can see that the CYS450 has an high value on this graph, which tends to prove that it has a signification.

5 KB (840 words) - 10:05, 21 October 2009
Wisconsin-Madison/28 June 2009
[[Image:0628 graph 1.jpg]] [[Image:0628 graph 2.jpg]]

4 KB (424 words) - 06:11, 20 October 2009
Team:BCCS-Bristol/BSim/Case studies/Magnetotaxis
...g the magnetic field strength on the average velocity of the bacteria. The graph (Figure 1) below shows the result of this. As can be seen, there is a maxim [[Image:BCCS-Bristol_VaryingFieldOnVelocity.jpg|center|frame|Figure 1: Graph of the effect of varying the magnetic field strength on the average velocit

3 KB (491 words) - 01:51, 22 October 2009
Team:BCCS-Bristol/BSim/Case studies/Repressilators
...ynchronisation transition for random initial conditions and the right hand graph shows synchronisation for uniform initial conditions. As expected, synchron

15 KB (2,195 words) - 01:15, 22 October 2009
Team:BCCS-Bristol/Project/Wet lab/Notebook
[[Image:BCCS_cell_conc.jpg|center|500px|frame|The graph shows on the y-axis Optical Density at absorbance of 600nm (representative [[Image:BCCS_Growth_curves.jpg|center|200px|frame|The graph illustrates the assessment of growth post promoter induction with L-Arabino

24 KB (3,559 words) - 14:44, 21 October 2009
Team:Calgary/Lab/Mutant
...he left hand bars depict the KT1144 cells with and without LuxO D47E. This graph shows that without the LuxO D47E mutant in the KT1144 cells, fluorescence r

8 KB (1,199 words) - 01:10, 22 October 2009
Team:Cambridge/Project/VI03
...sed for carotene. The results were normalised for OD and then plotted as a graph of absorption units against wavelength: [[Image:Vio wavelength graph.JPG]]

2 KB (329 words) - 01:20, 22 October 2009
Team:BCCS-Bristol/BSim/Case studies/VESECURE
The graph below shows the proportion of activated bacteria in the population as a fun The graph below shows the proportion of activated bacteria in the population as a fun

6 KB (942 words) - 03:19, 22 October 2009
Team:USTC Software/When
:Is it better to export a graph following SBGN standard?

9 KB (1,431 words) - 17:26, 21 October 2009
Team:Berkeley Software/DougNotebook
... final assembly independent of the cost metrics used to build the assembly graph (which could be corrupt when we break cycles to perform valid 2ab coloring)

22 KB (3,756 words) - 06:42, 5 October 2009
Team:Illinois-Tools/Notebook/Week2
...he modules to install and work properly. I was finally able to generate a graph via Python in conjunction with Graphviz!! I also experimented more with Cy

3 KB (496 words) - 07:10, 4 August 2009
Team:Wash U/Project
... the tissue flasks as measured by OD assessed as absorbance at 600 nm. The graph is organized such that those closest to the "days" axis were closest to the

26 KB (3,892 words) - 00:48, 10 November 2009
IllinoisTools/6 June 2009
...he modules to install and work properly. I was finally able to generate a graph via Python in conjunction with Graphviz!! I also experimented more with Cy

3 KB (477 words) - 14:57, 9 September 2009
Team:Bologna/Software
...xplot of bacteria fluorescence (Figure 7) and the area vs the fluorescence graph (Figure 8).

11 KB (1,698 words) - 23:00, 21 October 2009
Team:Groningen/Graphs/Test2
caption: 'This is another graph of some extremely interesting data.',

177 B (27 words) - 13:59, 30 July 2009
Team:Tsinghua/Modeling
... to conduct the molecular docking day experiment. In the generated docking graph, the ligand (we used the crystalized fiber protein to substitute the target

17 KB (2,573 words) - 23:49, 21 October 2009
Team:Groningen/Notebook/4 August 2009
The ‘dojo’ graph doesn’t work in Mozzila firefoxs. This problem is fixed trough set both t

6 KB (814 words) - 15:18, 4 August 2009
Team:Aberdeen Scotland/quorum
The graph shows the concentration of molecules against the iteration number (which is

4 KB (664 words) - 13:38, 14 August 2009
Team:Minnesota/Parts Characterization
...y inducible with a general downward trend in GFP production over time. The graph of aTc concentration of 50 ng/ml again demonstrates the spike in GFP produc

17 KB (2,746 words) - 18:51, 20 October 2009
Minnesota/3 July 2009
...creasing these kinetic constants does not have a significant affect on the graph. 

