Team:Warsaw/Calendar-Main/11 July 2009

From 2009.igem.org

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====Strain testing constructs====
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====Creating devices to test promotors in E. coli strains (devices BBa_K177024 and BBa_K177025)====
'''Franek'''
'''Franek'''

Revision as of 23:25, 11 July 2009


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Contents

Gel out phoP/phoQ

Kama

Tasks:

  • Isolation of fragment of the correct lenght(˜2200bp)from the gel was performed with the A&A "Gel-out" kit.

Construction of K177012 operon1_part2

Ania

Tasks:

  • Transformation of chemocompetent strain of E. with BBa_C0012 - lacI repressor on the pSB1A2 ampicillin resistant plasmid taken out of the distribution 200 Kit Plate 1 well 2O.
  • Alkaline lysis of bacterial cultures to obtain plasmids containing following bricks:

BBa_R0051 - promoter (lambda cI regulated); BBa_B0032 - RBS.3 (medium)

  • Digestion to confirm plasmid extraction. DNA that should contain R0051 on pSB1A2 plasmid was digested with PvuI and HindII. Digestion mix contained 5ul of extracted DNA, 2ul of Fermentas BamHI buffer , 0.3ul of each enzyme and water added to obtain 20ul total volume.
DNA sample restriction enzymes expected fragments [bp]
R0051(pcI) on pSB1A2 PvuI HindII 695, 1447


Creating devices to test promotors in E. coli strains (devices BBa_K177024 and BBa_K177025)

Franek

Tasks:

  • Alkaline lysis of bacterial cultures to obtain plasmids containing following bricks:

BBa_R0051 - AraC inhibited promoter BBa_B0032 - LacI inhibited promoter

  • Digestion to confirm plasmid extraction. DNA that should contain pAraC on pSB1A2 plasmid was digested with BamHI PvuI, pLacI on pSB1A2 was digested with IPvuI and PvuII . Digestion mix contained 5ul of extracted DNA, 2ul of Fermentas BamHI buffer , 0.3ul of each enzyme and water added to obtain 20ul total volume.
DNA sample restriction enzymes expected fragments [bp]
LacI on pSB1A2 PvuI PvuII 728, 1351
pArac on pSB1A2 BamHI PvuI 782, 1446


Franek lub Monika opisze minilizy dla Moniki

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