3 KB (447 words) - 16:31, 30 July 2009
Team:Cambridge/Notebook/Week6
...ration, with different set repressor levels as different lines on the same graph. This is equivalent to the competitive inhibtion of enzyme action, a sample

15 KB (2,372 words) - 09:42, 24 September 2009
Team:Cambridge/Notebook/Week7
...he different strains and their effects were discussed, such as using a bar graph with coloured pictures of the cells in the boxes - an effective way to show

7 KB (1,159 words) - 16:27, 7 October 2009
Team:UCL London/Project/Vision
[[Image:G.png|700px|Graph|]]

3 KB (485 words) - 02:20, 22 October 2009
Minnesota/24 July 2009
...el, I decided to make sure cutting it out entirely came out with a logical graph. So reaction 11 and 13 kinetic constants were set to zero. 

2 KB (329 words) - 20:33, 30 July 2009
Minnesota/16 June 2009
...d at how decreasing the same constant by an order of magnitude changed the graph. Below are these two models along with the base model for comparison:

2 KB (274 words) - 20:17, 29 July 2009
Minnesota/24 June 2009
As you can see from the above graph, this model shows no response to aTc concentration. The gfp output is the s

3 KB (513 words) - 21:52, 30 July 2009
Minnesota/29 June 2009
...changes that were made from the base model inorder to produce the modeling graph shown above. This model was completed by the supercomputer the day after th

2 KB (274 words) - 16:19, 25 August 2009
Minnesota/2 July 2009
... change to see if changing the model may have affected how they effect the graph. I submitted eight models today as described below: 

3 KB (429 words) - 16:48, 25 August 2009
Minnesota/9 July 2009
...o in order to check whether a decrease would ever significantly affect the graph: 

1 KB (222 words) - 19:10, 30 July 2009
Minnesota/22 July 2009
... accuracy of the model and allow for more manipulation of the shape of the graph. It is called '''smad_ttn_test3'''. 

654 B (103 words) - 20:03, 30 July 2009
Team:Calgary/26 June 2009
Graph section of our model is completed this week. As it was mentioned, now we ha

13 KB (2,034 words) - 06:48, 20 October 2009
Team:USTC Software/Perspective
'''Q1:''' Is it better to export a graph following SBGN standard?

5 KB (826 words) - 17:52, 19 October 2009
Team:Calgary/21 August 2009
...ndicate the importance of filtering the supernatant (data not shown). The graph indicates an average obtained from 3 trials.

12 KB (1,805 words) - 21:12, 1 October 2009
Team:Groningen/Notebook/11 August 2009
I look at figure 2 from Dey1995 but we don’t used is because the graph is in time and there are no exact data about the concentration of cells.

4 KB (687 words) - 09:41, 12 August 2009
Team:Illinois-Tools/Notebook/Week7
I created a graph library which I call dongraphlib to handle our specific functions. I took a

1 KB (202 words) - 16:10, 4 August 2009
IllinoisTools/27 June 2009
...ted other libraries that python can work with to see how else I can make a graph using python. I learned some new things, but I am not sure if they will be

2 KB (347 words) - 15:43, 21 October 2009
IllinoisTools/11 July 2009
I created a graph library which I call dongraphlib to handle our specific functions. I took a

3 KB (585 words) - 20:46, 1 September 2009
IllinoisTools/18 July 2009
I modified the graph library to add room for additional weights. I also added search fields rath

2 KB (297 words) - 18:37, 21 October 2009
Team:Groningen/Notebook/10 August 2009
* {{done}}(?) Infobox z-order not correct in IE (next to a graph as on the transport page at least).

5 KB (887 words) - 08:54, 12 August 2009
Team:Aberdeen Scotland/WetLab/quorumsensing/results
...fluorescence was then assessed in the three transformant types. The graph below (Figure 2) shows the negative control (pTrc99A / pIR double transform

9 KB (1,509 words) - 21:51, 14 October 2009
Team:Imperial College London/Major results
From the graph on the right, we can see that the corrected fluorescence of glucose is almo

9 KB (1,368 words) - 03:14, 22 October 2009
Team:Valencia/WetLab/YeastTeam/Experimental
... results of the other. According this, we only compare results in the same graph if they were obtained with the same luminometer. However, an increase (or n

14 KB (2,204 words) - 23:31, 21 October 2009
EPF-Lausanne/4 September 2009
 The 2 "wrong" clones had the following graph:

3 KB (546 words) - 07:16, 21 September 2009
EPF-Lausanne/9 September 2009
This clone seems to work as well if we compare this graph to the one with TRP. We have the same results as for RO1#1.

9 KB (1,414 words) - 22:35, 21 October 2009
Team:Calgary/24 September 2009
...onse . This was corrected . (only after seeing weird oscillations from the graph : probably due to the nature of the solver ) It was decided that some more

5 KB (801 words) - 20:44, 8 October 2009
Team:TUDelft/Modeling Conjugation
...e Poisson distribution of separation values for various intensities in the graph below.

8 KB (1,183 words) - 17:31, 20 October 2009
Team:Imperial College London/Wetlab/Protocols/IPTGgrowth
...lture. This data set is then combined with absorbance readings to create a graph relating the number of colony forming cells per ml to their absorbance meas

4 KB (663 words) - 11:04, 2 October 2009
Team:Yeshiva NYC/Project
...fusion in one dimension. It was her job to come up with the plan of how to graph diffusion as a plot of intensity versus position from just a picture of a d

10 KB (1,684 words) - 19:57, 18 October 2009
Team:Groningen/Modelling/Interactive
{{graph|Team:Groningen/Graphs/Test}} |<html> <INPUT type="submit" value="Show Graph"> </html>

7 KB (806 words) - 11:30, 30 September 2009
Team:Imperial College London/Drylab/Genome Deletion/Simulations
*There is a "bump" in the graph of cell population. This can be explained:

3 KB (550 words) - 14:43, 22 September 2009
Imperial College London/Notebook/23 September 2009
... cell growth. This can be seen by the similarity of data on the normalised graph (bottom right, figure 1).

2 KB (287 words) - 12:04, 12 October 2009
Team:Sheffield/Project
'''Graph analysis'''

8 KB (1,204 words) - 15:04, 19 October 2009
Team:KULeuven/Modeling/Integrated Model
...e proportional gain. Oscillations will become larger as can be seen on the graph below. Eventually the oscillations become dominant and will destabilize the

3 KB (408 words) - 17:34, 11 October 2009
Team:BCCS-Bristol/BSim/Features/Magnetotaxis
... group of bacteria make with the magnetic field direction. As shown in the graph below [[#ref3|[3] ]]:

2 KB (353 words) - 00:23, 21 October 2009
Imperial College London/Notebook/1 October 2009
...ies with OD, repetition of the experiment will allow to fit a curve to the graph: cell number vs OD.

645 B (92 words) - 15:29, 1 October 2009
Team:Imperial College London/CheckList
...bout what you have done for each model in very laymans terms? Ie this is a graph showing a simulated model for blah blah blah.

12 KB (2,039 words) - 14:40, 2 October 2009
Team:Calgary/5 October 2009
...tem doesn't seem to have a saturation point for AI2 . The GFP level in the graph always decreases faster with more AI2 is added to the system .

7 KB (1,077 words) - 23:34, 21 October 2009
Imperial College London/Notebook/18 September 2009
[[Image:graph.jpg]] 

761 B (102 words) - 21:09, 4 October 2009
EPF-Lausanne/11 October 2009
...to check the reproductibility of our past results. We obtain the following graph: coming soon...

4 KB (605 words) - 20:58, 12 October 2009
EPF-Lausanne/15 October 2009
The resulting graph is:

2 KB (321 words) - 15:15, 19 October 2009
EPF-Lausanne/16 October 2009
...ted (cells in M9 only and +ATc). If this was the case, we would obtain the graph below of the relative difference which would be more logical.

4 KB (583 words) - 09:48, 18 October 2009
Team:TUDelft/Conjugation Results
We can see from this graph that expression of trbK does indeed reduce the conjugation efficiency by fo

7 KB (944 words) - 23:03, 21 October 2009
Team:Imperial College London/Temporal Control/Thermoinduction/System
...led gene E expression in Escherichia coli |FEMS Microbiol Lett|347-352}} - Graph and Lysis E

2 KB (362 words) - 23:32, 19 October 2009
Team:Imperial College London/Drylab/Autoinduction/Model2
When lactose is the only carbon source, the graph has a sigmoid shape: For different extracellular lactose concentrations, it

2 KB (300 words) - 17:31, 17 October 2009
Team:Harvard/Laser
...ast or inhibited their growth. The results of those experiments are in the graph below:

16 KB (2,533 words) - 03:53, 22 October 2009
Team:Aberdeen Scotland/parameters/invest 6
In the above graph the bacteria number is plotted on the x axis, time on the y, and colour rep

5 KB (878 words) - 16:29, 21 October 2009
IllinoisTools/29 August 2009
I worked on improving the graph library to avoid error messages by simply returning false if it is unable t

770 B (129 words) - 23:29, 21 October 2009
Team:Stanford/ProjectPage
[[Image:Graph of Immune disease incidence.png|thumb|right|'''Fig 2.1''' Incidence of vari

26 KB (3,950 words) - 04:00, 22 October 2009
August/10 October 2009
...tion 455nm, emission 507nm). This was repeated once every hour to obtain a graph of fluorescence versus OD600. From our tests it appeared that the only part

3 KB (511 words) - 01:56, 21 October 2009
Lesson Plan
...the modifications they executed and what the response was. They can make a graph and a slide-show depending on the availability of the computers and compete

4 KB (655 words) - 19:18, 12 October 2009
Team:TUDelft/ConjugationProtocol
# Test the OD600. You can use the following graph to estimate the time needed for E.coli containing R751 to reach an OD600 va

5 KB (727 words) - 11:39, 17 October 2009
Team:Berkeley Wetlab/Passenger: Ag4 Peptide
...beta). To get rid of the scattering signal, cells were spun down, and this graph was generated using the respective supernatants. The formation of silver pa

4 KB (566 words) - 02:42, 22 October 2009
Team:KULeuven/Project Results
Next, the effect of blue light on this promoter was examined. As shown on the graph below, blue light irradiation has a significant effect on the strength of t

6 KB (986 words) - 20:10, 21 October 2009
Week One
File:DOC160509-16052009101732_Page_07.jpg|Neha's Graph

4 KB (601 words) - 18:07, 15 October 2009
Team:IIT Madras/Results
...0">Fig 8.2: All 4 strains in media without antibiotics. This graph clearly elucidates the fact that the cells which bear a plasmid tend to gro

4 KB (587 words) - 01:50, 22 October 2009
Team:ArtScienceBangalore/Notebook/Week one
File:DOC160509-16052009101732_Page_07.jpg|Neha's Graph

4 KB (600 words) - 16:39, 14 October 2009
Team:ArtScienceBangalore/Notebook/Week One
Image:DOC160509-16052009101732_Page_07.jpg|Neha's Graph

5 KB (796 words) - 21:23, 21 October 2009
Team:Imperial College London/Temporal Control/Graph
... href="https://2009.igem.org/Team:Imperial_College_London/Temporal_Control/Graph"><img style="vertical-align:bottom;" width="15%" src="http://i691.photobuck ...m:Imperial_College_London/Temporal_Control/Graph">Testing construct and graph</a></center></td>

7 KB (1,074 words) - 20:30, 19 October 2009
Team:Valencia/WetLab/YeastTeam/Results
This graph shows the behaviour of a set of designs after the supply of a 4V shock.

6 KB (895 words) - 03:13, 22 October 2009
Team:Berkeley Wetlab/Passenger: MGFP
Graph of the mean OD562 signals normalized to OD600 data:

6 KB (934 words) - 21:43, 21 October 2009
Trp.m
% Graph

1 KB (156 words) - 06:19, 21 October 2009
Wisconsin-Madison/16 June 2009
[[Image:graph.jpg]]

2 KB (243 words) - 23:46, 18 October 2009
Team:Stanford/NotebookPage/18 August 2009
****Graph Larger

2 KB (351 words) - 20:29, 20 October 2009
Wisconsin-Madison/26 June 2009
[[Image:0626 graph.jpg]]

6 KB (780 words) - 19:48, 20 October 2009
Team:USTC Software/hoWIO
3. Get reactions related information from"dbt.dat". As the graph, put them into the model by categories

9 KB (1,417 words) - 03:17, 22 October 2009
Team:Tokyo Tech/BlackenedEcoli
the temperature will change as the graph shows.

7 KB (1,091 words) - 06:31, 9 November 2009
Team:UNICAMP-Brazil/Coliguard/Results
[[Image:Graph 1. Growth cellular after ITPG induction1.JPG|500px|center]]

4 KB (664 words) - 03:56, 22 October 2009
Team:Imperial College London/Wetlab/Results/Cheminduction
...hat the growth rate corresponds to the gradient of the linear phase in the graph. This was done for two parallel wells, hence why we have plotted two parall

2 KB (367 words) - 21:03, 20 October 2009
Team:Calgary/Lab/Reporter
 This graph is divided into two lines of cells and a positive control. The left hand ba

6 KB (869 words) - 03:37, 22 October 2009
Team:Aberdeen Scotland/combined
... exactly, and if you want to see the set of parameters we used. Below is a graph of the system turning on in response to input signals of quorum sensing and

2 KB (325 words) - 12:22, 21 October 2009
Team:NTU-Singapore/Project/Wetlab
From the graph, the cell lysate containing CHE had achieved higher fluorescence readings t

9 KB (1,223 words) - 03:44, 22 October 2009
Team:NYMU-Taipei/Project/Promoter Strength Testing
| [[image:NYMU 2009-08-25.png|800px]] || '''Figure 1.''' This is the graph of our promoter strength testing. Since we did not do biological replicates

4 KB (570 words) - 00:00, 22 October 2009
Oxygen Promoter
 Our results can be observed in the graph. The results were appeared as expected. The presence of VHb gene in our E.c

4 KB (637 words) - 22:35, 21 October 2009
Team:Uppsala-Sweden/PLS
''Numerical values for above graph''

3 KB (548 words) - 22:03, 21 October 2009